RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 GNLYP22749 145 aa13.59□□□□□ -0.23
SSR4-209ENST00000482902 ZFHX3Q15911 3703 aa13.59□□□□□ -0.23
SSR4-209ENST00000482902 S100A4P26447 101 aaKnown RBP13.59□□□□□ -0.23
SSR4-209ENST00000482902 RPL11P62913 178 aaKnown RBP13.59□□□□□ -0.23
SSR4-209ENST00000482902 TEX29Q8N6K0 151 aa13.59□□□□□ -0.23
SSR4-209ENST00000482902 CRYGDP07320 174 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 IGHV4-38-2P0DP08 117 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 Q6ZS46 218 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 C11orf86A6NJI1 115 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 TMEM262E9PQX1 116 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 IGHV3-30P01768 117 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 IGHV3-30-5P0DP03 117 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 SRD5A1P18405 259 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 C10orf126Q8N4M7 172 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 PIMREGQ9BSJ6 248 aa13.58□□□□□ -0.24
SSR4-209ENST00000482902 IGLV4-69A0A075B6H9 119 aa13.57□□□□□ -0.24
SSR4-209ENST00000482902 USMG5Q96IX5 58 aa13.57□□□□□ -0.24
SSR4-209ENST00000482902 IGKV3-7A0A075B6H7 116 aa13.56□□□□□ -0.24
SSR4-209ENST00000482902 ASIPP42127 132 aa13.56□□□□□ -0.24
SSR4-209ENST00000482902 ANXA2RQ3ZCQ2 193 aa13.56□□□□□ -0.24
SSR4-209ENST00000482902 F6UB75 175 aa13.56□□□□□ -0.24
SSR4-209ENST00000482902 H3BUX3 64 aa13.56□□□□□ -0.24
SSR4-209ENST00000482902 IGHG2P01859 326 aa13.56□□□□□ -0.24
SSR4-209ENST00000482902 PF4V1P10720 104 aa13.56□□□□□ -0.24
SSR4-209ENST00000482902 PHLDA3Q9Y5J5 127 aa13.56□□□□□ -0.24
SSR4-209ENST00000482902 ABCA2Q9BZC7 2435 aa13.56□□□□□ -0.24
SSR4-209ENST00000482902 B5MCH6 92 aa13.55□□□□□ -0.24
SSR4-209ENST00000482902 RNASE4P34096 147 aaKnown RBP13.55□□□□□ -0.24
SSR4-209ENST00000482902 TSPEAR-AS2P59090 65 aa13.55□□□□□ -0.24
SSR4-209ENST00000482902 C14orf178Q8N769 122 aaPredicted RBP13.55□□□□□ -0.24
SSR4-209ENST00000482902 H3BUA1 57 aa13.55□□□□□ -0.24
SSR4-209ENST00000482902 DUSP14O95147 198 aaKnown RBP13.55□□□□□ -0.24
SSR4-209ENST00000482902 DPH3P1Q9H4G8 78 aa13.55□□□□□ -0.24
SSR4-209ENST00000482902 RHODO00212 210 aa13.54□□□□□ -0.24
SSR4-209ENST00000482902 TSHBP01222 138 aa13.54□□□□□ -0.24
SSR4-209ENST00000482902 BLCAPP62952 87 aa13.54□□□□□ -0.24
SSR4-209ENST00000482902 A6NDX4 124 aa13.54□□□□□ -0.24
SSR4-209ENST00000482902 SLC25A29Q8N8R3 303 aa13.54□□□□□ -0.24
SSR4-209ENST00000482902 FAM19A4Q96LR4 140 aa13.54□□□□□ -0.24
SSR4-209ENST00000482902 PRO1854Q9UHT4 67 aa13.54□□□□□ -0.24
SSR4-209ENST00000482902 M0QXV9 152 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 SLC25A20O43772 301 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 BRI3O95415 125 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 EMP1P54849 157 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 RHPN1-AS1Q9BWJ2 59 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 GNRH2O43555 120 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 MGPP08493 103 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 SCGB1C2P0DMR2 95 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 HERVK_113P61574 105 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 C10orf105Q8TEF2 133 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 PRORYQ9H606 182 aa13.53□□□□□ -0.24
SSR4-209ENST00000482902 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.24
SSR4-209ENST00000482902 NCOR2Q9Y618 2525 aa13.52□□□□□ -0.24
SSR4-209ENST00000482902 CCL19Q99731 98 aa13.52□□□□□ -0.24
SSR4-209ENST00000482902 AMELXQ99217 191 aa13.52□□□□□ -0.25
SSR4-209ENST00000482902 CHD8Q9HCK8 2581 aa13.51□□□□□ -0.25
SSR4-209ENST00000482902 C9JAW5 83 aa13.51□□□□□ -0.25
SSR4-209ENST00000482902 EIF4EBP3O60516 100 aaPredicted RBP13.51□□□□□ -0.25
SSR4-209ENST00000482902 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
SSR4-209ENST00000482902 NDUFV3P56181 108 aaKnown RBP13.51□□□□□ -0.25
SSR4-209ENST00000482902 APRG1Q8IVJ8 170 aa13.51□□□□□ -0.25
SSR4-209ENST00000482902 RNASE3P12724 160 aaKnown RBP13.5□□□□□ -0.25
SSR4-209ENST00000482902 PAPPA-AS1Q5QFB9 102 aa13.5□□□□□ -0.25
SSR4-209ENST00000482902 TRAV4A0A0B4J268 109 aa13.5□□□□□ -0.25
SSR4-209ENST00000482902 IGIPA6NJ69 53 aa13.5□□□□□ -0.25
SSR4-209ENST00000482902 CRLF1O75462 422 aa13.5□□□□□ -0.25
SSR4-209ENST00000482902 VPS13CQ709C8 3753 aa13.49□□□□□ -0.25
SSR4-209ENST00000482902 GAGE2BQ13066 116 aa13.49□□□□□ -0.25
SSR4-209ENST00000482902 GAGE2EQ4V326 116 aa13.49□□□□□ -0.25
SSR4-209ENST00000482902 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
SSR4-209ENST00000482902 DAZ1Q9NQZ3 744 aaKnown RBP13.49□□□□□ -0.25
SSR4-209ENST00000482902 GAGE2DQ9UEU5 116 aa13.49□□□□□ -0.25
SSR4-209ENST00000482902 TP53TG1Q9Y2A0 90 aa13.49□□□□□ -0.25
SSR4-209ENST00000482902 SPTAN1Q13813 2472 aaKnown RBP13.49□□□□□ -0.25
SSR4-209ENST00000482902 IGHV4-30-2A0A087WSY4 118 aa13.49□□□□□ -0.25
SSR4-209ENST00000482902 IGLV1-40P01703 118 aa13.49□□□□□ -0.25
SSR4-209ENST00000482902 CELSR1Q9NYQ6 3014 aa13.48□□□□□ -0.25
SSR4-209ENST00000482902 PMVKQ15126 192 aa13.48□□□□□ -0.25
SSR4-209ENST00000482902 RAX2Q96IS3 184 aa13.48□□□□□ -0.25
SSR4-209ENST00000482902 TRBV7-9A0A0J9YWB2 115 aa13.48□□□□□ -0.25
SSR4-209ENST00000482902 IGHV3-33P01772 117 aa13.48□□□□□ -0.25
SSR4-209ENST00000482902 EDN2P20800 178 aa13.48□□□□□ -0.25
SSR4-209ENST00000482902 ATP5J2P56134 94 aa13.48□□□□□ -0.25
SSR4-209ENST00000482902 SNCGO76070 127 aa13.47□□□□□ -0.25
SSR4-209ENST00000482902 A4D1N5 150 aa13.47□□□□□ -0.25
SSR4-209ENST00000482902 CCDC179H3BU77 68 aa13.47□□□□□ -0.25
SSR4-209ENST00000482902 MSMBP08118 114 aa13.47□□□□□ -0.25
SSR4-209ENST00000482902 ZNRF2Q8NHG8 242 aa13.46□□□□□ -0.25
SSR4-209ENST00000482902 TMEM263Q8WUH6 116 aaKnown RBP13.46□□□□□ -0.25
SSR4-209ENST00000482902 PPP1R17O96001 155 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 TMEM170BQ5T4T1 132 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 Q8N1Y9 231 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 NTN5Q8WTR8 489 aaPredicted RBP13.45□□□□□ -0.26
SSR4-209ENST00000482902 GAGE12JA6NER3 117 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 J3QQQ9 107 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 GAGE7O76087 117 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 GAGE12FP0CL80 117 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 GAGE12GP0CL81 117 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 GAGE12IP0CL82 117 aa13.45□□□□□ -0.26
SSR4-209ENST00000482902 RPL39P62891 51 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 489.3 ms