RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 Q6ZTC4 211 aa11.15□□□□□ -0.62
APOE-205ENST00000485628 BTF3L4Q96K17 158 aa11.15□□□□□ -0.62
APOE-205ENST00000485628 TRBV24-1A0A075B6N3 115 aa11.14□□□□□ -0.63
APOE-205ENST00000485628 TRGV2A0A075B6R0 118 aa11.14□□□□□ -0.63
APOE-205ENST00000485628 HOXA5P20719 270 aa11.14□□□□□ -0.63
APOE-205ENST00000485628 RIGQ13278 110 aa11.14□□□□□ -0.63
APOE-205ENST00000485628 TWIST1Q15672 202 aa11.14□□□□□ -0.63
APOE-205ENST00000485628 RASL11AQ6T310 242 aa11.14□□□□□ -0.63
APOE-205ENST00000485628 TMEM191AQ9H0A3 160 aa11.14□□□□□ -0.63
APOE-205ENST00000485628 ATP5G1P05496 136 aa11.13□□□□□ -0.63
APOE-205ENST00000485628 TRGC1P0CF51 173 aa11.13□□□□□ -0.63
APOE-205ENST00000485628 KCNIP4Q6PIL6 250 aa11.13□□□□□ -0.63
APOE-205ENST00000485628 Q6ZSN1 163 aa11.13□□□□□ -0.63
APOE-205ENST00000485628 OR4C5Q8NGB2 326 aa11.13□□□□□ -0.63
APOE-205ENST00000485628 AP1S3Q96PC3 154 aa11.13□□□□□ -0.63
APOE-205ENST00000485628 RHODO00212 210 aa11.12□□□□□ -0.63
APOE-205ENST00000485628 GATA1P15976 413 aaPredicted RBP11.12□□□□□ -0.63
APOE-205ENST00000485628 SSTP61278 116 aa11.12□□□□□ -0.63
APOE-205ENST00000485628 HBBP68871 147 aa11.12□□□□□ -0.63
APOE-205ENST00000485628 CBLN2Q8IUK8 224 aa11.12□□□□□ -0.63
APOE-205ENST00000485628 C14orf178Q8N769 122 aaPredicted RBP11.12□□□□□ -0.63
APOE-205ENST00000485628 BORCS7Q96B45 105 aa11.12□□□□□ -0.63
APOE-205ENST00000485628 RNF185Q96GF1 192 aa11.12□□□□□ -0.63
APOE-205ENST00000485628 SMCO4Q9NRQ5 59 aa11.12□□□□□ -0.63
APOE-205ENST00000485628 URGCP-MRPS24S4R325 110 aa11.12□□□□□ -0.63
APOE-205ENST00000485628 A0A087WWL8 130 aa11.11□□□□□ -0.63
APOE-205ENST00000485628 S100PP25815 95 aa11.11□□□□□ -0.63
APOE-205ENST00000485628 MRPL54Q6P161 138 aaKnown RBP11.11□□□□□ -0.63
APOE-205ENST00000485628 DPH3P1Q9H4G8 78 aa11.11□□□□□ -0.63
APOE-205ENST00000485628 DYNC2H1Q8NCM8 4307 aaKnown RBP11.11□□□□□ -0.63
APOE-205ENST00000485628 CSMD3Q7Z407 3707 aa11.11□□□□□ -0.63
APOE-205ENST00000485628 IGHV3-53P01767 116 aa11.1□□□□□ -0.63
APOE-205ENST00000485628 TMEM88Q6PEY1 159 aa11.1□□□□□ -0.63
APOE-205ENST00000485628 VSIG2Q96IQ7 327 aa11.1□□□□□ -0.63
APOE-205ENST00000485628 DEFB131BA0A096LNP1 70 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 TGIF2-C20orf24A0A0A6YYL0 155 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 TRAV10A0A0B4J240 114 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 TRBV6-4A0A1B0GX49 114 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 RAB4AP20338 218 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 CRYBA4P53673 196 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 RAB4BP61018 213 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 FAM104BQ5XKR9 115 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 TMEM136Q6ZRR5 245 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 FRZBQ92765 325 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 WWC2-AS2Q96NR7 200 aa11.09□□□□□ -0.63
APOE-205ENST00000485628 H3BNG1 76 aa11.08□□□□□ -0.64
APOE-205ENST00000485628 SCO1O75880 301 aa11.08□□□□□ -0.64
APOE-205ENST00000485628 S100A8P05109 93 aa11.08□□□□□ -0.64
APOE-205ENST00000485628 CAMPP49913 170 aa11.08□□□□□ -0.64
APOE-205ENST00000485628 SLAQ13239 276 aa11.08□□□□□ -0.64
APOE-205ENST00000485628 PHLDA1Q8WV24 401 aaPredicted RBP11.08□□□□□ -0.64
APOE-205ENST00000485628 PRO0255Q9UI72 69 aa11.08□□□□□ -0.64
APOE-205ENST00000485628 IGHV3-73A0A0B4J1V6 119 aa11.07□□□□□ -0.64
APOE-205ENST00000485628 COLCA2A8K830 154 aa11.07□□□□□ -0.64
APOE-205ENST00000485628 M0QY20 66 aa11.07□□□□□ -0.64
APOE-205ENST00000485628 FAM74A4Q5TZK3 123 aa11.07□□□□□ -0.64
APOE-205ENST00000485628 SLC25A29Q8N8R3 303 aa11.07□□□□□ -0.64
APOE-205ENST00000485628 FAM210BQ96KR6 192 aa11.07□□□□□ -0.64
APOE-205ENST00000485628 GNB1LQ9BYB4 327 aa11.07□□□□□ -0.64
APOE-205ENST00000485628 Q9UF83 564 aa11.07□□□□□ -0.64
APOE-205ENST00000485628 HHLA3Q9XRX5 114 aa11.07□□□□□ -0.64
APOE-205ENST00000485628 LINC00694P0DN24 101 aa11.06□□□□□ -0.64
APOE-205ENST00000485628 COX19Q49B96 90 aa11.06□□□□□ -0.64
APOE-205ENST00000485628 AMN1Q8IY45 258 aa11.06□□□□□ -0.64
APOE-205ENST00000485628 TRGV4A0A0C4DH28 118 aa11.05□□□□□ -0.64
APOE-205ENST00000485628 F5H768 121 aa11.05□□□□□ -0.64
APOE-205ENST00000485628 SMIM17P0DL12 118 aa11.05□□□□□ -0.64
APOE-205ENST00000485628 SUMO4Q6EEV6 95 aa11.05□□□□□ -0.64
APOE-205ENST00000485628 CEMP1Q6PRD7 247 aaPredicted RBP11.05□□□□□ -0.64
APOE-205ENST00000485628 SMIM15Q7Z3B0 74 aa11.05□□□□□ -0.64
APOE-205ENST00000485628 TRBV10-1A0A0K0K1A3 114 aa11.04□□□□□ -0.64
APOE-205ENST00000485628 GAS8-AS1O95177 125 aa11.04□□□□□ -0.64
APOE-205ENST00000485628 MRPL51Q4U2R6 128 aaKnown RBP11.04□□□□□ -0.64
APOE-205ENST00000485628 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
APOE-205ENST00000485628 STARD9Q9P2P6 4700 aa11.04□□□□□ -0.64
APOE-205ENST00000485628 TRAV26-1A0A087WT03 109 aa11.03□□□□□ -0.64
APOE-205ENST00000485628 K7EQD1 137 aa11.03□□□□□ -0.64
APOE-205ENST00000485628 HLA-DQA1P01909 254 aa11.03□□□□□ -0.64
APOE-205ENST00000485628 MRAP2Q96G30 205 aa11.03□□□□□ -0.64
APOE-205ENST00000485628 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
APOE-205ENST00000485628 PAX4O43316 350 aa11.02□□□□□ -0.65
APOE-205ENST00000485628 MGPP08493 103 aa11.02□□□□□ -0.65
APOE-205ENST00000485628 P0DMU3 169 aa11.02□□□□□ -0.65
APOE-205ENST00000485628 FAM231AP0DMU4 169 aa11.02□□□□□ -0.65
APOE-205ENST00000485628 FAM231CP0DMU5 169 aa11.02□□□□□ -0.65
APOE-205ENST00000485628 HTN3P15516 51 aa11.02□□□□□ -0.65
APOE-205ENST00000485628 RHOHQ15669 191 aa11.02□□□□□ -0.65
APOE-205ENST00000485628 ZNF56Q15929 161 aa11.02□□□□□ -0.65
APOE-205ENST00000485628 LOC100131303A0A0U1RQF7 123 aa11.01□□□□□ -0.65
APOE-205ENST00000485628 NUPR2A6NF83 97 aa11.01□□□□□ -0.65
APOE-205ENST00000485628 MT-ND6P03923 174 aa11.01□□□□□ -0.65
APOE-205ENST00000485628 NRACQ8N912 160 aa11.01□□□□□ -0.65
APOE-205ENST00000485628 NEXN-AS1Q8NBZ9 246 aa11.01□□□□□ -0.65
APOE-205ENST00000485628 A0A096LPF7 62 aa11□□□□□ -0.65
APOE-205ENST00000485628 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
APOE-205ENST00000485628 F5H697 171 aa11□□□□□ -0.65
APOE-205ENST00000485628 PHOX2AO14813 284 aa11□□□□□ -0.65
APOE-205ENST00000485628 RPS10P46783 165 aaKnown RBP11□□□□□ -0.65
APOE-205ENST00000485628 PRADC1Q9BSG0 188 aa11□□□□□ -0.65
APOE-205ENST00000485628 NIT2Q9NQR4 276 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms