RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 RNASE8Q8TDE3 154 aaKnown RBP10.44□□□□□ -0.74
COL4A6-206ENST00000477085 G3V4G9 280 aa10.43□□□□□ -0.74
COL4A6-206ENST00000477085 CRYGDP07320 174 aa10.43□□□□□ -0.74
COL4A6-206ENST00000477085 S100A12P80511 92 aa10.43□□□□□ -0.74
COL4A6-206ENST00000477085 TMEM18Q96B42 140 aa10.43□□□□□ -0.74
COL4A6-206ENST00000477085 C1QTNF4Q9BXJ3 329 aa10.43□□□□□ -0.74
COL4A6-206ENST00000477085 DPH3P1Q9H4G8 78 aa10.43□□□□□ -0.74
COL4A6-206ENST00000477085 PLAC8L1A1L4L8 177 aa10.42□□□□□ -0.74
COL4A6-206ENST00000477085 ZNF415Q09FC8 603 aa10.42□□□□□ -0.74
COL4A6-206ENST00000477085 NRACQ8N912 160 aa10.42□□□□□ -0.74
COL4A6-206ENST00000477085 AP1S3Q96PC3 154 aa10.42□□□□□ -0.74
COL4A6-206ENST00000477085 GOLT1BQ9Y3E0 138 aa10.42□□□□□ -0.74
COL4A6-206ENST00000477085 M0R2P5 195 aa10.42□□□□□ -0.74
COL4A6-206ENST00000477085 CDPF1Q6NVV7 123 aa10.42□□□□□ -0.74
COL4A6-206ENST00000477085 SYT8Q8NBV8 401 aa10.42□□□□□ -0.74
COL4A6-206ENST00000477085 LOC389332A0A1B0GUA5 103 aa10.41□□□□□ -0.74
COL4A6-206ENST00000477085 TNFRSF6BO95407 300 aa10.41□□□□□ -0.74
COL4A6-206ENST00000477085 PPBPP02775 128 aa10.41□□□□□ -0.74
COL4A6-206ENST00000477085 IGHV4-30-4P0DP06 118 aa10.41□□□□□ -0.74
COL4A6-206ENST00000477085 PTH2Q96A98 100 aa10.41□□□□□ -0.74
COL4A6-206ENST00000477085 MGPP08493 103 aa10.4□□□□□ -0.74
COL4A6-206ENST00000477085 IFI27P40305 119 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-206ENST00000477085 JOSD1Q15040 202 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-206ENST00000477085 TMEM263Q8WUH6 116 aaKnown RBP10.4□□□□□ -0.74
COL4A6-206ENST00000477085 RASL10AQ92737 203 aa10.4□□□□□ -0.74
COL4A6-206ENST00000477085 MRPL16Q9NX20 251 aaKnown RBP10.4□□□□□ -0.74
COL4A6-206ENST00000477085 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.75
COL4A6-206ENST00000477085 LINC00614P0C842 121 aa10.39□□□□□ -0.75
COL4A6-206ENST00000477085 UFSP1Q6NVU6 142 aa10.39□□□□□ -0.75
COL4A6-206ENST00000477085 RNASEKQ6P5S7 137 aaKnown RBP10.39□□□□□ -0.75
COL4A6-206ENST00000477085 FAM19A2Q8N3H0 131 aa10.39□□□□□ -0.75
COL4A6-206ENST00000477085 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
COL4A6-206ENST00000477085 FAM74A4Q5TZK3 123 aa10.39□□□□□ -0.75
COL4A6-206ENST00000477085 RPL39LQ96EH5 51 aaKnown RBP10.39□□□□□ -0.75
COL4A6-206ENST00000477085 SPXQ9BT56 116 aa10.39□□□□□ -0.75
COL4A6-206ENST00000477085 KIR2DL5BA0A0G2JN68 375 aa10.38□□□□□ -0.75
COL4A6-206ENST00000477085 KIR2DL5BA0A0G2JPC4 375 aa10.38□□□□□ -0.75
COL4A6-206ENST00000477085 PMCHL1Q16048 86 aa10.38□□□□□ -0.75
COL4A6-206ENST00000477085 SAMD5Q5TGI4 173 aa10.38□□□□□ -0.75
COL4A6-206ENST00000477085 SUMO4Q6EEV6 95 aa10.38□□□□□ -0.75
COL4A6-206ENST00000477085 KIR2DL5AQ8N109 375 aa10.38□□□□□ -0.75
COL4A6-206ENST00000477085 KIR2DL5BQ8NHK3 375 aa10.38□□□□□ -0.75
COL4A6-206ENST00000477085 X6R8D5 127 aa10.38□□□□□ -0.75
COL4A6-206ENST00000477085 SMIM17P0DL12 118 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 PIK3CD-AS1Q5SR53 167 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 CFAP126Q5VTH2 177 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 LURAP1LQ8IV03 231 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 IGLV2-18A0A075B6J9 118 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 IGHV3-73A0A0B4J1V6 119 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 PMCHP20382 165 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 RRN3P1Q2M238 152 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 Q6ZSN1 163 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 Q6ZTI0 123 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 PRSS3P2Q8NHM4 247 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 CHCHD1Q96BP2 118 aaKnown RBP10.37□□□□□ -0.75
