RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 LRP1BQ9NZR2 4599 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 TRAV12-2A0A075B6T6 113 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 A0A096LNJ9 63 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 NBDYA0A0U1RRE5 68 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 C7orf66A4D0T2 115 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 NAP1L6A6NFF2 107 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 CENPXA8MT69 81 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 FNDC10F2Z333 226 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 F5H768 121 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 H3BP45 60 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 H3BQ15 152 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 H7BYZ3 331 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 HSBP1O75506 76 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 NDUFB6O95139 128 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 OR5G3P0C626 314 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 LINC00869P0C866 280 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 SMIM6P0DI80 62 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 S100A7P31151 101 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 BTCP35070 178 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 NKX2-5P52952 324 aaPredicted RBP1.75□□□□□ -2.13
PHC3-213ENST00000491258 TAS2R30P59541 319 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 SEC61GP60059 68 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 RPL19P84098 196 aaKnown RBP1.75□□□□□ -2.13
PHC3-213ENST00000491258 HIST1H1AQ02539 215 aaPredicted RBP1.75□□□□□ -2.13
PHC3-213ENST00000491258 AKR1C1Q04828 323 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 RAB31Q13636 194 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 SOHLH1Q5JUK2 328 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 ZNF493Q6ZR52 646 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 UBE2DNLQ8IWF7 75 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 BAP18Q8IXM2 172 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 TMEM256Q8N2U0 113 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 ZNF738Q8NE65 137 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 OR10P1Q8NGE3 313 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 SMIM12Q96EX1 92 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 GGACTQ9BVM4 153 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 PARD6GQ9BYG4 376 aaPredicted RBP1.75□□□□□ -2.13
PHC3-213ENST00000491258 ARV1Q9H2C2 271 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 NPVFQ9HCQ7 196 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 SPANXA1Q9NS26 97 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 PSENENQ9NZ42 101 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 GSKIPQ9P0R6 139 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 RCL1Q9Y2P8 373 aaKnown RBP1.75□□□□□ -2.13
PHC3-213ENST00000491258 LINC00588Q9Y4M8 146 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 TIMM8BQ9Y5J9 83 aaPredicted RBP1.75□□□□□ -2.13
PHC3-213ENST00000491258 ALG5Q9Y673 324 aa1.75□□□□□ -2.13
PHC3-213ENST00000491258 DNAH6Q9C0G6 4158 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 TRAV26-1A0A087WT03 109 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 TRAV5A0A0B4J249 113 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 A0A1B0GVG6 124 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 SMLR1H3BR10 107 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 TEX46H3BTG2 121 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 SLC17A3O00476 420 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 AGPAT2O15120 278 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 PLA2G10O15496 165 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 SSSCA1O60232 199 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 IFNA5P01569 189 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 ATP5G1P05496 136 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 METTL15P1P0C7V9 234 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 IGLC2P0DOY2 106 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 SCGB1A1P11684 91 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 HTN1P15515 57 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 CXCL2P19875 107 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 PMCHP20382 165 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 ATP5G3P48201 142 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 PPT1P50897 306 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 AKR1D1P51857 326 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 CCL18P55774 89 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 RAB2AP61019 212 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 RRAS2P62070 204 aaPredicted RBP1.74□□□□□ -2.13
PHC3-213ENST00000491258 RHOBP62745 196 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 SLC38A11Q08AI6 406 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 IL15RAQ13261 267 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 OR5I1Q13606 314 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 ESRGQ1W209 222 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 IAH1Q2TAA2 248 aaPredicted RBP1.74□□□□□ -2.13
PHC3-213ENST00000491258 LINC00483Q53H64 154 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 PDZD11Q5EBL8 140 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 LCN15Q6UWW0 184 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 SSX7Q7RTT5 188 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 LINC00305Q7Z4B0 112 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 S100A7AQ86SG5 101 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 BPIFA4PQ86YQ2 179 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 C6orf223Q8N319 242 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 HSD17B11Q8NBQ5 300 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 INO80EQ8NBZ0 244 aaPredicted RBP1.74□□□□□ -2.13
PHC3-213ENST00000491258 OR10J6PQ8NGY7 276 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 RXFP4Q8TDU9 374 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 ZNF431Q8TF32 576 aaPredicted RBP1.74□□□□□ -2.13
PHC3-213ENST00000491258 MGST2Q99735 147 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 C20orf144Q9BQM9 153 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 ARL6Q9H0F7 186 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 OR51M1Q9H341 326 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 C11orf1Q9H5F2 150 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 NOP10Q9NPE3 64 aaKnown RBP1.74□□□□□ -2.13
PHC3-213ENST00000491258 BIN3Q9NQY0 253 aa1.74□□□□□ -2.13
PHC3-213ENST00000491258 TRBV19A0A075B6N1 114 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 A0A0J9YY99 117 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 RNF222A6NCQ9 220 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 FAM24AA6NFZ4 105 aa1.73□□□□□ -2.13
PHC3-213ENST00000491258 C16orf90A8MZG2 172 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms