RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 OSTCQ9NRP0 149 aa8.67□□□□□ -1.02
TRA2A-209ENST00000494255 SMIM17P0DL12 118 aa8.66□□□□□ -1.02
TRA2A-209ENST00000494255 SRIP30626 198 aa8.66□□□□□ -1.02
TRA2A-209ENST00000494255 FAM3BP58499 235 aaPredicted RBP8.66□□□□□ -1.02
TRA2A-209ENST00000494255 RPL23P62829 140 aaKnown RBP8.66□□□□□ -1.02
TRA2A-209ENST00000494255 CT83Q5H943 113 aa8.66□□□□□ -1.02
TRA2A-209ENST00000494255 ISOC2Q96AB3 205 aa8.66□□□□□ -1.02
TRA2A-209ENST00000494255 AP1S3Q96PC3 154 aa8.66□□□□□ -1.02
TRA2A-209ENST00000494255 K7EQD1 137 aa8.65□□□□□ -1.02
TRA2A-209ENST00000494255 CRYGDP07320 174 aa8.65□□□□□ -1.02
TRA2A-209ENST00000494255 CTRLP40313 264 aa8.65□□□□□ -1.02
TRA2A-209ENST00000494255 UFSP1Q6NVU6 142 aa8.65□□□□□ -1.02
TRA2A-209ENST00000494255 NEGR1Q7Z3B1 354 aa8.65□□□□□ -1.02
TRA2A-209ENST00000494255 SH2D6Q7Z4S9 175 aa8.65□□□□□ -1.02
TRA2A-209ENST00000494255 LOC100131303A0A0U1RQF7 123 aa8.65□□□□□ -1.03
TRA2A-209ENST00000494255 WDR73Q6P4I2 378 aa8.65□□□□□ -1.03
TRA2A-209ENST00000494255 LINC00588Q9Y4M8 146 aa8.65□□□□□ -1.03
TRA2A-209ENST00000494255 TRGC1P0CF51 173 aa8.64□□□□□ -1.03
TRA2A-209ENST00000494255 ZNF56Q15929 161 aa8.64□□□□□ -1.03
TRA2A-209ENST00000494255 ESRGQ1W209 222 aa8.64□□□□□ -1.03
TRA2A-209ENST00000494255 UQCC3Q6UW78 93 aa8.64□□□□□ -1.03
TRA2A-209ENST00000494255 OR10G8Q8NGN5 311 aa8.64□□□□□ -1.03
TRA2A-209ENST00000494255 ALMS1Q8TCU4 4167 aa8.63□□□□□ -1.03
TRA2A-209ENST00000494255 NTF3P20783 257 aa8.63□□□□□ -1.03
TRA2A-209ENST00000494255 RAB4BP61018 213 aa8.63□□□□□ -1.03
TRA2A-209ENST00000494255 Q6ZSN1 163 aa8.63□□□□□ -1.03
TRA2A-209ENST00000494255 C14orf178Q8N769 122 aaPredicted RBP8.63□□□□□ -1.03
TRA2A-209ENST00000494255 TSKUQ8WUA8 353 aa8.63□□□□□ -1.03
TRA2A-209ENST00000494255 BORCS7Q96B45 105 aa8.63□□□□□ -1.03
TRA2A-209ENST00000494255 GFRA4Q9GZZ7 299 aa8.63□□□□□ -1.03
TRA2A-209ENST00000494255 F5H697 171 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 GTSF1Q8WW33 167 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 PGLYRP4Q96LB8 373 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 MSRB1Q9NZV6 116 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 MRPS16Q9Y3D3 137 aaKnown RBP8.62□□□□□ -1.03
TRA2A-209ENST00000494255 V9GYV3 84 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 FAM231BA6NCW3 169 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 TWIST1Q15672 202 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 COMMD7Q86VX2 200 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
TRA2A-209ENST00000494255 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
TRA2A-209ENST00000494255 GAGE12JA6NER3 117 aa8.61□□□□□ -1.03
TRA2A-209ENST00000494255 MGPP08493 103 aa8.61□□□□□ -1.03
TRA2A-209ENST00000494255 FOXA3P55318 350 aaPredicted RBP8.61□□□□□ -1.03
TRA2A-209ENST00000494255 PNRC1Q12796 327 aaPredicted RBP8.61□□□□□ -1.03
TRA2A-209ENST00000494255 GAGE1Q13065 139 aa8.61□□□□□ -1.03
TRA2A-209ENST00000494255 GAGE4Q13068 117 aa8.61□□□□□ -1.03
TRA2A-209ENST00000494255 GAGE5Q13069 117 aa8.61□□□□□ -1.03
TRA2A-209ENST00000494255 GAGE13Q4V321 117 aa8.61□□□□□ -1.03
TRA2A-209ENST00000494255 SMIM15Q7Z3B0 74 aa8.61□□□□□ -1.03
TRA2A-209ENST00000494255 ZNRF2Q8NHG8 242 aa8.61□□□□□ -1.03
TRA2A-209ENST00000494255 IGLV2-18A0A075B6J9 118 aa8.6□□□□□ -1.03
TRA2A-209ENST00000494255 TRBV10-1A0A0K0K1A3 114 aa8.6□□□□□ -1.03
TRA2A-209ENST00000494255 HIGD1CA8MV81 97 aa8.6□□□□□ -1.03
TRA2A-209ENST00000494255 ATP6V0E2Q8NHE4 81 aa8.6□□□□□ -1.03
TRA2A-209ENST00000494255 UPK3BQ9BT76 320 aa8.6□□□□□ -1.03
TRA2A-209ENST00000494255 DPH3P1Q9H4G8 78 aa8.6□□□□□ -1.03
TRA2A-209ENST00000494255 KIF25-AS1Q9Y6Z4 181 aa8.6□□□□□ -1.03
TRA2A-209ENST00000494255 LYSTQ99698 3801 aa8.6□□□□□ -1.03
TRA2A-209ENST00000494255 LINC00862A6NCI5 91 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 EVI2AP22794 236 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 RPL36AP83881 106 aaKnown RBP8.59□□□□□ -1.03
TRA2A-209ENST00000494255 RPL36ALQ969Q0 106 aaKnown RBP8.59□□□□□ -1.03
TRA2A-209ENST00000494255 A0A1B0GUT8 65 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 TMEM218A2RU14 115 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 H7C1H1 209 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 M0R2N4 97 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 PPP1R2P9O14990 202 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 TIRAPP58753 221 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 Q9H8V8 135 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 NAT8BQ9UHF3 227 aa8.59□□□□□ -1.03
TRA2A-209ENST00000494255 KMT2CQ8NEZ4 4911 aaKnown RBP8.58□□□□□ -1.04
TRA2A-209ENST00000494255 F8W036 122 aa8.58□□□□□ -1.04
TRA2A-209ENST00000494255 LINC00315P59091 139 aa8.58□□□□□ -1.04
TRA2A-209ENST00000494255 RIGQ13278 110 aa8.58□□□□□ -1.04
TRA2A-209ENST00000494255 GTSF1LQ9H1H1 148 aa8.58□□□□□ -1.04
TRA2A-209ENST00000494255 TRBV7-3A0A075B6L6 115 aa8.57□□□□□ -1.04
TRA2A-209ENST00000494255 SMIM27A0A1W2PRY6 76 aa8.57□□□□□ -1.04
TRA2A-209ENST00000494255 MT-ND4LP03901 98 aa8.57□□□□□ -1.04
TRA2A-209ENST00000494255 LINC00694P0DN24 101 aa8.57□□□□□ -1.04
TRA2A-209ENST00000494255 NUP35Q8NFH5 326 aa8.57□□□□□ -1.04
TRA2A-209ENST00000494255 Q9UF83 564 aa8.57□□□□□ -1.04
TRA2A-209ENST00000494255 SIVA1O15304 175 aa8.56□□□□□ -1.04
TRA2A-209ENST00000494255 TTC32Q5I0X7 151 aa8.56□□□□□ -1.04
TRA2A-209ENST00000494255 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.56□□□□□ -1.04
TRA2A-209ENST00000494255 NEXN-AS1Q8NBZ9 246 aa8.56□□□□□ -1.04
TRA2A-209ENST00000494255 DNAH1Q9P2D7 4330 aa8.56□□□□□ -1.04
TRA2A-209ENST00000494255 TRAV8-6A0A0B4J262 113 aa8.56□□□□□ -1.04
TRA2A-209ENST00000494255 NBDYA0A0U1RRE5 68 aa8.56□□□□□ -1.04
TRA2A-209ENST00000494255 SUMO4Q6EEV6 95 aa8.56□□□□□ -1.04
TRA2A-209ENST00000494255 ANAPC16Q96DE5 110 aa8.56□□□□□ -1.04
TRA2A-209ENST00000494255 A0A087WWC5 75 aa8.55□□□□□ -1.04
TRA2A-209ENST00000494255 M0QY20 66 aa8.55□□□□□ -1.04
TRA2A-209ENST00000494255 UBE2D3P61077 147 aa8.55□□□□□ -1.04
TRA2A-209ENST00000494255 UBE2D2P62837 147 aa8.55□□□□□ -1.04
TRA2A-209ENST00000494255 OR10J3Q5JRS4 329 aa8.55□□□□□ -1.04
TRA2A-209ENST00000494255 LELP1Q5T871 98 aa8.55□□□□□ -1.04
TRA2A-209ENST00000494255 SEC11CQ9BY50 192 aa8.55□□□□□ -1.04
TRA2A-209ENST00000494255 TNFRSF18Q9Y5U5 241 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms