RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 LGALS9CQ6DKI2 356 aa11□□□□□ -0.65
C9orf3-219ENST00000488186 TMEM218A2RU14 115 aa10.99□□□□□ -0.65
C9orf3-219ENST00000488186 F8W036 122 aa10.99□□□□□ -0.65
C9orf3-219ENST00000488186 MRPL23Q16540 153 aaKnown RBP10.99□□□□□ -0.65
C9orf3-219ENST00000488186 TSKUQ8WUA8 353 aa10.99□□□□□ -0.65
C9orf3-219ENST00000488186 LINC00476Q8WZB0 136 aa10.99□□□□□ -0.65
C9orf3-219ENST00000488186 VSIG2Q96IQ7 327 aa10.99□□□□□ -0.65
C9orf3-219ENST00000488186 PGLYRP4Q96LB8 373 aa10.99□□□□□ -0.65
C9orf3-219ENST00000488186 AP1S3Q96PC3 154 aa10.99□□□□□ -0.65
C9orf3-219ENST00000488186 SAMD10Q9BYL1 202 aa10.99□□□□□ -0.65
C9orf3-219ENST00000488186 ALMS1Q8TCU4 4167 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 F5H697 171 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 NXPH4O95158 308 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 GYPEP15421 78 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 NTF3P20783 257 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 CCL18P55774 89 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 PNRC1Q12796 327 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-219ENST00000488186 RHOHQ15669 191 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 TWIST1Q15672 202 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 WDR73Q6P4I2 378 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 SMIM15Q7Z3B0 74 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 SLC25A29Q8N8R3 303 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 GFRA4Q9GZZ7 299 aa10.98□□□□□ -0.65
C9orf3-219ENST00000488186 TRBV6-4A0A1B0GX49 114 aa10.97□□□□□ -0.65
C9orf3-219ENST00000488186 CRYGDP07320 174 aa10.97□□□□□ -0.65
C9orf3-219ENST00000488186 TRGC1P0CF51 173 aa10.97□□□□□ -0.65
C9orf3-219ENST00000488186 SRIP30626 198 aa10.97□□□□□ -0.65
C9orf3-219ENST00000488186 CTRLP40313 264 aa10.97□□□□□ -0.65
C9orf3-219ENST00000488186 ZNF56Q15929 161 aa10.97□□□□□ -0.65
C9orf3-219ENST00000488186 C14orf178Q8N769 122 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-219ENST00000488186 GTSF1Q8WW33 167 aa10.97□□□□□ -0.65
C9orf3-219ENST00000488186 V9GYV3 84 aa10.97□□□□□ -0.65
C9orf3-219ENST00000488186 NACAE9PAV3 2078 aa10.97□□□□□ -0.65
C9orf3-219ENST00000488186 A0A096LPF7 62 aa10.96□□□□□ -0.65
C9orf3-219ENST00000488186 FAM231BA6NCW3 169 aa10.96□□□□□ -0.65
C9orf3-219ENST00000488186 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
C9orf3-219ENST00000488186 PPP1R2P9O14990 202 aa10.96□□□□□ -0.65
C9orf3-219ENST00000488186 MSRB1Q9NZV6 116 aa10.96□□□□□ -0.65
C9orf3-219ENST00000488186 RYR3Q15413 4870 aa10.96□□□□□ -0.66
C9orf3-219ENST00000488186 K7EQD1 137 aa10.95□□□□□ -0.66
C9orf3-219ENST00000488186 MT-ND4LP03901 98 aa10.95□□□□□ -0.66
C9orf3-219ENST00000488186 FOXA3P55318 350 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-219ENST00000488186 UFSP1Q6NVU6 142 aa10.95□□□□□ -0.66
C9orf3-219ENST00000488186 SH2D6Q7Z4S9 175 aa10.95□□□□□ -0.66
C9orf3-219ENST00000488186 MGPP08493 103 aa10.94□□□□□ -0.66
C9orf3-219ENST00000488186 RAB4BP61018 213 aa10.94□□□□□ -0.66
C9orf3-219ENST00000488186 RNF212Q495C1 297 aa10.94□□□□□ -0.66
C9orf3-219ENST00000488186 NEGR1Q7Z3B1 354 aa10.94□□□□□ -0.66
C9orf3-219ENST00000488186 SEC11CQ9BY50 192 aa10.94□□□□□ -0.66
C9orf3-219ENST00000488186 NAT8BQ9UHF3 227 aa10.94□□□□□ -0.66
C9orf3-219ENST00000488186 LOC100131303A0A0U1RQF7 123 aa10.93□□□□□ -0.66
C9orf3-219ENST00000488186 A0A1B0GUT8 65 aa10.93□□□□□ -0.66
C9orf3-219ENST00000488186 Q6ZSN1 163 aa10.93□□□□□ -0.66
C9orf3-219ENST00000488186 DPH3P1Q9H4G8 78 aa10.93□□□□□ -0.66
C9orf3-219ENST00000488186 RYR2Q92736 4967 aa10.93□□□□□ -0.66
C9orf3-219ENST00000488186 VPS13DQ5THJ4 4388 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 GAGE12JA6NER3 117 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 EVI2AP22794 236 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 GAGE1Q13065 139 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 GAGE4Q13068 117 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 GAGE5Q13069 117 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 RIGQ13278 110 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 GAGE13Q4V321 117 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 NUP35Q8NFH5 326 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 ANAPC16Q96DE5 110 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 CNFNQ9BYD5 112 aa10.92□□□□□ -0.66
C9orf3-219ENST00000488186 ESRGQ1W209 222 aa10.91□□□□□ -0.66
C9orf3-219ENST00000488186 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
C9orf3-219ENST00000488186 SMIM27A0A1W2PRY6 76 aa10.9□□□□□ -0.66
C9orf3-219ENST00000488186 H7C1H1 209 aa10.9□□□□□ -0.66
C9orf3-219ENST00000488186 ADCYAP1P18509 176 aa10.9□□□□□ -0.66
C9orf3-219ENST00000488186 FAM3BP58499 235 aaPredicted RBP10.9□□□□□ -0.66
C9orf3-219ENST00000488186 RPL36AP83881 106 aaKnown RBP10.9□□□□□ -0.66
C9orf3-219ENST00000488186 RPL36ALQ969Q0 106 aaKnown RBP10.9□□□□□ -0.66
C9orf3-219ENST00000488186 LINC00588Q9Y4M8 146 aa10.9□□□□□ -0.66
C9orf3-219ENST00000488186 KIF25-AS1Q9Y6Z4 181 aa10.9□□□□□ -0.66
C9orf3-219ENST00000488186 NDUFA5Q16718 116 aa10.89□□□□□ -0.67
C9orf3-219ENST00000488186 LYPD5Q6UWN5 251 aa10.89□□□□□ -0.67
C9orf3-219ENST00000488186 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-219ENST00000488186 ATP6V0E2Q8NHE4 81 aa10.89□□□□□ -0.67
C9orf3-219ENST00000488186 ZNRF2Q8NHG8 242 aa10.89□□□□□ -0.67
C9orf3-219ENST00000488186 KMT2AQ03164 3969 aa10.89□□□□□ -0.67
C9orf3-219ENST00000488186 MRPS16Q9Y3D3 137 aaKnown RBP10.87□□□□□ -0.67
C9orf3-219ENST00000488186 TNFRSF18Q9Y5U5 241 aa10.87□□□□□ -0.67
C9orf3-219ENST00000488186 HYDINQ4G0P3 5121 aa10.87□□□□□ -0.67
C9orf3-219ENST00000488186 TRBV7-3A0A075B6L6 115 aa10.86□□□□□ -0.67
C9orf3-219ENST00000488186 A0A1B0GW15 77 aa10.86□□□□□ -0.67
C9orf3-219ENST00000488186 S100A8P05109 93 aa10.86□□□□□ -0.67
C9orf3-219ENST00000488186 CAMPP49913 170 aa10.86□□□□□ -0.67
C9orf3-219ENST00000488186 LINC00315P59091 139 aa10.86□□□□□ -0.67
C9orf3-219ENST00000488186 SUMO4Q6EEV6 95 aa10.86□□□□□ -0.67
C9orf3-219ENST00000488186 CTDSP1Q9GZU7 261 aa10.86□□□□□ -0.67
C9orf3-219ENST00000488186 GTSF1LQ9H1H1 148 aa10.86□□□□□ -0.67
C9orf3-219ENST00000488186 DNAH6Q9C0G6 4158 aa10.86□□□□□ -0.67
C9orf3-219ENST00000488186 IGLV2-18A0A075B6J9 118 aa10.85□□□□□ -0.67
C9orf3-219ENST00000488186 MRPL54Q6P161 138 aaKnown RBP10.85□□□□□ -0.67
C9orf3-219ENST00000488186 RASL11AQ6T310 242 aa10.85□□□□□ -0.67
C9orf3-219ENST00000488186 NEXN-AS1Q8NBZ9 246 aa10.85□□□□□ -0.67
C9orf3-219ENST00000488186 TMEM191AQ9H0A3 160 aa10.85□□□□□ -0.67
C9orf3-219ENST00000488186 Q9H8V8 135 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms