RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PKIAP61925 76 aa8.31□□□□□ -1.08
EXOSC3-207ENST00000490516 GAGE6Q13070 117 aa8.31□□□□□ -1.08
EXOSC3-207ENST00000490516 NDFIP1Q9BT67 221 aa8.31□□□□□ -1.08
EXOSC3-207ENST00000490516 OR5AC2Q9NZP5 309 aa8.31□□□□□ -1.08
EXOSC3-207ENST00000490516 FLVCR2Q9UPI3 526 aa8.31□□□□□ -1.08
EXOSC3-207ENST00000490516 IGKV3D-20A0A0C4DH25 116 aa8.3□□□□□ -1.08
EXOSC3-207ENST00000490516 AP3S2P59780 193 aa8.3□□□□□ -1.08
EXOSC3-207ENST00000490516 NTM-AS1Q6ZSK4 140 aa8.3□□□□□ -1.08
EXOSC3-207ENST00000490516 TMEM252Q8N6L7 170 aa8.3□□□□□ -1.08
EXOSC3-207ENST00000490516 C15orf56Q8N910 161 aa8.3□□□□□ -1.08
EXOSC3-207ENST00000490516 GFRA4Q9GZZ7 299 aa8.3□□□□□ -1.08
EXOSC3-207ENST00000490516 LYRM2Q9NU23 88 aaPredicted RBP8.3□□□□□ -1.08
EXOSC3-207ENST00000490516 H3BVH4 76 aa8.29□□□□□ -1.08
EXOSC3-207ENST00000490516 HBG1P69891 147 aa8.29□□□□□ -1.08
EXOSC3-207ENST00000490516 HBG2P69892 147 aa8.29□□□□□ -1.08
EXOSC3-207ENST00000490516 SPCS2Q15005 226 aa8.29□□□□□ -1.08
EXOSC3-207ENST00000490516 FAM74A1Q5RGS3 127 aa8.29□□□□□ -1.08
EXOSC3-207ENST00000490516 INO80EQ8NBZ0 244 aaPredicted RBP8.29□□□□□ -1.08
EXOSC3-207ENST00000490516 OR10G8Q8NGN5 311 aa8.29□□□□□ -1.08
EXOSC3-207ENST00000490516 MBD2Q9UBB5 411 aa8.29□□□□□ -1.08
EXOSC3-207ENST00000490516 ATP6V1FQ16864 119 aa8.28□□□□□ -1.08
EXOSC3-207ENST00000490516 HIGD2BQ4VC39 106 aa8.28□□□□□ -1.08
EXOSC3-207ENST00000490516 STX12Q86Y82 276 aa8.28□□□□□ -1.08
EXOSC3-207ENST00000490516 NEXN-AS1Q8NBZ9 246 aa8.28□□□□□ -1.08
EXOSC3-207ENST00000490516 SFRP2Q96HF1 295 aa8.28□□□□□ -1.08
EXOSC3-207ENST00000490516 IL36BQ9NZH7 164 aa8.28□□□□□ -1.08
EXOSC3-207ENST00000490516 SMUG1Q53HV7 270 aa8.27□□□□□ -1.09
EXOSC3-207ENST00000490516 KHDC3LQ587J8 217 aa8.27□□□□□ -1.09
EXOSC3-207ENST00000490516 TRAV8-4A0A0B4J246 113 aa8.26□□□□□ -1.09
EXOSC3-207ENST00000490516 ATP6V1G2O95670 118 aa8.26□□□□□ -1.09
EXOSC3-207ENST00000490516 P01737 135 aa8.26□□□□□ -1.09
EXOSC3-207ENST00000490516 PYDC2Q56P42 97 aa8.26□□□□□ -1.09
EXOSC3-207ENST00000490516 ARL6IP6Q8N6S5 226 aa8.26□□□□□ -1.09
EXOSC3-207ENST00000490516 OR11H4Q8NGC9 324 aa8.26□□□□□ -1.09
EXOSC3-207ENST00000490516 PSG8Q9UQ74 426 aa8.26□□□□□ -1.09
EXOSC3-207ENST00000490516 FAM25EA8MYX2 175 aa8.25□□□□□ -1.09
EXOSC3-207ENST00000490516 ARMS2P0C7Q2 107 aa8.25□□□□□ -1.09
EXOSC3-207ENST00000490516 GZMBP10144 247 aa8.25□□□□□ -1.09
EXOSC3-207ENST00000490516 PVALBP20472 110 aaPredicted RBP8.25□□□□□ -1.09
EXOSC3-207ENST00000490516 ZFP69Q49AA0 526 aa8.25□□□□□ -1.09
EXOSC3-207ENST00000490516 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
EXOSC3-207ENST00000490516 MITD1Q8WV92 249 aa8.25□□□□□ -1.09
EXOSC3-207ENST00000490516 LINC00474Q9P2X8 69 aa8.25□□□□□ -1.09
EXOSC3-207ENST00000490516 NDUFB6O95139 128 aa8.24□□□□□ -1.09
EXOSC3-207ENST00000490516 NHLH2Q02577 135 aa8.24□□□□□ -1.09
EXOSC3-207ENST00000490516 PRNTQ86SH4 94 aa8.24□□□□□ -1.09
EXOSC3-207ENST00000490516 M0R381 172 aa8.23□□□□□ -1.09
EXOSC3-207ENST00000490516 TAS2R45P59539 299 aa8.23□□□□□ -1.09
EXOSC3-207ENST00000490516 DERL1Q9BUN8 251 aa8.23□□□□□ -1.09
EXOSC3-207ENST00000490516 IGLV4-60A0A075B6I1 120 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 IGLV1-50A0A075B6I6 118 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 GRIFINA4D1Z8 144 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 B4DEV8 164 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 MT-ND6P03923 174 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 TCRAP04437 139 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 FLI1Q01543 452 aaPredicted RBP8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 C1orf137Q5JT78 98 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 CFAP161Q6P656 301 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 FER1L6-AS1Q8NA97 138 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 OR5C1Q8NGR4 320 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 SUN5Q8TC36 379 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 DEDD2Q8WXF8 326 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 WDR61Q9GZS3 305 aaKnown RBP8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 KCNIP2Q9NS61 270 aa8.22□□□□□ -1.09
EXOSC3-207ENST00000490516 TRBV25-1A0A075B6N4 114 aa8.21□□□□□ -1.1
EXOSC3-207ENST00000490516 GAGE12HA6NDE8 117 aa8.21□□□□□ -1.1
EXOSC3-207ENST00000490516 PRR27Q6MZM9 219 aa8.21□□□□□ -1.1
EXOSC3-207ENST00000490516 DIRC1Q969H9 104 aa8.21□□□□□ -1.1
EXOSC3-207ENST00000490516 PHLDA3Q9Y5J5 127 aa8.21□□□□□ -1.1
EXOSC3-207ENST00000490516 TRBV6-1A0A0K0K1D8 114 aa8.2□□□□□ -1.1
EXOSC3-207ENST00000490516 SERTM2A0A1B0GWG4 89 aa8.2□□□□□ -1.1
EXOSC3-207ENST00000490516 TSPAN13O95857 204 aa8.2□□□□□ -1.1
EXOSC3-207ENST00000490516 RAB4BP61018 213 aa8.2□□□□□ -1.1
EXOSC3-207ENST00000490516 RAB2AP61019 212 aa8.2□□□□□ -1.1
EXOSC3-207ENST00000490516 RAB32Q13637 225 aa8.2□□□□□ -1.1
EXOSC3-207ENST00000490516 ZNF56Q15929 161 aa8.2□□□□□ -1.1
EXOSC3-207ENST00000490516 TMEM97Q5BJF2 176 aa8.2□□□□□ -1.1
EXOSC3-207ENST00000490516 DNLZQ5SXM8 178 aa8.2□□□□□ -1.1
EXOSC3-207ENST00000490516 FABP5P3A8MUU1 101 aa8.19□□□□□ -1.1
EXOSC3-207ENST00000490516 C17orf112F2Z3M2 114 aa8.19□□□□□ -1.1
EXOSC3-207ENST00000490516 M0R036 132 aa8.19□□□□□ -1.1
EXOSC3-207ENST00000490516 KRTAP1-4P0C5Y4 121 aa8.19□□□□□ -1.1
EXOSC3-207ENST00000490516 MRPS26Q9BYN8 205 aaKnown RBP8.19□□□□□ -1.1
EXOSC3-207ENST00000490516 V9GYH0 126 aa8.19□□□□□ -1.1
EXOSC3-207ENST00000490516 MUC17Q685J3 4493 aa8.19□□□□□ -1.1
EXOSC3-207ENST00000490516 GVQW2A0A096LPI5 108 aaPredicted RBP8.18□□□□□ -1.1
EXOSC3-207ENST00000490516 KRBOX1C9JBD0 128 aa8.18□□□□□ -1.1
EXOSC3-207ENST00000490516 H0Y9J4 135 aa8.18□□□□□ -1.1
EXOSC3-207ENST00000490516 K7EQM0 130 aa8.18□□□□□ -1.1
EXOSC3-207ENST00000490516 TPT1P13693 172 aaKnown RBP8.18□□□□□ -1.1
EXOSC3-207ENST00000490516 SRSF3P84103 164 aaKnown RBP8.18□□□□□ -1.1
EXOSC3-207ENST00000490516 IQCJQ1A5X6 159 aa8.18□□□□□ -1.1
EXOSC3-207ENST00000490516 C5orf17Q8NAS9 161 aa8.18□□□□□ -1.1
EXOSC3-207ENST00000490516 IGHV1-24A0A0C4DH33 117 aa8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 IGLV7-43P04211 117 aa8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 SULT1A2P50226 295 aa8.17□□□□□ -1.1
EXOSC3-207ENST00000490516 UBE2D1P51668 147 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms