RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 GAGE12GP0CL81 117 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 GAGE12IP0CL82 117 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 ARL3P36405 182 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 GAGE4Q13068 117 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 LINC01620Q4KN68 170 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 SUMO4Q6EEV6 95 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 CCDC179H3BU77 68 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 VCYO14598 125 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 IFITM1P13164 125 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 ATXN8Q156A1 80 aa11.11□□□□□ -0.63
PABPC4-216ENST00000492468 BSNQ9UPA5 3926 aa11.1□□□□□ -0.63
PABPC4-216ENST00000492468 TMEM223A0PJW6 202 aa11.1□□□□□ -0.63
PABPC4-216ENST00000492468 RNASE4P34096 147 aaKnown RBP11.1□□□□□ -0.63
PABPC4-216ENST00000492468 DEFB1P60022 68 aa11.1□□□□□ -0.63
PABPC4-216ENST00000492468 Q8NA96 180 aa11.1□□□□□ -0.63
PABPC4-216ENST00000492468 DCHS2Q6V1P9 2916 aa11.1□□□□□ -0.63
PABPC4-216ENST00000492468 LINC01560Q8TB33 94 aa11.1□□□□□ -0.63
PABPC4-216ENST00000492468 DEFB104AQ8WTQ1 72 aa11.1□□□□□ -0.63
PABPC4-216ENST00000492468 LAMA5O15230 3695 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 CACNA1BQ00975 2339 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 TRBV27A0A0K0K1C4 114 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 MUSTN1Q8IVN3 82 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 OTOGLQ3ZCN5 2332 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.09□□□□□ -0.63
PABPC4-216ENST00000492468 TRAV2A0A0B4J234 112 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 TRBV7-9A0A0J9YWB2 115 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 H7C2G1 150 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 IGHV1-69P01742 117 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 TTC32Q5I0X7 151 aa11.09□□□□□ -0.63
PABPC4-216ENST00000492468 ANKRD11Q6UB99 2663 aaPredicted RBP11.08□□□□□ -0.64
PABPC4-216ENST00000492468 TRAV8-4A0A0B4J246 113 aa11.08□□□□□ -0.64
PABPC4-216ENST00000492468 A0A0J9YX75 114 aa11.08□□□□□ -0.64
PABPC4-216ENST00000492468 TRBV6-5A0A0K0K1A5 114 aa11.08□□□□□ -0.64
PABPC4-216ENST00000492468 TRBV10-2A0A0K0K1G8 114 aa11.08□□□□□ -0.64
PABPC4-216ENST00000492468 TCF15Q12870 199 aa11.08□□□□□ -0.64
PABPC4-216ENST00000492468 SIRPDQ9H106 197 aa11.08□□□□□ -0.64
PABPC4-216ENST00000492468 ANKHD1Q8IWZ3 2542 aaKnown RBP11.08□□□□□ -0.64
PABPC4-216ENST00000492468 TRBV30A0A0K0K1B3 111 aa11.07□□□□□ -0.64
PABPC4-216ENST00000492468 TEX49A0A1B0GTD5 131 aa11.07□□□□□ -0.64
PABPC4-216ENST00000492468 JPT2Q9H910 190 aa11.07□□□□□ -0.64
PABPC4-216ENST00000492468 M0R2P5 195 aa11.07□□□□□ -0.64
PABPC4-216ENST00000492468 C15orf53Q8NAA6 179 aa11.07□□□□□ -0.64
PABPC4-216ENST00000492468 FAM110AQ9BQ89 295 aa11.07□□□□□ -0.64
PABPC4-216ENST00000492468 DMXL1Q9Y485 3027 aa11.06□□□□□ -0.64
PABPC4-216ENST00000492468 H3BMM0 161 aa11.06□□□□□ -0.64
PABPC4-216ENST00000492468 UBE2WQ96B02 151 aa11.06□□□□□ -0.64
PABPC4-216ENST00000492468 F6UB75 175 aa11.06□□□□□ -0.64
PABPC4-216ENST00000492468 LGALS9O00182 355 aa11.06□□□□□ -0.64
PABPC4-216ENST00000492468 IGHV4-39P01824 125 aa11.06□□□□□ -0.64
PABPC4-216ENST00000492468 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
PABPC4-216ENST00000492468 ZFP36P26651 326 aaKnown RBP11.06□□□□□ -0.64
PABPC4-216ENST00000492468 Q1RN00 199 aa11.06□□□□□ -0.64
PABPC4-216ENST00000492468 NSUN5P1Q3KNT7 163 aa11.06□□□□□ -0.64
PABPC4-216ENST00000492468 CACNA1HO95180 2353 aa11.06□□□□□ -0.64
PABPC4-216ENST00000492468 EP300Q09472 2414 aaPredicted RBP11.06□□□□□ -0.64
PABPC4-216ENST00000492468 TRIAP1O43715 76 aa11.05□□□□□ -0.64
PABPC4-216ENST00000492468 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
PABPC4-216ENST00000492468 A0A087WWL8 130 aa11.05□□□□□ -0.64
PABPC4-216ENST00000492468 ACACAQ13085 2346 aa11.05□□□□□ -0.64
PABPC4-216ENST00000492468 RHOHQ15669 191 aa11.04□□□□□ -0.64
PABPC4-216ENST00000492468 PRR30Q53SZ7 412 aaPredicted RBP11.04□□□□□ -0.64
PABPC4-216ENST00000492468 C19orf54Q5BKX5 351 aa11.04□□□□□ -0.64
PABPC4-216ENST00000492468 OPRPNQ99935 248 aaPredicted RBP11.04□□□□□ -0.64
PABPC4-216ENST00000492468 A0A0J9YXY3 114 aa11.04□□□□□ -0.64
PABPC4-216ENST00000492468 FAM223BA6NKX1 122 aa11.04□□□□□ -0.64
PABPC4-216ENST00000492468 KLLNB2CW77 178 aa11.04□□□□□ -0.64
PABPC4-216ENST00000492468 MRPL23Q16540 153 aaKnown RBP11.04□□□□□ -0.64
PABPC4-216ENST00000492468 FAM159AQ6UWV7 190 aa11.04□□□□□ -0.64
PABPC4-216ENST00000492468 FAM223AQ8IWN6 122 aa11.04□□□□□ -0.64
PABPC4-216ENST00000492468 SPTBN2O15020 2390 aa11.03□□□□□ -0.64
PABPC4-216ENST00000492468 LRBAP50851 2863 aa11.03□□□□□ -0.64
PABPC4-216ENST00000492468 F5H697 171 aa11.03□□□□□ -0.64
PABPC4-216ENST00000492468 GRNP28799 593 aaKnown RBP11.03□□□□□ -0.64
PABPC4-216ENST00000492468 C5orf56Q8N8D9 126 aa11.03□□□□□ -0.64
PABPC4-216ENST00000492468 SPANXA1Q9NS26 97 aa11.03□□□□□ -0.64
PABPC4-216ENST00000492468 MDFICQ9P1T7 246 aa11.03□□□□□ -0.64
PABPC4-216ENST00000492468 NDUFA4O00483 81 aa11.02□□□□□ -0.64
PABPC4-216ENST00000492468 UBE2E1P51965 193 aa11.02□□□□□ -0.64
PABPC4-216ENST00000492468 C11orf71Q6IPW1 123 aa11.02□□□□□ -0.64
PABPC4-216ENST00000492468 LITAFQ99732 161 aa11.02□□□□□ -0.64
PABPC4-216ENST00000492468 IGHV3-64A0A075B6Q5 118 aa11.02□□□□□ -0.65
PABPC4-216ENST00000492468 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
PABPC4-216ENST00000492468 BEX4Q9NWD9 120 aaPredicted RBP11.02□□□□□ -0.65
PABPC4-216ENST00000492468 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.65
PABPC4-216ENST00000492468 H3BT86 120 aa11.01□□□□□ -0.65
PABPC4-216ENST00000492468 H7C423 109 aa11.01□□□□□ -0.65
PABPC4-216ENST00000492468 TRBV12-3P01733 135 aa11.01□□□□□ -0.65
PABPC4-216ENST00000492468 SAA4P35542 130 aa11.01□□□□□ -0.65
PABPC4-216ENST00000492468 C2orf82Q6UX34 121 aa11.01□□□□□ -0.65
PABPC4-216ENST00000492468 ZNF580Q9UK33 172 aa11.01□□□□□ -0.65
PABPC4-216ENST00000492468 TRAV41A0A0B4J266 112 aa11.01□□□□□ -0.65
PABPC4-216ENST00000492468 A0A0J9YXV3 536 aa11□□□□□ -0.65
PABPC4-216ENST00000492468 FAM240AA0A1B0GVK7 77 aa11□□□□□ -0.65
PABPC4-216ENST00000492468 M0QY20 66 aa11□□□□□ -0.65
PABPC4-216ENST00000492468 FBXL19-AS1Q494R0 122 aa11□□□□□ -0.65
PABPC4-216ENST00000492468 SMIM20Q8N5G0 67 aa11□□□□□ -0.65
PABPC4-216ENST00000492468 ICOSQ9Y6W8 199 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms