RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 GATD1Q8NB37 220 aa7.84□□□□□ -1.15
BRD9-209ENST00000490814 NXT2Q9NPJ8 142 aaKnown RBP7.84□□□□□ -1.15
BRD9-209ENST00000490814 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
BRD9-209ENST00000490814 PLA2G2AP14555 144 aa7.84□□□□□ -1.15
BRD9-209ENST00000490814 NDPQ00604 133 aa7.84□□□□□ -1.15
BRD9-209ENST00000490814 EFNA4P52798 201 aa7.83□□□□□ -1.16
BRD9-209ENST00000490814 SRSF2Q01130 221 aaKnown RBP7.83□□□□□ -1.16
BRD9-209ENST00000490814 SRSF9Q13242 221 aaKnown RBP eCLIP7.83□□□□□ -1.16
BRD9-209ENST00000490814 ANKRD17O75179 2603 aaKnown RBP7.83□□□□□ -1.16
BRD9-209ENST00000490814 TRAV2A0A0B4J234 112 aa7.83□□□□□ -1.16
BRD9-209ENST00000490814 TRAV8-4A0A0B4J246 113 aa7.83□□□□□ -1.16
BRD9-209ENST00000490814 TRAV26-2A0A0B4J265 109 aa7.83□□□□□ -1.16
BRD9-209ENST00000490814 HOXB4P17483 251 aaPredicted RBP7.83□□□□□ -1.16
BRD9-209ENST00000490814 SCGB1D4Q6XE38 83 aa7.83□□□□□ -1.16
BRD9-209ENST00000490814 TMEM219Q86XT9 240 aa7.83□□□□□ -1.16
BRD9-209ENST00000490814 BAALCQ8WXS3 180 aa7.83□□□□□ -1.16
BRD9-209ENST00000490814 KLK5Q9Y337 293 aaPredicted RBP7.83□□□□□ -1.16
BRD9-209ENST00000490814 SBSPONQ8IVN8 264 aa7.83□□□□□ -1.16
BRD9-209ENST00000490814 FANCD2OSQ96PS1 177 aa7.83□□□□□ -1.16
BRD9-209ENST00000490814 IGKV3-7A0A075B6H7 116 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 PRAC2D3DTV9 90 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 SPRY2O43597 315 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 TCL1BO95988 128 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 ITLN2Q8WWU7 325 aaPredicted RBP7.82□□□□□ -1.16
BRD9-209ENST00000490814 TRBV6-1A0A0K0K1D8 114 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 DEFB104AQ8WTQ1 72 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 TRBV7-3A0A075B6L6 115 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 PAX8Q06710 450 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 IL17RELQ6ZVW7 336 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 DYNAPQ8N1N2 210 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 DUX3Q96PT4 197 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 ODF3Q96PU9 254 aa7.82□□□□□ -1.16
BRD9-209ENST00000490814 CD7P09564 240 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 HLA-DRB4P13762 266 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 RPS28P62857 69 aaKnown RBP7.81□□□□□ -1.16
BRD9-209ENST00000490814 PDE6HQ13956 83 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 C15orf32Q32M92 178 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 CLEC19AQ6UXS0 136 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 DTX2Q86UW9 622 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 C3orf22Q8N5N4 141 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 CFHR4Q92496 578 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 RNF185Q96GF1 192 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 HLA-DRB4X5D2U9 266 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 SVEP1Q4LDE5 3571 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 SLC25A20O43772 301 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 SPANXN1Q5VSR9 72 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 HRCT1Q6UXD1 115 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 LINC00527Q9UJ94 153 aa7.81□□□□□ -1.16
BRD9-209ENST00000490814 COX6B1P14854 86 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 UBE2D3P61077 147 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 UBE2D2P62837 147 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 RPL11P62913 178 aaKnown RBP7.8□□□□□ -1.16
BRD9-209ENST00000490814 MAPK1IP1LQ8NDC0 245 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 RNF5Q99942 180 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 IGLV11-55A0A075B6I3 123 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 MRPS12O15235 138 aaKnown RBP7.8□□□□□ -1.16
BRD9-209ENST00000490814 OR11H6Q8NGC7 330 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 UBR5O95071 2799 aaPredicted RBP7.8□□□□□ -1.16
BRD9-209ENST00000490814 CTSGP08311 255 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 LAGE3Q14657 143 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 VMO1Q7Z5L0 202 aa7.8□□□□□ -1.16
BRD9-209ENST00000490814 ATRQ13535 2644 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 M0R2P5 195 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 TRGV3P03979 118 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 Q8N8P6 123 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 ZMAT4Q9H898 229 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 IGHV3OR16-10A0A075B7F0 116 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 LY6LH3BQJ8 138 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 J3QLI3 93 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 C4orf26Q17RF5 130 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 TRPT1Q86TN4 253 aaKnown RBP7.79□□□□□ -1.16
BRD9-209ENST00000490814 FAM236AA0A1B0GUQ0 79 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 FAM236BA0A1B0GV22 79 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 RBAKDNA6NC62 111 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 G3V318 75 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 UQCRQO14949 82 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 Q8N1Y9 231 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 ZNRF2Q8NHG8 242 aa7.79□□□□□ -1.16
BRD9-209ENST00000490814 NTN5Q8WTR8 489 aaPredicted RBP7.79□□□□□ -1.16
BRD9-209ENST00000490814 UNC79Q9P2D8 2635 aa7.78□□□□□ -1.16
BRD9-209ENST00000490814 SEC61GP60059 68 aa7.78□□□□□ -1.16
BRD9-209ENST00000490814 SCGB3A1Q96QR1 104 aa7.78□□□□□ -1.16
BRD9-209ENST00000490814 SMAD5-AS1Q9Y6J3 95 aa7.78□□□□□ -1.16
BRD9-209ENST00000490814 M0R381 172 aa7.78□□□□□ -1.16
BRD9-209ENST00000490814 ZNF815PA8K554 130 aa7.77□□□□□ -1.16
BRD9-209ENST00000490814 F8W735 103 aaPredicted RBP7.77□□□□□ -1.16
BRD9-209ENST00000490814 S100A4P26447 101 aaKnown RBP7.77□□□□□ -1.16
BRD9-209ENST00000490814 ZNF56Q15929 161 aa7.77□□□□□ -1.16
BRD9-209ENST00000490814 GAGE2AQ6NT46 116 aa7.77□□□□□ -1.16
BRD9-209ENST00000490814 SPANXCQ9NY87 97 aa7.77□□□□□ -1.16
BRD9-209ENST00000490814 C1orf43Q9BWL3 253 aa7.77□□□□□ -1.17
BRD9-209ENST00000490814 CSMD2Q7Z408 3487 aa7.77□□□□□ -1.17
BRD9-209ENST00000490814 C2CD3Q4AC94 2353 aa7.76□□□□□ -1.17
BRD9-209ENST00000490814 H7C1H1 209 aa7.76□□□□□ -1.17
BRD9-209ENST00000490814 MGPP08493 103 aa7.76□□□□□ -1.17
BRD9-209ENST00000490814 PLNP26678 52 aa7.76□□□□□ -1.17
BRD9-209ENST00000490814 PMVKQ15126 192 aa7.76□□□□□ -1.17
BRD9-209ENST00000490814 LINC00526Q96FQ7 95 aa7.76□□□□□ -1.17
BRD9-209ENST00000490814 C16orf92Q96LL3 132 aa7.76□□□□□ -1.17
BRD9-209ENST00000490814 AGPAT4-IT1Q9H0P7 198 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 1203.2 ms