RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 DMAC1Q96GE9 116 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 ODF3Q96PU9 254 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 DSCR8Q96T75 97 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 TTTY12Q9BZ98 90 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 DPY30Q9C005 99 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 DPH3P1Q9H4G8 78 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 FAIMQ9NVQ4 179 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 MRPL35Q9NZE8 188 aaKnown RBP0.82□□□□□ -2.28
USP9X-208ENST00000487625 NDUFA12Q9UI09 145 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 V9GYS6 101 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 ZFC3H1O60293 1989 aaKnown RBP0.82□□□□□ -2.28
USP9X-208ENST00000487625 EPRSP07814 1512 aaKnown RBP0.82□□□□□ -2.28
USP9X-208ENST00000487625 MAP3K1Q13233 1512 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 VWDEQ8N2E2 1590 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 BAZ1AQ9NRL2 1556 aaPredicted RBP0.82□□□□□ -2.28
USP9X-208ENST00000487625 BRWD1Q9NSI6 2320 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 FREM3P0C091 2139 aa0.82□□□□□ -2.28
USP9X-208ENST00000487625 CACNA1DQ01668 2161 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 MYOM1P52179 1685 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 SHANK2Q9UPX8 1470 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 PATJQ8NI35 1801 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 IGKV3-7A0A075B6H7 116 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 LOC110117498A0A087WWA1 95 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 NUPR2A6NF83 97 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 MRPS14O60783 128 aaKnown RBP0.81□□□□□ -2.28
USP9X-208ENST00000487625 CCL8P80075 99 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 C9orf116Q5BN46 136 aaPredicted RBP0.81□□□□□ -2.28
USP9X-208ENST00000487625 KIAA2026Q5HYC2 2103 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 MYOZ3Q8TDC0 251 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 TXNDC17Q9BRA2 123 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 CYSTM1Q9H1C7 97 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 TMEM106BQ9NUM4 274 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 SCP2D1Q9UJQ7 156 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 SHANK1Q9Y566 2161 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 CR1P17927 2039 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 SCN3AQ9NY46 2000 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 BLMP54132 1417 aaPredicted RBP0.81□□□□□ -2.28
USP9X-208ENST00000487625 SCAPERQ9BY12 1400 aa0.81□□□□□ -2.28
USP9X-208ENST00000487625 PPLO60437 1756 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 DLEC1Q9Y238 1755 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 IQSEC2Q5JU85 1478 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 PHRF1Q9P1Y6 1649 aaKnown RBP0.8□□□□□ -2.28
USP9X-208ENST00000487625 PIGBOS1A0A0B4J2F0 54 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 TRBV7-7A0A0K0K1E9 115 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 TRBV10-3A0A0K0K1G6 114 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 FAM24AA6NFZ4 105 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 IGLV3-1P01715 115 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 CCKP06307 115 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 LINC00032P0C843 101 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 IGLC1P0CG04 106 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 SLC25A6P12236 298 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 POLR2JP52435 117 aaKnown RBP0.8□□□□□ -2.28
USP9X-208ENST00000487625 S100A10P60903 97 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 INSL4Q14641 139 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 PYY3Q5JQD4 70 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 LYPD5Q6UWN5 251 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 ZNF818PQ6ZRF7 136 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 C4orf33Q8N1A6 199 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 C15orf53Q8NAA6 179 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 C10orf105Q8TEF2 133 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 AMELYQ99218 206 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 CYP4F30PQ9H0H9 118 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 CDC42SE1Q9NRR8 79 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 MED9Q9NWA0 146 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 COL4A6Q14031 1691 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 SIPA1L3O60292 1781 aaPredicted RBP0.8□□□□□ -2.28
USP9X-208ENST00000487625 TNRC6BQ9UPQ9 1833 aaKnown RBP0.8□□□□□ -2.28
USP9X-208ENST00000487625 RRBP1Q9P2E9 1410 aaKnown RBP0.8□□□□□ -2.28
USP9X-208ENST00000487625 TRPM7Q96QT4 1865 aa0.8□□□□□ -2.28
USP9X-208ENST00000487625 PTPRFP10586 1907 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 MDC1Q14676 2089 aaKnown RBP0.79□□□□□ -2.28
USP9X-208ENST00000487625 MYO3AQ8NEV4 1616 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 MAP3K4Q9Y6R4 1608 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 IGLV3-32A0A0A0MS00 114 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 TRBV6-8A0A0A6YYG3 113 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 TRBV7-1A0A0A6YYK4 115 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 LOC107984156A0A0G2JMH3 177 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 TMEM30CPA0ZSE6 113 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 RBAKDNA6NC62 111 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 SDHAF1A6NFY7 115 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 F8W1H4 67 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 SIX6O95475 246 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 UBE2D1P51668 147 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 MPV17LQ2QL34 196 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 C6orf52Q5T4I8 152 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 CSAG1Q6PB30 78 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 ARL17AQ8IVW1 177 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 CLECL1Q8IZS7 167 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 AP4S1Q9Y587 144 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 PLXNA1Q9UIW2 1896 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 ANKRD36BQ8N2N9 1353 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 PLEKHH2Q8IVE3 1493 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 NRXN1Q9ULB1 1477 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 HEATR5BQ9P2D3 2071 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 UNC13BO14795 1591 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 ARHGEF5Q12774 1597 aa0.79□□□□□ -2.28
USP9X-208ENST00000487625 MON2Q7Z3U7 1717 aa0.78□□□□□ -2.28
USP9X-208ENST00000487625 ARAP2Q8WZ64 1704 aa0.78□□□□□ -2.28
USP9X-208ENST00000487625 NRXN2Q9P2S2 1712 aa0.78□□□□□ -2.28
USP9X-208ENST00000487625 PTPRDP23468 1912 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms