RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 PHLDA3Q9Y5J5 127 aa10.43□□□□□ -0.74
VARS-223ENST00000474643 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
VARS-223ENST00000474643 K7EN84 100 aa10.42□□□□□ -0.74
VARS-223ENST00000474643 NXPH4O95158 308 aa10.42□□□□□ -0.74
VARS-223ENST00000474643 P01737 135 aa10.42□□□□□ -0.74
VARS-223ENST00000474643 ARMS2P0C7Q2 107 aa10.42□□□□□ -0.74
VARS-223ENST00000474643 CRYBA4P53673 196 aa10.42□□□□□ -0.74
VARS-223ENST00000474643 RPL23P62829 140 aaKnown RBP10.42□□□□□ -0.74
VARS-223ENST00000474643 OSTCQ9NRP0 149 aa10.42□□□□□ -0.74
VARS-223ENST00000474643 CARHSP1Q9Y2V2 147 aaKnown RBP10.42□□□□□ -0.74
VARS-223ENST00000474643 TRAV9-2A0A087WT02 112 aa10.41□□□□□ -0.74
VARS-223ENST00000474643 IGHV3-73A0A0B4J1V6 119 aa10.41□□□□□ -0.74
VARS-223ENST00000474643 F8W036 122 aa10.41□□□□□ -0.74
VARS-223ENST00000474643 BTF3P20290 206 aaKnown RBP10.41□□□□□ -0.74
VARS-223ENST00000474643 SRIP30626 198 aa10.41□□□□□ -0.74
VARS-223ENST00000474643 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
VARS-223ENST00000474643 NEGR1Q7Z3B1 354 aa10.41□□□□□ -0.74
VARS-223ENST00000474643 PTH2Q96A98 100 aa10.41□□□□□ -0.74
VARS-223ENST00000474643 ISOC2Q96AB3 205 aa10.41□□□□□ -0.74
VARS-223ENST00000474643 KRTAP1-5Q9BYS1 174 aa10.41□□□□□ -0.74
VARS-223ENST00000474643 DYNC1H1Q14204 4646 aaKnown RBP10.4□□□□□ -0.74
VARS-223ENST00000474643 FAM231BA6NCW3 169 aa10.4□□□□□ -0.74
VARS-223ENST00000474643 A8MWV9 139 aa10.4□□□□□ -0.74
VARS-223ENST00000474643 RS1O15537 224 aa10.4□□□□□ -0.74
VARS-223ENST00000474643 CIDEAO60543 219 aa10.4□□□□□ -0.74
VARS-223ENST00000474643 LINC00315P59091 139 aa10.4□□□□□ -0.74
VARS-223ENST00000474643 PIK3CD-AS1Q5SR53 167 aa10.4□□□□□ -0.74
VARS-223ENST00000474643 CFAP126Q5VTH2 177 aa10.4□□□□□ -0.74
VARS-223ENST00000474643 NUDT10Q8NFP7 164 aa10.4□□□□□ -0.74
VARS-223ENST00000474643 NUDT11Q96G61 164 aa10.4□□□□□ -0.74
VARS-223ENST00000474643 M0R381 172 aa10.39□□□□□ -0.75
VARS-223ENST00000474643 PPP1R2P9O14990 202 aa10.39□□□□□ -0.75
VARS-223ENST00000474643 GYPEP15421 78 aa10.39□□□□□ -0.75
VARS-223ENST00000474643 ERVFC1-1P60608 527 aa10.39□□□□□ -0.75
VARS-223ENST00000474643 MAPKAPK5-AS1Q8N8E1 139 aa10.39□□□□□ -0.75
VARS-223ENST00000474643 C15orf54Q8N8G6 183 aa10.39□□□□□ -0.75
VARS-223ENST00000474643 SFRP2Q96HF1 295 aa10.39□□□□□ -0.75
VARS-223ENST00000474643 A8MWL6 223 aa10.38□□□□□ -0.75
VARS-223ENST00000474643 CDK2AP2O75956 126 aa10.38□□□□□ -0.75
VARS-223ENST00000474643 ADCYAP1P18509 176 aa10.38□□□□□ -0.75
VARS-223ENST00000474643 ADIRFQ15847 76 aa10.38□□□□□ -0.75
VARS-223ENST00000474643 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
VARS-223ENST00000474643 ZFP82Q8N141 532 aa10.38□□□□□ -0.75
VARS-223ENST00000474643 PRADC1Q9BSG0 188 aa10.38□□□□□ -0.75
VARS-223ENST00000474643 GFRA4Q9GZZ7 299 aa10.38□□□□□ -0.75
VARS-223ENST00000474643 RPP21Q9H633 154 aaKnown RBP10.38□□□□□ -0.75
VARS-223ENST00000474643 OR5AL1P0C617 328 aa10.37□□□□□ -0.75
VARS-223ENST00000474643 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
VARS-223ENST00000474643 FOXA3P55318 350 aaPredicted RBP10.37□□□□□ -0.75
VARS-223ENST00000474643 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
VARS-223ENST00000474643 NFE4Q86UQ8 179 aa10.37□□□□□ -0.75
VARS-223ENST00000474643 OR2D3Q8NGH3 330 aa10.37□□□□□ -0.75
VARS-223ENST00000474643 ANAPC16Q96DE5 110 aa10.37□□□□□ -0.75
VARS-223ENST00000474643 TPPP3Q9BW30 176 aa10.37□□□□□ -0.75
VARS-223ENST00000474643 SSBP4Q9BWG4 385 aaPredicted RBP10.37□□□□□ -0.75
VARS-223ENST00000474643 SCRT2Q9NQ03 307 aa10.37□□□□□ -0.75
VARS-223ENST00000474643 F2Z2F3 143 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 K7EQD1 137 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 GATCO43716 136 aaKnown RBP10.36□□□□□ -0.75
VARS-223ENST00000474643 MT-ND4LP03901 98 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 EVI2AP22794 236 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 SSTP61278 116 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 RHOHQ15669 191 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 SPANXN1Q5VSR9 72 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 WDR73Q6P4I2 378 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 OR10G8Q8NGN5 311 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 RNASE7Q9H1E1 156 aaKnown RBP10.36□□□□□ -0.75
VARS-223ENST00000474643 JPT2Q9H910 190 aa10.36□□□□□ -0.75
VARS-223ENST00000474643 LOC100131303A0A0U1RQF7 123 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 RHODO00212 210 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 LYPD5Q6UWN5 251 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 SLC7A5P1Q8MH63 180 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 SVBPQ8N300 66 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 SLC25A29Q8N8R3 303 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 TSKUQ8WUA8 353 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 CTDSP1Q9GZU7 261 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 TMEM242Q9NWH2 141 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 V9GYV3 84 aa10.35□□□□□ -0.75
VARS-223ENST00000474643 A0A087WWL8 130 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 MUC21A0A0G2JKD1 596 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 MUC21A0A140T8X8 626 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 TRBV6-4A0A1B0GX49 114 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 SNAI2O43623 268 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 GZMBP10144 247 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 RHEBQ15382 184 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 ZFP2Q6ZN57 461 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 SH2D6Q7Z4S9 175 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 OR10AG1Q8NH19 301 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 PCLOQ9Y6V0 5065 aa10.34□□□□□ -0.75
VARS-223ENST00000474643 A0A087WWC5 75 aa10.33□□□□□ -0.76
VARS-223ENST00000474643 SNAPINO95295 136 aa10.33□□□□□ -0.76
VARS-223ENST00000474643 IMMP2LQ96T52 175 aa10.33□□□□□ -0.76
VARS-223ENST00000474643 CNFNQ9BYD5 112 aa10.33□□□□□ -0.76
VARS-223ENST00000474643 SAMD10Q9BYL1 202 aa10.33□□□□□ -0.76
VARS-223ENST00000474643 FER1L6-AS1Q8NA97 138 aa10.32□□□□□ -0.76
VARS-223ENST00000474643 SMIM27A0A1W2PRY6 76 aa10.31□□□□□ -0.76
VARS-223ENST00000474643 K7EP13 123 aa10.31□□□□□ -0.76
VARS-223ENST00000474643 PSCAO43653 123 aa10.31□□□□□ -0.76
VARS-223ENST00000474643 SMIM17P0DL12 118 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms