RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	FLI1	Q01543	452 aa	Predicted RBP	12.18	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	C5orf17	Q8NAS9	161 aa		12.18	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	FABP5P3	A8MUU1	101 aa		12.17	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	KRTAP10-8	P60410	259 aa		12.17	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	WDR73	Q6P4I2	378 aa		12.17	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	NUDT15	Q9NV35	164 aa		12.17	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	PLA2G10	O15496	165 aa		12.16	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	LYRM1	O43325	122 aa		12.16	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	OR11H4	Q8NGC9	324 aa		12.16	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334		A0A087WWL8	130 aa		12.15	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.15	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	CCDC160	A6NGH7	325 aa		12.15	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	SFRP2	Q96HF1	295 aa		12.15	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	CHCHD5	Q9BSY4	110 aa		12.15	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	AP5S1	Q9NUS5	200 aa		12.15	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	PLAC8	Q9NZF1	115 aa		12.15	□□□□□ -0.46
CDK5RAP2-218	ENST00000491334	hDV102S1	A0JD36	115 aa		12.14	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334		H3BVH4	76 aa		12.14	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	H2AFB2	P0C5Z0	115 aa		12.14	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	KRTAP26-1	Q6PEX3	210 aa		12.14	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.14	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	SPACA4	Q8TDM5	124 aa		12.14	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	PRR34	Q9NV39	138 aa		12.14	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	KIF25-AS1	Q9Y6Z4	181 aa		12.14	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334		B4DEV8	164 aa		12.13	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	ARMS2	P0C7Q2	107 aa		12.13	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	CHTF8	P0CG12	524 aa		12.13	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	LRRC37A5P	Q49AS3	106 aa		12.13	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	REG3G	Q6UW15	175 aa		12.13	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	RBM38	Q9H0Z9	239 aa	Known RBP	12.13	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	EPDR1	Q9UM22	224 aa		12.13	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	HMGB3	O15347	200 aa	Known RBP	12.12	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	PTTG1	O95997	202 aa		12.12	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	SUMO1	P63165	101 aa	Known RBP	12.12	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	DNLZ	Q5SXM8	178 aa		12.12	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	OR10G8	Q8NGN5	311 aa		12.12	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	GTSF1	Q8WW33	167 aa		12.12	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	PHLDA3	Q9Y5J5	127 aa		12.12	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334		H0YIZ8	118 aa		12.11	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	LINC00269	Q8N2A0	174 aa		12.11	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	KRTAP9-2	Q9BYQ4	174 aa		12.11	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	SIX6	O95475	246 aa		12.1	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	ARL14EPL	P0DKL9	152 aa		12.1	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	PRR3	P79522	188 aa	Known RBP	12.1	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	CYCS	P99999	105 aa	Known RBP	12.1	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	CLPSL2	Q6UWE3	100 aa		12.1	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	TPT1	P13693	172 aa	Known RBP	12.09	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	RAB2A	P61019	212 aa		12.09	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	SPINK6	Q6UWN8	80 aa		12.09	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	HSPB11	Q9Y547	144 aa		12.09	□□□□□ -0.47
CDK5RAP2-218	ENST00000491334	KRBOX1	C9JBD0	128 aa		12.08	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334		M0R381	172 aa		12.08	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	RBX1	P62877	108 aa		12.08	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	TMEM97	Q5BJF2	176 aa		12.08	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	SMIM3	Q9BZL3	60 aa		12.08	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	GRIFIN	A4D1Z8	144 aa		12.07	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	SLPI	P03973	132 aa		12.07	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	RAB4B	P61018	213 aa		12.07	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	ZFP82	Q8N141	532 aa		12.07	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	SUN5	Q8TC36	379 aa		12.07	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	STAG3L2	P0CL84	134 aa		12.06	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	STAG3L3	P0CL85	134 aa		12.06	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	GCHFR	P30047	84 aa		12.06	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	NEXN-AS1	Q8NBZ9	246 aa		12.06	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	ARL2-SNX15	V9GYD0	113 aa		12.06	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	IGLV10-54	A0A075B6I4	117 aa		12.05	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	TRAV8-4	A0A0B4J246	113 aa		12.05	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	TRAV34	A0A0B4J273	112 aa		12.05	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334		M0R036	132 aa		12.05	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334		P01737	135 aa		12.05	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	CDC34	P49427	236 aa	Predicted RBP	12.05	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	FAM240B	A0A1B0GVZ2	78 aa		12.04	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	GZMB	P10144	247 aa		12.04	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	RPL12	P30050	165 aa	Known RBP	12.04	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	REG3A	Q06141	175 aa		12.04	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	GAGE6	Q13070	117 aa		12.04	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	MAJIN	Q3KP22	176 aa		12.04	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	NTM-AS1	Q6ZSK4	140 aa		12.04	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	TMEM167B	Q9NRX6	74 aa		12.04	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	COX6A2	Q02221	97 aa		12.03	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	PRR27	Q6MZM9	219 aa		12.03	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	PPP1R1C	Q8WVI7	109 aa		12.03	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	RAB24	Q969Q5	203 aa		12.03	□□□□□ -0.48
CDK5RAP2-218	ENST00000491334	CRIP1	P50238	77 aa		12.02	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	ZNF56	Q15929	161 aa		12.02	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	LYPD6B	Q8NI32	183 aa		12.02	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	DERL1	Q9BUN8	251 aa		12.02	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	TRBV25-1	A0A075B6N4	114 aa		12.01	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	NDUFS6	O75380	124 aa	Known RBP	12.01	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	PET100	P0DJ07	73 aa		12.01	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	STPG4	Q8N801	248 aa		12.01	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	WFDC1	Q9HC57	220 aa		12.01	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	SH2D1A	O60880	128 aa		12	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	CXorf1	O96002	111 aa		12	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	IFNA7	P01567	189 aa		12	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	SRSF9	Q13242	221 aa	Known RBP eCLIP	12	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	FAM162B	Q5T6X4	162 aa		12	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	VAX2	Q9UIW0	290 aa		12	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	LPA	P08519	4548 aa		11.99	□□□□□ -0.49
CDK5RAP2-218	ENST00000491334	TMSB15B	A0A087X1C1	80 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms