RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 ZNF56Q15929 161 aa11.1□□□□□ -0.63
HPS4-216ENST00000493455 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 NUPR2A6NF83 97 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 F5H697 171 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 FOXA3P55318 350 aaPredicted RBP11.09□□□□□ -0.63
HPS4-216ENST00000493455 RIGQ13278 110 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 FHL2Q14192 279 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 PIK3CD-AS1Q5SR53 167 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 TMEM88Q6PEY1 159 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 KCNIP4Q6PIL6 250 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
HPS4-216ENST00000493455 SMIM15Q7Z3B0 74 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 C18orf15Q96N68 181 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 NDUFAF3Q9BU61 184 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 URGCP-MRPS24S4R325 110 aa11.09□□□□□ -0.63
HPS4-216ENST00000493455 CRYGDP07320 174 aa11.08□□□□□ -0.64
HPS4-216ENST00000493455 EVI2AP22794 236 aa11.08□□□□□ -0.64
HPS4-216ENST00000493455 CAMPP49913 170 aa11.08□□□□□ -0.64
HPS4-216ENST00000493455 WDR73Q6P4I2 378 aa11.08□□□□□ -0.64
HPS4-216ENST00000493455 IGHV4-4A0A075B6R2 117 aa11.07□□□□□ -0.64
HPS4-216ENST00000493455 RHODO00212 210 aa11.07□□□□□ -0.64
HPS4-216ENST00000493455 S100PP25815 95 aa11.07□□□□□ -0.64
HPS4-216ENST00000493455 ATRAIDQ6UW56 229 aa11.07□□□□□ -0.64
HPS4-216ENST00000493455 CNFNQ9BYD5 112 aa11.07□□□□□ -0.64
HPS4-216ENST00000493455 HHLA3Q9XRX5 114 aa11.07□□□□□ -0.64
HPS4-216ENST00000493455 KLK5Q9Y337 293 aaPredicted RBP11.07□□□□□ -0.64
HPS4-216ENST00000493455 A0A087WWC5 75 aa11.06□□□□□ -0.64
HPS4-216ENST00000493455 PAX4O43316 350 aa11.06□□□□□ -0.64
HPS4-216ENST00000493455 NUDT3O95989 172 aa11.06□□□□□ -0.64
HPS4-216ENST00000493455 DPH3P1Q9H4G8 78 aa11.06□□□□□ -0.64
HPS4-216ENST00000493455 PRO0255Q9UI72 69 aa11.06□□□□□ -0.64
HPS4-216ENST00000493455 GATA1P15976 413 aaPredicted RBP11.05□□□□□ -0.64
HPS4-216ENST00000493455 CRYBA4P53673 196 aa11.05□□□□□ -0.64
HPS4-216ENST00000493455 ZFP2Q6ZN57 461 aa11.05□□□□□ -0.64
HPS4-216ENST00000493455 Q6ZSN1 163 aa11.05□□□□□ -0.64
HPS4-216ENST00000493455 LOC100131303A0A0U1RQF7 123 aa11.04□□□□□ -0.64
HPS4-216ENST00000493455 C3orf84H3BNL1 204 aa11.04□□□□□ -0.64
HPS4-216ENST00000493455 RAB4BP61018 213 aa11.04□□□□□ -0.64
HPS4-216ENST00000493455 HBBP68871 147 aa11.04□□□□□ -0.64
HPS4-216ENST00000493455 UFSP1Q6NVU6 142 aa11.04□□□□□ -0.64
HPS4-216ENST00000493455 SLC25A29Q8N8R3 303 aa11.04□□□□□ -0.64
HPS4-216ENST00000493455 KIF25-AS1Q9Y6Z4 181 aa11.04□□□□□ -0.64
HPS4-216ENST00000493455 A0A096LPF7 62 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 K7EQD1 137 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 CIDEAO60543 219 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 ATP6V1G1O75348 118 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 P0DMU3 169 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 FAM231AP0DMU4 169 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 FAM231CP0DMU5 169 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 GYPEP15421 78 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 SLAQ13239 276 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 CASC10Q5T4H9 136 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 VSIG2Q96IQ7 327 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 BTF3L4Q96K17 158 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 IMMP2LQ96T52 175 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 PRADC1Q9BSG0 188 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 TMEM242Q9NWH2 141 aa11.03□□□□□ -0.64
HPS4-216ENST00000493455 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
HPS4-216ENST00000493455 S100A8P05109 93 aa11.02□□□□□ -0.65
HPS4-216ENST00000493455 RHOHQ15669 191 aa11.02□□□□□ -0.65
HPS4-216ENST00000493455 SUMO4Q6EEV6 95 aa11.02□□□□□ -0.65
HPS4-216ENST00000493455 AMN1Q8IY45 258 aa11.02□□□□□ -0.65
HPS4-216ENST00000493455 A0A1B0GW15 77 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 GAGE12JA6NER3 117 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 GAGE1Q13065 139 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 GAGE4Q13068 117 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 GAGE5Q13069 117 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 GAGE13Q4V321 117 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 ATP5L2Q7Z4Y8 100 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 CBLN2Q8IUK8 224 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 TMEM191AQ9H0A3 160 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 ICOSQ9Y6W8 199 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 DNAH7Q8WXX0 4024 aa11.01□□□□□ -0.65
HPS4-216ENST00000493455 TRBV6-4A0A1B0GX49 114 aa11□□□□□ -0.65
HPS4-216ENST00000493455 A0A1B0GXF2 115 aa11□□□□□ -0.65
HPS4-216ENST00000493455 LINC00315P59091 139 aa11□□□□□ -0.65
HPS4-216ENST00000493455 TGIF2-C20orf24A0A0A6YYL0 155 aa10.99□□□□□ -0.65
HPS4-216ENST00000493455 SRIP30626 198 aa10.99□□□□□ -0.65
HPS4-216ENST00000493455 C15orf53Q8NAA6 179 aa10.99□□□□□ -0.65
HPS4-216ENST00000493455 FAM210BQ96KR6 192 aa10.99□□□□□ -0.65
HPS4-216ENST00000493455 Q9UF83 564 aa10.99□□□□□ -0.65
HPS4-216ENST00000493455 APLNQ9ULZ1 77 aa10.99□□□□□ -0.65
HPS4-216ENST00000493455 TRAV9-1A0A075B6T8 112 aa10.98□□□□□ -0.65
HPS4-216ENST00000493455 SMKR1H3BMG3 65 aa10.98□□□□□ -0.65
HPS4-216ENST00000493455 SCO1O75880 301 aa10.98□□□□□ -0.65
HPS4-216ENST00000493455 NCR2O95944 276 aa10.98□□□□□ -0.65
HPS4-216ENST00000493455 ZNRF2Q8NHG8 242 aa10.98□□□□□ -0.65
HPS4-216ENST00000493455 RNF185Q96GF1 192 aa10.98□□□□□ -0.65
HPS4-216ENST00000493455 H7C1H1 209 aa10.97□□□□□ -0.65
HPS4-216ENST00000493455 RAB4AP20338 218 aa10.97□□□□□ -0.65
HPS4-216ENST00000493455 ELOBQ15370 118 aa10.97□□□□□ -0.65
HPS4-216ENST00000493455 MRPL23Q16540 153 aaKnown RBP10.97□□□□□ -0.65
HPS4-216ENST00000493455 FAM104BQ5XKR9 115 aa10.97□□□□□ -0.65
HPS4-216ENST00000493455 GATD1Q8NB37 220 aa10.97□□□□□ -0.65
HPS4-216ENST00000493455 NEXN-AS1Q8NBZ9 246 aa10.97□□□□□ -0.65
HPS4-216ENST00000493455 SMCO4Q9NRQ5 59 aa10.97□□□□□ -0.65
HPS4-216ENST00000493455 RPL36AP83881 106 aaKnown RBP10.96□□□□□ -0.65
HPS4-216ENST00000493455 MRPL51Q4U2R6 128 aaKnown RBP10.96□□□□□ -0.65
HPS4-216ENST00000493455 RASL11AQ6T310 242 aa10.96□□□□□ -0.65
HPS4-216ENST00000493455 RPL36ALQ969Q0 106 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms