RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 Q0VG73 95 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 INSL4Q14641 139 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 PPP1R1CQ8WVI7 109 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 LCN9Q8WX39 176 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 CDC42SE1Q9NRR8 79 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 MRPL36Q9P0J6 103 aaKnown RBP1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 TMEM14CQ9P0S9 112 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 ZFC3H1O60293 1989 aaKnown RBP1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 SCAPERQ9BY12 1400 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 LAMB1P07942 1786 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 KIAA2026Q5HYC2 2103 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 ADGRB2O60241 1585 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 ALPK3Q96L96 1907 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 TRAV13-2A0A0B4J235 113 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 HIGD1CA8MV81 97 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 SIX6O95475 246 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 PPYP01298 95 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 IGKCP01834 107 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 GYPAP02724 150 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 CCKP06307 115 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 RBM3P98179 157 aaKnown RBP1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 SPRNQ5BIV9 151 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 CSAG1Q6PB30 78 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 REG4Q9BYZ8 158 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 LINC00312Q9Y6C7 94 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 SCN3AQ9NY46 2000 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 PXDNQ92626 1479 aa1.31□□□□□ -2.2
LAPTM4A-202ENST00000483117 FREM3P0C091 2139 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 KIAA1551Q9HCM1 1747 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 LOC110117498A0A087WWA1 95 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 TRBV7-1A0A0A6YYK4 115 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 TRAV12-3A0A0B4J271 114 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 RBAKDNA6NC62 111 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 HCG22E2RYF7 251 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 J3QRE1 110 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 ATOX1O00244 68 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 NDUFC1O43677 76 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 SNCAP37840 140 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 S100A7L2Q5SY68 101 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 LINC00322Q6ZN03 302 aaPredicted RBP1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 CYP2G1PQ6ZSU1 146 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 IFI27L1Q96BM0 104 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 ODF3Q96PU9 254 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 MGST2Q99735 147 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 CASKIN1Q8WXD9 1431 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 ARHGAP35Q9NRY4 1499 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 CDK12Q9NYV4 1490 aaPredicted RBP1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 MUC4Q99102 2169 aa1.3□□□□□ -2.2
LAPTM4A-202ENST00000483117 CASZ1Q86V15 1759 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 IGKV3-7A0A075B6H7 116 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 TRGV2A0A075B6R0 118 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 IGLC1P0CG04 106 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 SPATA45Q537H7 98 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 C6orf52Q5T4I8 152 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 DEFB132Q7Z7B7 95 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 SPTSSBQ8NFR3 76 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 AMELYQ99218 206 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 CYSTM1Q9H1C7 97 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 ABCC5O15440 1437 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 PRDM2Q13029 1718 aa1.29□□□□□ -2.2
LAPTM4A-202ENST00000483117 SDK2Q58EX2 2172 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 GNGT2O14610 69 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 IGLV3-1P01715 115 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 MT-ATP8P03928 68 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 UBE2D1P51668 147 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 GNG11P61952 73 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 KRTAP6-3Q3LI67 103 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 PYY3Q5JQD4 70 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 GDF5OSQ5U4N7 250 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 Q6ZRN7 208 aaPredicted RBP1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 PMCHL2Q9BQD1 86 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 BET1LQ9NYM9 111 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 UACAQ9BZF9 1416 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 RRBP1Q9P2E9 1410 aaKnown RBP1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 PRDM15P57071 1507 aaPredicted RBP1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 ZNF142P52746 1687 aaPredicted RBP1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 TOPAZ1Q8N9V7 1692 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 TNS1Q9HBL0 1735 aaKnown RBP1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 PLXNA2O75051 1894 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 ANK1P16157 1881 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 HEATR5BQ9P2D3 2071 aa1.28□□□□□ -2.2
LAPTM4A-202ENST00000483117 ZFHX2Q9C0A1 2572 aaPredicted RBP1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 MCM3APO60318 1980 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 PLXNA4Q9HCM2 1894 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 LTBP2Q14767 1821 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 ROBO1Q9Y6N7 1651 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 CC2D2AQ9P2K1 1620 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 ARHGEF12Q9NZN5 1544 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 BLMP54132 1417 aaPredicted RBP1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 TRBV7-7A0A0K0K1E9 115 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 DNAL4O96015 105 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 IL9P15248 144 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 ELOF1P60002 83 aaKnown RBP1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 SSBP1Q04837 148 aaKnown RBP1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 FAM74A4Q5TZK3 123 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 C10orf82Q8WW14 230 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 FAM167A-AS1Q96KT0 104 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 LIMD2Q9BT23 127 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 WFDC10AQ9H1F0 79 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 RABAC1Q9UI14 185 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms