RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 RPP21Q9H633 154 aaKnown RBP4.92□□□□□ -1.62
TPR-208ENST00000492973 SMCO4Q9NRQ5 59 aa4.92□□□□□ -1.62
TPR-208ENST00000492973 XCL2Q9UBD3 114 aa4.92□□□□□ -1.62
TPR-208ENST00000492973 TP53TG1Q9Y2A0 90 aa4.92□□□□□ -1.62
TPR-208ENST00000492973 TMSB15BA0A087X1C1 80 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 SMIM27A0A1W2PRY6 76 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 COLCA2A8K830 154 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 A8MWL6 223 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 GNRH2O43555 120 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 ORM1P02763 201 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 RBMY1A1P0DJD3 496 aaKnown RBP4.91□□□□□ -1.62
TPR-208ENST00000492973 RBMY1CP0DJD4 496 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 GZMBP10144 247 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 ELOBQ15370 118 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 RBMY1FQ15415 496 aaKnown RBP4.91□□□□□ -1.62
TPR-208ENST00000492973 C1orf158Q8N1D5 194 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 TSKUQ8WUA8 353 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 GTSF1Q8WW33 167 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 RCHY1Q96PM5 261 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 PYGO2Q9BRQ0 406 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 U3KQK5 164 aa4.91□□□□□ -1.62
TPR-208ENST00000492973 DYNC2H1Q8NCM8 4307 aaKnown RBP4.91□□□□□ -1.62
TPR-208ENST00000492973 GRIFINA4D1Z8 144 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 FAM231BA6NCW3 169 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 AMBPP02760 352 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 RPS20P60866 119 aaKnown RBP4.9□□□□□ -1.63
TPR-208ENST00000492973 NUTF2P61970 127 aaKnown RBP4.9□□□□□ -1.63
TPR-208ENST00000492973 TDRG1Q3Y452 100 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 MUC21Q5SSG8 566 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 DNLZQ5SXM8 178 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 NUP35Q8NFH5 326 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 OR11H2Q8NH07 326 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 C20orf144Q9BQM9 153 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 GFRA4Q9GZZ7 299 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 URGCP-MRPS24S4R325 110 aa4.9□□□□□ -1.63
TPR-208ENST00000492973 TRBV24-1A0A075B6N3 115 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 TRAV9-1A0A075B6T8 112 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 IGHV1OR15-1A0A075B7D0 117 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 TGIF2-C20orf24A0A0A6YYL0 155 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 XKRY2A2RUG3 117 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 HIGD1CA8MV81 97 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 PRM2P04554 102 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 CXCL1P09341 107 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 IGLC6P0CF74 106 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 S100PP25815 95 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 TCL1AP56279 114 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 KCNIP4Q6PIL6 250 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 FAM159AQ6UWV7 190 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 ZNF705AQ6ZN79 300 aaPredicted RBP4.89□□□□□ -1.63
TPR-208ENST00000492973 KCNS1Q96KK3 526 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 PGLYRP4Q96LB8 373 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 LINC01587Q99440 93 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 LINC00467Q9BRT7 94 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 EDA2RQ9HAV5 297 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 NAT8BQ9UHF3 227 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 TP53TG3Q9ULZ0 132 aa4.89□□□□□ -1.63
TPR-208ENST00000492973 A0A1W2PPQ1 181 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 SPINK4O60575 86 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 INSP01308 110 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 TYMSP04818 313 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 RNASE3P12724 160 aaKnown RBP4.88□□□□□ -1.63
TPR-208ENST00000492973 LYZL1Q6UWQ5 148 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 Q8NAQ8 132 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 BTF3L4Q96K17 158 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 FAM210BQ96KR6 192 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 NAGKQ9UJ70 344 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 GOLT1BQ9Y3E0 138 aa4.88□□□□□ -1.63
TPR-208ENST00000492973 IGHV3OR16-12A0A075B7B8 117 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 IGHV3-16A0A0C4DH30 117 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 A0A0J9YWU9 116 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 F2Z2F3 143 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 DEFB4AO15263 64 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 SNAI2O43623 268 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 OR5AL1P0C617 328 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 ARMS2P0C7Q2 107 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 AZU1P20160 251 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 TMEM256Q8N2U0 113 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 FER1L6-AS1Q8NA97 138 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 SCRT2Q9NQ03 307 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 MDFICQ9P1T7 246 aa4.87□□□□□ -1.63
TPR-208ENST00000492973 IGHV4-4A0A075B6R2 117 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 MUC21A0A0G2JKD1 596 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 MUC21A0A140T8X8 626 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 A0A1B0GUT8 65 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 A0A1B0GXF2 115 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 SMIM9A6NGZ8 99 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 SCGB1D1O95968 90 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 MIFP14174 115 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 HTN1P15515 57 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 NTF3P20783 257 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 CTRLP40313 264 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 ASIPP42127 132 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 MRPL54Q6P161 138 aaKnown RBP4.86□□□□□ -1.63
TPR-208ENST00000492973 NFE4Q86UQ8 179 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 C9orf85Q96MD7 179 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 TMEM208Q9BTX3 173 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 C11orf68Q9H3H3 251 aaKnown RBP4.86□□□□□ -1.63
TPR-208ENST00000492973 SACSQ9NZJ4 4579 aa4.86□□□□□ -1.63
TPR-208ENST00000492973 KMT2CQ8NEZ4 4911 aaKnown RBP4.86□□□□□ -1.63
TPR-208ENST00000492973 CSMD3Q7Z407 3707 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms