RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 SOHLH1Q5JUK2 328 aa10.33□□□□□ -0.76
DFFA-203ENST00000476658 C1orf134Q5TEV5 83 aa10.33□□□□□ -0.76
DFFA-203ENST00000476658 UFSP1Q6NVU6 142 aa10.33□□□□□ -0.76
DFFA-203ENST00000476658 FER1L6-AS1Q8NA97 138 aa10.33□□□□□ -0.76
DFFA-203ENST00000476658 NUDT10Q8NFP7 164 aa10.33□□□□□ -0.76
DFFA-203ENST00000476658 NUDT11Q96G61 164 aa10.33□□□□□ -0.76
DFFA-203ENST00000476658 DNAH17Q9UFH2 4485 aa10.33□□□□□ -0.76
DFFA-203ENST00000476658 SIVA1O15304 175 aa10.32□□□□□ -0.76
DFFA-203ENST00000476658 CRYGDP07320 174 aa10.32□□□□□ -0.76
DFFA-203ENST00000476658 SRP19P09132 144 aaKnown RBP10.32□□□□□ -0.76
DFFA-203ENST00000476658 TTC32Q5I0X7 151 aa10.32□□□□□ -0.76
DFFA-203ENST00000476658 C14orf178Q8N769 122 aaPredicted RBP10.32□□□□□ -0.76
DFFA-203ENST00000476658 SMIM7Q9BQ49 75 aa10.32□□□□□ -0.76
DFFA-203ENST00000476658 RNASE7Q9H1E1 156 aaKnown RBP10.32□□□□□ -0.76
DFFA-203ENST00000476658 GAGE12JA6NER3 117 aa10.31□□□□□ -0.76
DFFA-203ENST00000476658 RTL8CO15255 209 aa10.31□□□□□ -0.76
DFFA-203ENST00000476658 NDUFS6O75380 124 aaKnown RBP10.31□□□□□ -0.76
DFFA-203ENST00000476658 IGLC6P0CF74 106 aa10.31□□□□□ -0.76
DFFA-203ENST00000476658 GAGE1Q13065 139 aa10.31□□□□□ -0.76
DFFA-203ENST00000476658 GAGE4Q13068 117 aa10.31□□□□□ -0.76
DFFA-203ENST00000476658 GAGE5Q13069 117 aa10.31□□□□□ -0.76
DFFA-203ENST00000476658 GAGE13Q4V321 117 aa10.31□□□□□ -0.76
DFFA-203ENST00000476658 LINC00336Q6ZUF6 198 aa10.31□□□□□ -0.76
DFFA-203ENST00000476658 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
DFFA-203ENST00000476658 ZNF56Q15929 161 aa10.3□□□□□ -0.76
DFFA-203ENST00000476658 ATP6V0E2Q8NHE4 81 aa10.3□□□□□ -0.76
DFFA-203ENST00000476658 RPP21Q9H633 154 aaKnown RBP10.3□□□□□ -0.76
DFFA-203ENST00000476658 SMIM17P0DL12 118 aa10.29□□□□□ -0.76
DFFA-203ENST00000476658 CACNG7P62955 275 aa10.29□□□□□ -0.76
DFFA-203ENST00000476658 WFDC10BQ8IUB3 73 aa10.29□□□□□ -0.76
DFFA-203ENST00000476658 C6orf223Q8N319 242 aa10.29□□□□□ -0.76
DFFA-203ENST00000476658 AP1S3Q96PC3 154 aa10.29□□□□□ -0.76
DFFA-203ENST00000476658 KRTAP1-5Q9BYS1 174 aa10.29□□□□□ -0.76
DFFA-203ENST00000476658 FAT2Q9NYQ8 4349 aa10.29□□□□□ -0.76
DFFA-203ENST00000476658 A0A1W2PPQ1 181 aa10.28□□□□□ -0.76
DFFA-203ENST00000476658 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
DFFA-203ENST00000476658 F2Z2F3 143 aa10.28□□□□□ -0.76
DFFA-203ENST00000476658 GATCO43716 136 aaKnown RBP10.28□□□□□ -0.76
DFFA-203ENST00000476658 TIRAPP58753 221 aa10.28□□□□□ -0.76
DFFA-203ENST00000476658 PEA15Q15121 130 aa10.28□□□□□ -0.76
DFFA-203ENST00000476658 LYZL1Q6UWQ5 148 aa10.28□□□□□ -0.76
DFFA-203ENST00000476658 GTSF1LQ9H1H1 148 aa10.28□□□□□ -0.76
DFFA-203ENST00000476658 Q9UF83 564 aa10.28□□□□□ -0.76
DFFA-203ENST00000476658 LY96Q9Y6Y9 160 aa10.28□□□□□ -0.76
DFFA-203ENST00000476658 F5H697 171 aa10.27□□□□□ -0.77
DFFA-203ENST00000476658 ERVFC1-1P60608 527 aa10.27□□□□□ -0.77
DFFA-203ENST00000476658 RAB4BP61018 213 aa10.27□□□□□ -0.77
DFFA-203ENST00000476658 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
DFFA-203ENST00000476658 TRAV8-6A0A0B4J262 113 aa10.26□□□□□ -0.77
DFFA-203ENST00000476658 LINC00694P0DN24 101 aa10.26□□□□□ -0.77
DFFA-203ENST00000476658 SRSF3P84103 164 aaKnown RBP10.26□□□□□ -0.77
DFFA-203ENST00000476658 FAM231DQ6ZW35 169 aa10.26□□□□□ -0.77
DFFA-203ENST00000476658 LINC01551Q86U37 167 aa10.26□□□□□ -0.77
DFFA-203ENST00000476658 MSRB1Q9NZV6 116 aa10.26□□□□□ -0.77
DFFA-203ENST00000476658 TRAV9-2A0A087WT02 112 aa10.25□□□□□ -0.77
DFFA-203ENST00000476658 TRBV10-1A0A0K0K1A3 114 aa10.25□□□□□ -0.77
DFFA-203ENST00000476658 C9JQL5 133 aa10.25□□□□□ -0.77
DFFA-203ENST00000476658 MGPP08493 103 aa10.25□□□□□ -0.77
DFFA-203ENST00000476658 EVI2AP22794 236 aa10.25□□□□□ -0.77
DFFA-203ENST00000476658 CTRLP40313 264 aa10.25□□□□□ -0.77
DFFA-203ENST00000476658 RAB14P61106 215 aa10.25□□□□□ -0.77
DFFA-203ENST00000476658 RPL36AP83881 106 aaKnown RBP10.25□□□□□ -0.77
DFFA-203ENST00000476658 FAM74A3Q4VXF1 159 aa10.25□□□□□ -0.77
DFFA-203ENST00000476658 LELP1Q5T871 98 aa10.25□□□□□ -0.77
DFFA-203ENST00000476658 RPL36ALQ969Q0 106 aaKnown RBP10.25□□□□□ -0.77
DFFA-203ENST00000476658 A8MWL6 223 aa10.24□□□□□ -0.77
DFFA-203ENST00000476658 TRGC1P0CF51 173 aa10.24□□□□□ -0.77
DFFA-203ENST00000476658 DNAH10OSP0CZ25 163 aa10.24□□□□□ -0.77
DFFA-203ENST00000476658 NTF3P20783 257 aa10.24□□□□□ -0.77
DFFA-203ENST00000476658 TMEM241Q24JQ0 296 aa10.24□□□□□ -0.77
DFFA-203ENST00000476658 SMDT1Q9H4I9 107 aa10.24□□□□□ -0.77
DFFA-203ENST00000476658 KIF25-AS1Q9Y6Z4 181 aa10.24□□□□□ -0.77
DFFA-203ENST00000476658 IGHV3-38A0A0C4DH36 116 aa10.23□□□□□ -0.77
DFFA-203ENST00000476658 LINC00315P59091 139 aa10.23□□□□□ -0.77
DFFA-203ENST00000476658 TWIST1Q15672 202 aa10.23□□□□□ -0.77
DFFA-203ENST00000476658 WDR73Q6P4I2 378 aa10.23□□□□□ -0.77
DFFA-203ENST00000476658 GTSF1Q8WW33 167 aa10.23□□□□□ -0.77
DFFA-203ENST00000476658 HECTD4Q9Y4D8 3996 aa10.23□□□□□ -0.77
DFFA-203ENST00000476658 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
DFFA-203ENST00000476658 ADIRFQ15847 76 aa10.22□□□□□ -0.77
DFFA-203ENST00000476658 CT83Q5H943 113 aa10.22□□□□□ -0.77
DFFA-203ENST00000476658 NEXN-AS1Q8NBZ9 246 aa10.22□□□□□ -0.77
DFFA-203ENST00000476658 OSTCQ9NRP0 149 aa10.22□□□□□ -0.77
DFFA-203ENST00000476658 NAT8Q9UHE5 227 aa10.22□□□□□ -0.77
DFFA-203ENST00000476658 BIRC6Q9NR09 4857 aa10.22□□□□□ -0.77
DFFA-203ENST00000476658 A0A087WWC5 75 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 K7EP13 123 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 BTF3P20290 206 aaKnown RBP10.21□□□□□ -0.77
DFFA-203ENST00000476658 UBE2D3P61077 147 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 RPL23P62829 140 aaKnown RBP10.21□□□□□ -0.77
DFFA-203ENST00000476658 UBE2D2P62837 147 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 TNP2Q05952 138 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 C15orf54Q8N8G6 183 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 OR10G8Q8NGN5 311 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 PGLYRP4Q96LB8 373 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 CNFNQ9BYD5 112 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 DPH3P1Q9H4G8 78 aa10.21□□□□□ -0.77
DFFA-203ENST00000476658 IGHV3-30P01768 117 aa10.2□□□□□ -0.78
DFFA-203ENST00000476658 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
DFFA-203ENST00000476658 IGHV3-30-3P0DP02 117 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms