RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 IGHG2P01859 326 aa14.77□□□□□ -0.04
COL27A1-207ENST00000494090 TM2D2Q9BX73 214 aa14.77□□□□□ -0.04
COL27A1-207ENST00000494090 TRAV12-1A0A0B4J245 112 aa14.77□□□□□ -0.05
COL27A1-207ENST00000494090 CTRLP40313 264 aa14.77□□□□□ -0.05
COL27A1-207ENST00000494090 INSL3P51460 131 aa14.77□□□□□ -0.05
COL27A1-207ENST00000494090 ANKRD29Q8N6D5 301 aa14.77□□□□□ -0.05
COL27A1-207ENST00000494090 PRAC2D3DTV9 90 aa14.77□□□□□ -0.05
COL27A1-207ENST00000494090 RPL18AQ02543 176 aaKnown RBP14.77□□□□□ -0.05
COL27A1-207ENST00000494090 C4orf3Q8WVX3 66 aa14.77□□□□□ -0.05
COL27A1-207ENST00000494090 MED13Q9UHV7 2174 aa14.76□□□□□ -0.05
COL27A1-207ENST00000494090 CLPSL1A2RUU4 121 aa14.76□□□□□ -0.05
COL27A1-207ENST00000494090 Q8N7P7 452 aa14.76□□□□□ -0.05
COL27A1-207ENST00000494090 TIRAPP58753 221 aa14.76□□□□□ -0.05
COL27A1-207ENST00000494090 MSMPQ1L6U9 139 aa14.76□□□□□ -0.05
COL27A1-207ENST00000494090 HIGD1BQ9P298 99 aa14.75□□□□□ -0.05
COL27A1-207ENST00000494090 TINCRA0A1B0GVN0 87 aa14.75□□□□□ -0.05
COL27A1-207ENST00000494090 ZNF106Q9H2Y7 1883 aaKnown RBP14.75□□□□□ -0.05
COL27A1-207ENST00000494090 NCKAP5O14513 1909 aa14.75□□□□□ -0.05
COL27A1-207ENST00000494090 ACYP1P07311 99 aa14.75□□□□□ -0.05
COL27A1-207ENST00000494090 BAALC-AS2P0C853 105 aa14.75□□□□□ -0.05
COL27A1-207ENST00000494090 SPANXCQ9NY87 97 aa14.74□□□□□ -0.05
COL27A1-207ENST00000494090 PRB1P04280 392 aa14.74□□□□□ -0.05
COL27A1-207ENST00000494090 CXCL5P42830 114 aa14.74□□□□□ -0.05
COL27A1-207ENST00000494090 C19orf71A6NCJ1 209 aa14.74□□□□□ -0.05
COL27A1-207ENST00000494090 TRBV7-3A0A075B6L6 115 aa14.73□□□□□ -0.05
COL27A1-207ENST00000494090 COX7B2Q8TF08 81 aa14.73□□□□□ -0.05
COL27A1-207ENST00000494090 NDUFA1O15239 70 aa14.73□□□□□ -0.05
COL27A1-207ENST00000494090 A0A0J9YXV3 536 aa14.72□□□□□ -0.05
COL27A1-207ENST00000494090 HIST2H2BCQ6DN03 193 aa14.72□□□□□ -0.05
COL27A1-207ENST00000494090 TOMM6Q96B49 74 aa14.72□□□□□ -0.05
COL27A1-207ENST00000494090 SIRPDQ9H106 197 aa14.72□□□□□ -0.05
COL27A1-207ENST00000494090 SND1-IT1Q9HBX3 110 aa14.72□□□□□ -0.05
COL27A1-207ENST00000494090 ZGRF1Q86YA3 2104 aa14.72□□□□□ -0.05
COL27A1-207ENST00000494090 C15orf53Q8NAA6 179 aa14.72□□□□□ -0.05
COL27A1-207ENST00000494090 KLK5Q9Y337 293 aaPredicted RBP14.72□□□□□ -0.05
COL27A1-207ENST00000494090 FRMD6-AS1P0C7T7 363 aa14.72□□□□□ -0.05
COL27A1-207ENST00000494090 ZFP36P26651 326 aaKnown RBP14.72□□□□□ -0.05
COL27A1-207ENST00000494090 PCNX2A6NKB5 2137 aa14.72□□□□□ -0.05
COL27A1-207ENST00000494090 HHLA3Q9XRX5 114 aa14.71□□□□□ -0.05
COL27A1-207ENST00000494090 Q8N1Y9 231 aa14.71□□□□□ -0.05
COL27A1-207ENST00000494090 LINC00574Q9H8X3 128 aa14.71□□□□□ -0.05
COL27A1-207ENST00000494090 TRACP01848 142 aa14.71□□□□□ -0.06
COL27A1-207ENST00000494090 OPRPNQ99935 248 aaPredicted RBP14.71□□□□□ -0.06
COL27A1-207ENST00000494090 IGHV3-30P01768 117 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 IGHV3-33P01772 117 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 IGHV3-30-3P0DP02 117 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 IGHV3-30-5P0DP03 117 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 IGKV1D-37A0A075B6S9 117 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 Q6ZPA2 131 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 DEFB105AQ8NG35 78 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 SMAD5-AS1Q9Y6J3 95 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 NDUFS5O43920 106 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 MUSTN1Q8IVN3 82 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 CRIP3Q6Q6R5 217 aa14.7□□□□□ -0.06
COL27A1-207ENST00000494090 F8W735 103 aaPredicted RBP14.69□□□□□ -0.06
COL27A1-207ENST00000494090 TIMM17AQ99595 171 aa14.69□□□□□ -0.06
COL27A1-207ENST00000494090 LOXL1Q08397 574 aaPredicted RBP14.69□□□□□ -0.06
COL27A1-207ENST00000494090 IL17DQ8TAD2 202 aa14.69□□□□□ -0.06
COL27A1-207ENST00000494090 BAALCQ8WXS3 180 aa14.69□□□□□ -0.06
COL27A1-207ENST00000494090 FXYD2P54710 66 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 FANCD2OSQ96PS1 177 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 C2orf16Q68DN1 1984 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 A4D1N5 150 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 BRWD1-AS2P59051 145 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 LRRC75A-AS1Q8N1F1 130 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 A6NDX4 124 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 OBSL1O75147 1896 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 NDUFB1O75438 58 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 IGLV10-54A0A075B6I4 117 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 CRYBA4P53673 196 aa14.68□□□□□ -0.06
COL27A1-207ENST00000494090 LTBP2Q14767 1821 aa14.67□□□□□ -0.06
COL27A1-207ENST00000494090 E9PLD3 99 aa14.67□□□□□ -0.06
COL27A1-207ENST00000494090 PROP1O75360 226 aa14.67□□□□□ -0.06
COL27A1-207ENST00000494090 WISP2O76076 250 aa14.67□□□□□ -0.06
COL27A1-207ENST00000494090 TAX1BP3O14907 124 aa14.67□□□□□ -0.06
COL27A1-207ENST00000494090 RPL39P62891 51 aaKnown RBP14.67□□□□□ -0.06
COL27A1-207ENST00000494090 A0A1B0GXF2 115 aa14.66□□□□□ -0.06
COL27A1-207ENST00000494090 TNFRSF13BO14836 293 aaPredicted RBP14.66□□□□□ -0.06
COL27A1-207ENST00000494090 ZNF295-AS1Q8N0V1 137 aa14.66□□□□□ -0.06
COL27A1-207ENST00000494090 MED13LQ71F56 2210 aa14.66□□□□□ -0.06
COL27A1-207ENST00000494090 ODF1Q14990 250 aa14.65□□□□□ -0.06
COL27A1-207ENST00000494090 TMEM263Q8WUH6 116 aaKnown RBP14.65□□□□□ -0.06
COL27A1-207ENST00000494090 TRBV10-1A0A0K0K1A3 114 aa14.65□□□□□ -0.06
COL27A1-207ENST00000494090 NRGNQ92686 78 aa14.65□□□□□ -0.06
COL27A1-207ENST00000494090 IGLV2-8P01709 118 aa14.65□□□□□ -0.06
COL27A1-207ENST00000494090 TTTY13Q9BZ97 58 aa14.64□□□□□ -0.07
COL27A1-207ENST00000494090 FAM208BQ5VWN6 2430 aa14.64□□□□□ -0.07
COL27A1-207ENST00000494090 KIAA1549LQ6ZVL6 1849 aa14.64□□□□□ -0.07
COL27A1-207ENST00000494090 TMEM131Q92545 1883 aa14.64□□□□□ -0.07
COL27A1-207ENST00000494090 C11orf86A6NJI1 115 aa14.64□□□□□ -0.07
COL27A1-207ENST00000494090 PRO0255Q9UI72 69 aa14.63□□□□□ -0.07
COL27A1-207ENST00000494090 A0A0J9YX75 114 aa14.63□□□□□ -0.07
COL27A1-207ENST00000494090 DEFB135Q30KP9 77 aa14.63□□□□□ -0.07
COL27A1-207ENST00000494090 EIF4EBP1Q13541 118 aaPredicted RBP14.62□□□□□ -0.07
COL27A1-207ENST00000494090 SPATA12Q7Z6I5 190 aa14.62□□□□□ -0.07
COL27A1-207ENST00000494090 CITED2Q99967 270 aaPredicted RBP14.62□□□□□ -0.07
COL27A1-207ENST00000494090 TMEM258P61165 79 aa14.62□□□□□ -0.07
COL27A1-207ENST00000494090 VSIG2Q96IQ7 327 aa14.62□□□□□ -0.07
COL27A1-207ENST00000494090 TNRC6AQ8NDV7 1962 aaKnown RBP14.62□□□□□ -0.07
COL27A1-207ENST00000494090 UBE2AP49459 152 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms