RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 Q86TA4 180 aa6.82□□□□□ -1.32
HDAC3-208ENST00000476739 NDFIP1Q9BT67 221 aa6.82□□□□□ -1.32
HDAC3-208ENST00000476739 MRPL16Q9NX20 251 aaKnown RBP6.82□□□□□ -1.32
HDAC3-208ENST00000476739 IGHV3-16A0A0C4DH30 117 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 ATP5G1P05496 136 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 SCGB1A1P11684 91 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 CRIP1P50238 77 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 TDRG1Q3Y452 100 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 PDZD11Q5EBL8 140 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 LGALS9CQ6DKI2 356 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 KCNIP4Q6PIL6 250 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 ALKBH7Q9BT30 221 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-208ENST00000476739 GNG13Q9P2W3 67 aa6.81□□□□□ -1.32
HDAC3-208ENST00000476739 IGKV3D-20A0A0C4DH25 116 aa6.8□□□□□ -1.32
HDAC3-208ENST00000476739 FBLL1A6NHQ2 334 aaKnown RBP6.8□□□□□ -1.32
HDAC3-208ENST00000476739 PFN1P07737 140 aaKnown RBP6.8□□□□□ -1.32
HDAC3-208ENST00000476739 TCTAP57738 103 aa6.8□□□□□ -1.32
HDAC3-208ENST00000476739 ZNF415Q09FC8 603 aa6.8□□□□□ -1.32
HDAC3-208ENST00000476739 TEX43Q6ZNM6 134 aa6.8□□□□□ -1.32
HDAC3-208ENST00000476739 NUDT11Q96G61 164 aa6.8□□□□□ -1.32
HDAC3-208ENST00000476739 ZC2HC1AQ96GY0 325 aa6.8□□□□□ -1.32
HDAC3-208ENST00000476739 FMC1Q96HJ9 113 aa6.8□□□□□ -1.32
HDAC3-208ENST00000476739 UQCR10Q9UDW1 63 aa6.8□□□□□ -1.32
HDAC3-208ENST00000476739 NAT8Q9UHE5 227 aa6.8□□□□□ -1.32
HDAC3-208ENST00000476739 TRGV11A0A075B6L2 103 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 TRGV2A0A075B6R0 118 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 TRAV9-1A0A075B6T8 112 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 TRBV6-1A0A0K0K1D8 114 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 PRSS47A8MTI9 375 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 ZNF727A8MUV8 499 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 TMEM238C9JI98 176 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 LTAP01374 205 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 IGHV3-53P01767 116 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 UBE2G1P62253 170 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 NHLRC2Q8NBF2 726 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 VPS25Q9BRG1 176 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 DERL1Q9BUN8 251 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 VAMP8Q9BV40 100 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 SDF2L1Q9HCN8 221 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 MANBALQ9NQG1 85 aa6.79□□□□□ -1.32
HDAC3-208ENST00000476739 MRPS16Q9Y3D3 137 aaKnown RBP6.79□□□□□ -1.32
HDAC3-208ENST00000476739 MUC4Q99102 2169 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 VPS13DQ5THJ4 4388 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 A0A0J9YY99 117 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 ESDP10768 282 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 LGALS9BQ3B8N2 356 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 MAJINQ3KP22 176 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 COX8CQ7Z4L0 72 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 ZNF575Q86XF7 245 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 MTURNQ8N3F0 131 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 OR4C5Q8NGB2 326 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 C18orf15Q96N68 181 aa6.78□□□□□ -1.32
HDAC3-208ENST00000476739 TRAV26-1A0A087WT03 109 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 FABP5P3A8MUU1 101 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 SH2D1AO60880 128 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 RNASE3P12724 160 aaKnown RBP6.77□□□□□ -1.33
HDAC3-208ENST00000476739 COX19Q49B96 90 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 POM121L12Q8N7R1 296 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 RASL10AQ92737 203 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 C11orf52Q96A22 123 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 KCNS1Q96KK3 526 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 MLST8Q9BVC4 326 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 URGCP-MRPS24S4R325 110 aa6.77□□□□□ -1.33
HDAC3-208ENST00000476739 NUDT3O95989 172 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 BCL2P10415 239 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 MEF2BQ02080 365 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-208ENST00000476739 FHL2Q14192 279 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 CFAP161Q6P656 301 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 VSIG2Q96IQ7 327 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 ZNF479Q96JC4 524 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 C9orf85Q96MD7 179 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 SPXQ9BT56 116 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 COX11Q9Y6N1 276 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 NACAE9PAV3 2078 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 DNAH6Q9C0G6 4158 aa6.76□□□□□ -1.33
HDAC3-208ENST00000476739 TMSB15BA0A087X1C1 80 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 GRIFINA4D1Z8 144 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 PGPEP1LA6NFU8 196 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 C9JCJ5 164 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 TMEM250H0YL14 139 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 M0R2P5 195 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 IGLV2-8P01709 118 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 ORM1P02763 201 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 P0DMU3 169 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 FAM162BQ5T6X4 162 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 BAGE2Q86Y30 109 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 C15orf53Q8NAA6 179 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 LAMTOR2Q9Y2Q5 125 aa6.75□□□□□ -1.33
HDAC3-208ENST00000476739 CCL25O15444 150 aa6.74□□□□□ -1.33
HDAC3-208ENST00000476739 HNRNPA3P51991 378 aaKnown RBP6.74□□□□□ -1.33
HDAC3-208ENST00000476739 PMCHL1Q16048 86 aa6.74□□□□□ -1.33
HDAC3-208ENST00000476739 LINC01559Q495D7 138 aa6.74□□□□□ -1.33
HDAC3-208ENST00000476739 CENPWQ5EE01 88 aa6.74□□□□□ -1.33
HDAC3-208ENST00000476739 TXNDC17Q9BRA2 123 aa6.74□□□□□ -1.33
HDAC3-208ENST00000476739 TRBV20OR9-2A0A075B6H5 130 aa6.73□□□□□ -1.33
HDAC3-208ENST00000476739 A0A096LPF7 62 aa6.73□□□□□ -1.33
HDAC3-208ENST00000476739 H3BVH4 76 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms