RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SAMD10Q9BYL1 202 aa10.38□□□□□ -0.75
CDK9-203ENST00000480353 CDPF1Q6NVV7 123 aa10.37□□□□□ -0.75
CDK9-203ENST00000480353 Q6ZSN1 163 aa10.37□□□□□ -0.75
CDK9-203ENST00000480353 C14orf178Q8N769 122 aaPredicted RBP10.37□□□□□ -0.75
CDK9-203ENST00000480353 SFRP2Q96HF1 295 aa10.37□□□□□ -0.75
CDK9-203ENST00000480353 URGCP-MRPS24S4R325 110 aa10.37□□□□□ -0.75
CDK9-203ENST00000480353 DYNC1H1Q14204 4646 aaKnown RBP10.37□□□□□ -0.75
CDK9-203ENST00000480353 A0A087WTM6 91 aa10.36□□□□□ -0.75
CDK9-203ENST00000480353 A0A087WWC5 75 aa10.36□□□□□ -0.75
CDK9-203ENST00000480353 IFNA1P01562 189 aa10.36□□□□□ -0.75
CDK9-203ENST00000480353 KCNIP4Q6PIL6 250 aa10.36□□□□□ -0.75
CDK9-203ENST00000480353 DAZAP1Q96EP5 407 aaKnown RBP10.36□□□□□ -0.75
CDK9-203ENST00000480353 IBA57-AS1B1ANH7 110 aa10.35□□□□□ -0.75
CDK9-203ENST00000480353 ZNF56Q15929 161 aa10.35□□□□□ -0.75
CDK9-203ENST00000480353 SPANXN1Q5VSR9 72 aa10.35□□□□□ -0.75
CDK9-203ENST00000480353 RYR1P21817 5038 aa10.34□□□□□ -0.75
CDK9-203ENST00000480353 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
CDK9-203ENST00000480353 RPL35P42766 123 aaKnown RBP10.34□□□□□ -0.75
CDK9-203ENST00000480353 SSTP61278 116 aa10.34□□□□□ -0.75
CDK9-203ENST00000480353 RPL36AP83881 106 aaKnown RBP10.34□□□□□ -0.75
CDK9-203ENST00000480353 RPL19P84098 196 aaKnown RBP10.34□□□□□ -0.75
CDK9-203ENST00000480353 TOR2AQ5JU69 321 aa10.34□□□□□ -0.75
CDK9-203ENST00000480353 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
CDK9-203ENST00000480353 TCTE3Q8IZS6 198 aa10.34□□□□□ -0.75
CDK9-203ENST00000480353 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.34□□□□□ -0.75
CDK9-203ENST00000480353 RPL36ALQ969Q0 106 aaKnown RBP10.34□□□□□ -0.75
CDK9-203ENST00000480353 TM2D2Q9BX73 214 aa10.34□□□□□ -0.75
CDK9-203ENST00000480353 SCRT2Q9NQ03 307 aa10.34□□□□□ -0.75
CDK9-203ENST00000480353 CXCL1P09341 107 aa10.33□□□□□ -0.76
CDK9-203ENST00000480353 FUSP35637 526 aaKnown RBP eCLIP10.33□□□□□ -0.76
CDK9-203ENST00000480353 SLC51BQ86UW2 128 aa10.33□□□□□ -0.76
CDK9-203ENST00000480353 TRAV1-1A0A0B4J248 108 aa10.32□□□□□ -0.76
CDK9-203ENST00000480353 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
CDK9-203ENST00000480353 F5H697 171 aa10.32□□□□□ -0.76
CDK9-203ENST00000480353 SULT1A2P50226 295 aa10.32□□□□□ -0.76
CDK9-203ENST00000480353 CCL20P78556 96 aa10.32□□□□□ -0.76
CDK9-203ENST00000480353 LAGE3Q14657 143 aa10.32□□□□□ -0.76
CDK9-203ENST00000480353 MLST8Q9BVC4 326 aa10.32□□□□□ -0.76
CDK9-203ENST00000480353 TRAV8-3A0A0A6YYJ7 113 aa10.31□□□□□ -0.76
CDK9-203ENST00000480353 PDE6DO43924 150 aa10.31□□□□□ -0.76
CDK9-203ENST00000480353 C1QBP02746 253 aa10.31□□□□□ -0.76
CDK9-203ENST00000480353 LINC00694P0DN24 101 aa10.31□□□□□ -0.76
CDK9-203ENST00000480353 GNG4P50150 75 aa10.31□□□□□ -0.76
CDK9-203ENST00000480353 RAB4BP61018 213 aa10.31□□□□□ -0.76
CDK9-203ENST00000480353 CENPWQ5EE01 88 aa10.31□□□□□ -0.76
CDK9-203ENST00000480353 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
CDK9-203ENST00000480353 TPPP3Q9BW30 176 aa10.31□□□□□ -0.76
CDK9-203ENST00000480353 TRBV7-3A0A075B6L6 115 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 A0A087WX48 190 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 IGLV5-52A0A0A0MRZ9 124 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 MUC21A0A0G2JKD1 596 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 MUC21A0A140T8X8 626 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 RPS20P60866 119 aaKnown RBP10.3□□□□□ -0.76
CDK9-203ENST00000480353 MEF2BQ02080 365 aaPredicted RBP10.3□□□□□ -0.76
CDK9-203ENST00000480353 AKAP14Q86UN6 197 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 RMI2Q96E14 147 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 DERL1Q9BUN8 251 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 BIN3Q9NQY0 253 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 MED9Q9NWA0 146 aa10.3□□□□□ -0.76
CDK9-203ENST00000480353 hCG_2014768A0A024R1R8 64 aa10.29□□□□□ -0.76
CDK9-203ENST00000480353 XKRY2A2RUG3 117 aa10.29□□□□□ -0.76
CDK9-203ENST00000480353 OR5AL1P0C617 328 aa10.29□□□□□ -0.76
CDK9-203ENST00000480353 AP1S3Q96PC3 154 aa10.29□□□□□ -0.76
CDK9-203ENST00000480353 Q9UF83 564 aa10.29□□□□□ -0.76
CDK9-203ENST00000480353 SNAI2O43623 268 aa10.28□□□□□ -0.76
CDK9-203ENST00000480353 GCSHP23434 173 aa10.28□□□□□ -0.76
CDK9-203ENST00000480353 ELOBQ15370 118 aa10.28□□□□□ -0.76
CDK9-203ENST00000480353 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
CDK9-203ENST00000480353 OR2D3Q8NGH3 330 aa10.28□□□□□ -0.76
CDK9-203ENST00000480353 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
CDK9-203ENST00000480353 TMEM262E9PQX1 116 aa10.27□□□□□ -0.77
CDK9-203ENST00000480353 P01737 135 aa10.27□□□□□ -0.77
CDK9-203ENST00000480353 BCL2P10415 239 aa10.27□□□□□ -0.77
CDK9-203ENST00000480353 TAGLN2P37802 199 aaKnown RBP10.27□□□□□ -0.77
CDK9-203ENST00000480353 Q8N1X5 172 aa10.27□□□□□ -0.77
CDK9-203ENST00000480353 Q8N3U1 123 aa10.27□□□□□ -0.77
CDK9-203ENST00000480353 NTN5Q8WTR8 489 aaPredicted RBP10.27□□□□□ -0.77
CDK9-203ENST00000480353 SMIM12Q96EX1 92 aa10.27□□□□□ -0.77
CDK9-203ENST00000480353 VAX2Q9UIW0 290 aa10.27□□□□□ -0.77
CDK9-203ENST00000480353 COX11Q9Y6N1 276 aa10.27□□□□□ -0.77
CDK9-203ENST00000480353 RAB19A4D1S5 217 aa10.26□□□□□ -0.77
CDK9-203ENST00000480353 MGPP08493 103 aa10.26□□□□□ -0.77
CDK9-203ENST00000480353 UBE2D3P61077 147 aa10.26□□□□□ -0.77
CDK9-203ENST00000480353 UBE2D2P62837 147 aa10.26□□□□□ -0.77
CDK9-203ENST00000480353 Q6ZNX1 250 aa10.26□□□□□ -0.77
CDK9-203ENST00000480353 Q8N814 137 aa10.26□□□□□ -0.77
CDK9-203ENST00000480353 FER1L6-AS1Q8NA97 138 aa10.26□□□□□ -0.77
CDK9-203ENST00000480353 SSBP4Q9BWG4 385 aaPredicted RBP10.26□□□□□ -0.77
CDK9-203ENST00000480353 LRCOL1A6NCL2 159 aa10.25□□□□□ -0.77
CDK9-203ENST00000480353 GZMBP10144 247 aa10.25□□□□□ -0.77
CDK9-203ENST00000480353 CACNG7P62955 275 aa10.25□□□□□ -0.77
CDK9-203ENST00000480353 NIT1Q86X76 327 aa10.25□□□□□ -0.77
CDK9-203ENST00000480353 OR10G8Q8NGN5 311 aa10.25□□□□□ -0.77
CDK9-203ENST00000480353 CHCHD7Q9BUK0 85 aa10.25□□□□□ -0.77
CDK9-203ENST00000480353 KLK12Q9UKR0 248 aa10.25□□□□□ -0.77
CDK9-203ENST00000480353 LRP1BQ9NZR2 4599 aa10.24□□□□□ -0.77
CDK9-203ENST00000480353 IGKV2D-24A0A075B6R9 120 aa10.24□□□□□ -0.77
CDK9-203ENST00000480353 RBFOX3A6NFN3 312 aa10.24□□□□□ -0.77
CDK9-203ENST00000480353 CRPP02741 224 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms