RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NCS1P62166 190 aa4.92□□□□□ -1.62
XRN1-212ENST00000486211 RBX1P62877 108 aa4.92□□□□□ -1.62
XRN1-212ENST00000486211 MRPS10P82664 201 aaKnown RBP4.92□□□□□ -1.62
XRN1-212ENST00000486211 C15orf56Q8N910 161 aa4.92□□□□□ -1.62
XRN1-212ENST00000486211 TNFRSF6BO95407 300 aa4.91□□□□□ -1.62
XRN1-212ENST00000486211 SFT2D2O95562 160 aa4.91□□□□□ -1.62
XRN1-212ENST00000486211 ZNF80P51504 273 aaPredicted RBP4.91□□□□□ -1.62
XRN1-212ENST00000486211 RANP62826 216 aaKnown RBP4.91□□□□□ -1.62
XRN1-212ENST00000486211 PPP1R1AQ13522 171 aa4.91□□□□□ -1.62
XRN1-212ENST00000486211 LGALSLQ3ZCW2 172 aaPredicted RBP4.91□□□□□ -1.62
XRN1-212ENST00000486211 MIR17HGQ75NE6 70 aa4.91□□□□□ -1.62
XRN1-212ENST00000486211 DIRAS2Q96HU8 199 aa4.91□□□□□ -1.62
XRN1-212ENST00000486211 MIXL1Q9H2W2 232 aa4.91□□□□□ -1.62
XRN1-212ENST00000486211 TREM1Q9NP99 234 aa4.91□□□□□ -1.62
XRN1-212ENST00000486211 TRBV7-3A0A075B6L6 115 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 TRBV10-1A0A0K0K1A3 114 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 RHODO00212 210 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 PTTG1O95997 202 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 MBPP02686 304 aaPredicted RBP4.9□□□□□ -1.63
XRN1-212ENST00000486211 PKIAP61925 76 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 REG3AQ06141 175 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 FER1L6-AS1Q8NA97 138 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 DIRC1Q969H9 104 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 BCL7BQ9BQE9 202 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 CHCHD5Q9BSY4 110 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 MCUBQ9NWR8 336 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 LINC00474Q9P2X8 69 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 RAB26Q9ULW5 256 aa4.9□□□□□ -1.63
XRN1-212ENST00000486211 C7orf66A4D0T2 115 aa4.89□□□□□ -1.63
XRN1-212ENST00000486211 H0Y9J4 135 aa4.89□□□□□ -1.63
XRN1-212ENST00000486211 VBP1P61758 197 aa4.89□□□□□ -1.63
XRN1-212ENST00000486211 RPL36AP83881 106 aaKnown RBP4.89□□□□□ -1.63
XRN1-212ENST00000486211 NTM-AS1Q6ZSK4 140 aa4.89□□□□□ -1.63
XRN1-212ENST00000486211 OR10G8Q8NGN5 311 aa4.89□□□□□ -1.63
XRN1-212ENST00000486211 SUN5Q8TC36 379 aa4.89□□□□□ -1.63
XRN1-212ENST00000486211 RPL36ALQ969Q0 106 aaKnown RBP4.89□□□□□ -1.63
XRN1-212ENST00000486211 SLIRPQ9GZT3 109 aaKnown RBP4.89□□□□□ -1.63
XRN1-212ENST00000486211 UQCC1Q9NVA1 299 aa4.89□□□□□ -1.63
XRN1-212ENST00000486211 TRAV8-4A0A0B4J246 113 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 UBE2L5PA0A1B0GUS4 154 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 TSPAN13O95857 204 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 P01737 135 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 GZMBP10144 247 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 S100A10P60903 97 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 RAB32Q13637 225 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 HIGD2BQ4VC39 106 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 FAM74A4Q5TZK3 123 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 GOLT1AQ6ZVE7 132 aa4.88□□□□□ -1.63
XRN1-212ENST00000486211 RABL2AQ9UBK7 228 aaPredicted RBP4.88□□□□□ -1.63
XRN1-212ENST00000486211 TRAV1-1A0A0B4J248 108 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 CST7O76096 145 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 MT-ND6P03923 174 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 IGLV7-43P04211 117 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 RAB5CP51148 216 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 BAXQ07812 192 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 GAGE6Q13070 117 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 C1orf137Q5JT78 98 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 C20orf203Q8NBC4 194 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 AP3S1Q92572 193 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 HYLS1Q96M11 299 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 KRTAP4-1Q9BYQ7 146 aa4.87□□□□□ -1.63
XRN1-212ENST00000486211 GVQW2A0A096LPI5 108 aaPredicted RBP4.86□□□□□ -1.63
XRN1-212ENST00000486211 IGKV3D-20A0A0C4DH25 116 aa4.86□□□□□ -1.63
XRN1-212ENST00000486211 A0A1W2PNN7 141 aa4.86□□□□□ -1.63
XRN1-212ENST00000486211 RPL13AP40429 203 aaKnown RBP4.86□□□□□ -1.63
XRN1-212ENST00000486211 NEXN-AS1Q8NBZ9 246 aa4.86□□□□□ -1.63
XRN1-212ENST00000486211 NMES1Q9C002 83 aa4.86□□□□□ -1.63
XRN1-212ENST00000486211 C11orf1Q9H5F2 150 aa4.86□□□□□ -1.63
XRN1-212ENST00000486211 OTORQ9NRC9 128 aa4.86□□□□□ -1.63
XRN1-212ENST00000486211 OR7C2O60412 319 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 GCGP01275 180 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 FGF7P21781 194 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 UBE2D1P51668 147 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 UBE2L3P68036 154 aaKnown RBP4.85□□□□□ -1.63
XRN1-212ENST00000486211 IAH1Q2TAA2 248 aaPredicted RBP4.85□□□□□ -1.63
XRN1-212ENST00000486211 SPANXN2Q5MJ10 180 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 MITD1Q8WV92 249 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 SFRP2Q96HF1 295 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 SGK494Q96LW2 274 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 NPCDR1Q9BY65 106 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 VCX3BQ9H321 246 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 IL36BQ9NZH7 164 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 OR5AC2Q9NZP5 309 aa4.85□□□□□ -1.63
XRN1-212ENST00000486211 IGLV4-60A0A075B6I1 120 aa4.84□□□□□ -1.63
XRN1-212ENST00000486211 C9orf170A2RU37 121 aa4.84□□□□□ -1.63
XRN1-212ENST00000486211 CTDSP2O14595 271 aa4.84□□□□□ -1.63
XRN1-212ENST00000486211 S100A4P26447 101 aaKnown RBP4.84□□□□□ -1.63
XRN1-212ENST00000486211 AMTP48728 403 aa4.84□□□□□ -1.63
XRN1-212ENST00000486211 GNG5P63218 68 aa4.84□□□□□ -1.63
XRN1-212ENST00000486211 PRR27Q6MZM9 219 aa4.84□□□□□ -1.63
XRN1-212ENST00000486211 ARL6IP6Q8N6S5 226 aa4.84□□□□□ -1.63
XRN1-212ENST00000486211 FUNDC2Q9BWH2 189 aa4.84□□□□□ -1.63
XRN1-212ENST00000486211 LYRM2Q9NU23 88 aaPredicted RBP4.84□□□□□ -1.63
XRN1-212ENST00000486211 H3BVH4 76 aa4.83□□□□□ -1.64
XRN1-212ENST00000486211 CRYGAP11844 174 aa4.83□□□□□ -1.64
XRN1-212ENST00000486211 RAB2AP61019 212 aa4.83□□□□□ -1.64
XRN1-212ENST00000486211 CYCSP99999 105 aaKnown RBP4.83□□□□□ -1.64
XRN1-212ENST00000486211 IL18Q14116 193 aa4.83□□□□□ -1.64
XRN1-212ENST00000486211 IQCJQ1A5X6 159 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms