RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 DPH3P1Q9H4G8 78 aa10.6□□□□□ -0.71
ACTB-213ENST00000493945 DNAH9Q9NYC9 4486 aa10.59□□□□□ -0.71
ACTB-213ENST00000493945 H7C1H1 209 aa10.59□□□□□ -0.71
ACTB-213ENST00000493945 SSTP61278 116 aa10.59□□□□□ -0.71
ACTB-213ENST00000493945 ZNF56Q15929 161 aa10.59□□□□□ -0.71
ACTB-213ENST00000493945 COX19Q49B96 90 aa10.59□□□□□ -0.71
ACTB-213ENST00000493945 CFAP126Q5VTH2 177 aa10.59□□□□□ -0.71
ACTB-213ENST00000493945 RASL11AQ6T310 242 aa10.59□□□□□ -0.71
ACTB-213ENST00000493945 MUC21A0A0G2JKD1 596 aa10.58□□□□□ -0.72
ACTB-213ENST00000493945 MUC21A0A140T8X8 626 aa10.58□□□□□ -0.72
ACTB-213ENST00000493945 IGHV3-53P01767 116 aa10.58□□□□□ -0.72
ACTB-213ENST00000493945 PHLDA1Q8WV24 401 aaPredicted RBP10.58□□□□□ -0.72
ACTB-213ENST00000493945 PRADC1Q9BSG0 188 aa10.58□□□□□ -0.72
ACTB-213ENST00000493945 PRO0255Q9UI72 69 aa10.58□□□□□ -0.72
ACTB-213ENST00000493945 COL7A1Q02388 2944 aa10.58□□□□□ -0.72
ACTB-213ENST00000493945 F5H697 171 aa10.57□□□□□ -0.72
ACTB-213ENST00000493945 MGPP08493 103 aa10.57□□□□□ -0.72
ACTB-213ENST00000493945 RHOHQ15669 191 aa10.57□□□□□ -0.72
ACTB-213ENST00000493945 ZNF575Q86XF7 245 aa10.57□□□□□ -0.72
ACTB-213ENST00000493945 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.57□□□□□ -0.72
ACTB-213ENST00000493945 MUC7Q8TAX7 377 aa10.57□□□□□ -0.72
ACTB-213ENST00000493945 FRZBQ92765 325 aa10.57□□□□□ -0.72
ACTB-213ENST00000493945 HUWE1Q7Z6Z7 4374 aaKnown RBP10.56□□□□□ -0.72
ACTB-213ENST00000493945 TCTAP57738 103 aa10.56□□□□□ -0.72
ACTB-213ENST00000493945 RAB4BP61018 213 aa10.56□□□□□ -0.72
ACTB-213ENST00000493945 MRPL54Q6P161 138 aaKnown RBP10.56□□□□□ -0.72
ACTB-213ENST00000493945 C14orf178Q8N769 122 aaPredicted RBP10.56□□□□□ -0.72
ACTB-213ENST00000493945 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
ACTB-213ENST00000493945 ZNF479Q96JC4 524 aa10.56□□□□□ -0.72
ACTB-213ENST00000493945 TMEM191AQ9H0A3 160 aa10.56□□□□□ -0.72
ACTB-213ENST00000493945 SMCO4Q9NRQ5 59 aa10.56□□□□□ -0.72
ACTB-213ENST00000493945 A0A087WWL8 130 aa10.55□□□□□ -0.72
ACTB-213ENST00000493945 TRBV6-4A0A1B0GX49 114 aa10.55□□□□□ -0.72
ACTB-213ENST00000493945 H3BNG1 76 aa10.55□□□□□ -0.72
ACTB-213ENST00000493945 ATP6V1G1O75348 118 aa10.55□□□□□ -0.72
ACTB-213ENST00000493945 CAMPP49913 170 aa10.55□□□□□ -0.72
ACTB-213ENST00000493945 FAM3BP58499 235 aaPredicted RBP10.55□□□□□ -0.72
ACTB-213ENST00000493945 HHLA3Q9XRX5 114 aa10.55□□□□□ -0.72
ACTB-213ENST00000493945 URGCP-MRPS24S4R325 110 aa10.55□□□□□ -0.72
ACTB-213ENST00000493945 C3orf84H3BNL1 204 aa10.54□□□□□ -0.72
ACTB-213ENST00000493945 K7EQD1 137 aa10.54□□□□□ -0.72
ACTB-213ENST00000493945 PAX4O43316 350 aa10.54□□□□□ -0.72
ACTB-213ENST00000493945 PPP1R17O96001 155 aa10.54□□□□□ -0.72
ACTB-213ENST00000493945 CEMP1Q6PRD7 247 aaPredicted RBP10.54□□□□□ -0.72
ACTB-213ENST00000493945 SH2D6Q7Z4S9 175 aa10.54□□□□□ -0.72
ACTB-213ENST00000493945 NACAE9PAV3 2078 aa10.53□□□□□ -0.72
ACTB-213ENST00000493945 TRBV10-1A0A0K0K1A3 114 aa10.53□□□□□ -0.72
ACTB-213ENST00000493945 MT-ND6P03923 174 aa10.53□□□□□ -0.72
ACTB-213ENST00000493945 CRYGDP07320 174 aa10.53□□□□□ -0.72
ACTB-213ENST00000493945 GATA1P15976 413 aaPredicted RBP10.53□□□□□ -0.72
ACTB-213ENST00000493945 EVI2AP22794 236 aa10.53□□□□□ -0.72
ACTB-213ENST00000493945 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
ACTB-213ENST00000493945 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
ACTB-213ENST00000493945 IGHV3-73A0A0B4J1V6 119 aa10.52□□□□□ -0.73
ACTB-213ENST00000493945 A0A1B0GXF2 115 aa10.52□□□□□ -0.73
ACTB-213ENST00000493945 HLA-DQA1P01909 254 aa10.52□□□□□ -0.73
ACTB-213ENST00000493945 FHL2Q14192 279 aa10.52□□□□□ -0.73
ACTB-213ENST00000493945 POM121L12Q8N7R1 296 aa10.52□□□□□ -0.73
ACTB-213ENST00000493945 MRAP2Q96G30 205 aa10.52□□□□□ -0.73
ACTB-213ENST00000493945 JPT2Q9H910 190 aa10.52□□□□□ -0.73
ACTB-213ENST00000493945 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.73
ACTB-213ENST00000493945 CRYBA4P53673 196 aa10.51□□□□□ -0.73
ACTB-213ENST00000493945 RPL36AP83881 106 aaKnown RBP10.51□□□□□ -0.73
ACTB-213ENST00000493945 MRPL23Q16540 153 aaKnown RBP10.51□□□□□ -0.73
ACTB-213ENST00000493945 RPL36ALQ969Q0 106 aaKnown RBP10.51□□□□□ -0.73
ACTB-213ENST00000493945 SAMD10Q9BYL1 202 aa10.51□□□□□ -0.73
ACTB-213ENST00000493945 TGP01266 2768 aa10.51□□□□□ -0.73
ACTB-213ENST00000493945 TRBV24-1A0A075B6N3 115 aa10.5□□□□□ -0.73
ACTB-213ENST00000493945 IGLL5B9A064 214 aa10.5□□□□□ -0.73
ACTB-213ENST00000493945 PPBPP02775 128 aa10.5□□□□□ -0.73
ACTB-213ENST00000493945 HOXA5P20719 270 aa10.5□□□□□ -0.73
ACTB-213ENST00000493945 SRIP30626 198 aa10.5□□□□□ -0.73
ACTB-213ENST00000493945 UFSP1Q6NVU6 142 aa10.5□□□□□ -0.73
ACTB-213ENST00000493945 TMEM88Q6PEY1 159 aa10.5□□□□□ -0.73
ACTB-213ENST00000493945 GATD1Q8NB37 220 aa10.5□□□□□ -0.73
ACTB-213ENST00000493945 FAM104BQ5XKR9 115 aa10.49□□□□□ -0.73
ACTB-213ENST00000493945 SLC25A29Q8N8R3 303 aa10.49□□□□□ -0.73
ACTB-213ENST00000493945 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
ACTB-213ENST00000493945 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
ACTB-213ENST00000493945 KIF25-AS1Q9Y6Z4 181 aa10.49□□□□□ -0.73
ACTB-213ENST00000493945 A0A0J9YY99 117 aa10.48□□□□□ -0.73
ACTB-213ENST00000493945 GYPEP15421 78 aa10.48□□□□□ -0.73
ACTB-213ENST00000493945 ELOBQ15370 118 aa10.48□□□□□ -0.73
ACTB-213ENST00000493945 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
ACTB-213ENST00000493945 AMN1Q8IY45 258 aa10.48□□□□□ -0.73
ACTB-213ENST00000493945 GNB1LQ9BYB4 327 aa10.48□□□□□ -0.73
ACTB-213ENST00000493945 NUDT3O95989 172 aa10.47□□□□□ -0.73
ACTB-213ENST00000493945 CKS2P33552 79 aa10.47□□□□□ -0.73
ACTB-213ENST00000493945 ZFAND6Q6FIF0 208 aa10.47□□□□□ -0.73
ACTB-213ENST00000493945 ATRAIDQ6UW56 229 aa10.47□□□□□ -0.73
ACTB-213ENST00000493945 TRBV7-3A0A075B6L6 115 aa10.46□□□□□ -0.73
ACTB-213ENST00000493945 RAB4AP20338 218 aa10.46□□□□□ -0.73
ACTB-213ENST00000493945 TMEM97Q5BJF2 176 aa10.46□□□□□ -0.73
ACTB-213ENST00000493945 OR10J3Q5JRS4 329 aa10.46□□□□□ -0.73
ACTB-213ENST00000493945 NEGR1Q7Z3B1 354 aa10.46□□□□□ -0.73
ACTB-213ENST00000493945 CBLN2Q8IUK8 224 aa10.46□□□□□ -0.73
ACTB-213ENST00000493945 ORMDL3Q8N138 153 aa10.46□□□□□ -0.73
ACTB-213ENST00000493945 NIT2Q9NQR4 276 aa10.46□□□□□ -0.73
ACTB-213ENST00000493945 LAMTOR2Q9Y2Q5 125 aa10.46□□□□□ -0.73
ACTB-213ENST00000493945 TGIF2-C20orf24A0A0A6YYL0 155 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 249.8 ms