COL4A6-206ENST00000477085 C16orf74Q96GX8 76 aa10.37□□□□□ -0.75
COL4A6-206ENST00000477085 NOP10Q9NPE3 64 aaKnown RBP10.37□□□□□ -0.75
COL4A6-206ENST00000477085 PRSS47A8MTI9 375 aa10.36□□□□□ -0.75
COL4A6-206ENST00000477085 DAZ2Q13117 558 aaKnown RBP10.36□□□□□ -0.75
COL4A6-206ENST00000477085 TRGV1A0A0A0MS02 117 aa10.35□□□□□ -0.75
COL4A6-206ENST00000477085 M0QY20 66 aa10.35□□□□□ -0.75
COL4A6-206ENST00000477085 AMTP48728 403 aa10.35□□□□□ -0.75
COL4A6-206ENST00000477085 APOC4P55056 127 aa10.35□□□□□ -0.75
COL4A6-206ENST00000477085 DEFB135Q30KP9 77 aa10.35□□□□□ -0.75
COL4A6-206ENST00000477085 Q6ZWC4 215 aa10.35□□□□□ -0.75
COL4A6-206ENST00000477085 MAP1LC3AQ9H492 121 aa10.35□□□□□ -0.75
COL4A6-206ENST00000477085 IGHV1-24A0A0C4DH33 117 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 LINC01546A6NGU7 62 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 A8MWV9 139 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 F5H697 171 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 RS1O15537 224 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 HSBP1O75506 76 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 Q9UF83 564 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 A0A096LNJ9 63 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 ZNF56Q15929 161 aa10.34□□□□□ -0.75
COL4A6-206ENST00000477085 FA2HQ7L5A8 372 aa10.33□□□□□ -0.76
COL4A6-206ENST00000477085 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.76
COL4A6-206ENST00000477085 A8MZ25 164 aa10.32□□□□□ -0.76
COL4A6-206ENST00000477085 EMP1P54849 157 aa10.32□□□□□ -0.76
COL4A6-206ENST00000477085 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
COL4A6-206ENST00000477085 LGALS9BQ3B8N2 356 aa10.32□□□□□ -0.76
COL4A6-206ENST00000477085 Q8N8P6 123 aa10.32□□□□□ -0.76
COL4A6-206ENST00000477085 P0DMU3 169 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 FAM231AP0DMU4 169 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 FAM231CP0DMU5 169 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 LINC00173Q6ZV60 143 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 ZNF479Q96JC4 524 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 C20orf78Q9BR46 151 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 NDUFAF3Q9BU61 184 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 NACAE9PAV3 2078 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 LINC00587B1AMM8 73 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 PRB2P02812 416 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-206ENST00000477085 OR11H2Q8NH07 326 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 SMIM2Q9BVW6 85 aa10.31□□□□□ -0.76
COL4A6-206ENST00000477085 NXT2Q9NPJ8 142 aaKnown RBP10.31□□□□□ -0.76
COL4A6-206ENST00000477085 NBEAL1Q6ZS30 2694 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
COL4A6-206ENST00000477085 SMIM9A6NGZ8 99 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms