RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 FOXI2Q6ZQN5 318 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 APRG1Q8IVJ8 170 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 TMEM86BQ8N661 226 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 TMEM158Q8WZ71 300 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 C18orf15Q96N68 181 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 FOXC2Q99958 501 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 TMEM208Q9BTX3 173 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 NF1P21359 2839 aa4.4□□□□□ -1.7
ATPAF1-204ENST00000474020 TRAV2A0A0B4J234 112 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 KLLNB2CW77 178 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 LINC01619G3V211 115 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 CD7P09564 240 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 ZNF688P0C7X2 276 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 HLA-DRB4P13762 266 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 TFPI2P48307 235 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 NMUP48645 174 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 SYNJ2BPP57105 145 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 VAMP3Q15836 100 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 TMEM95Q3KNT9 176 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 KHDC1LQ5JSQ8 128 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 C14orf178Q8N769 122 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 STPG4Q8N801 248 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 DYNLRB2Q8TF09 96 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 NRGNQ92686 78 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 FAM19A4Q96LR4 140 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 DUX5Q96PT3 197 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 SCGB3A1Q96QR1 104 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 KIR2DL4Q99706 377 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 HLA-DRB4X5D2U9 266 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 LRBAP50851 2863 aa4.4□□□□□ -1.71
ATPAF1-204ENST00000474020 ZFHX3Q15911 3703 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 IGHV1OR15-1A0A075B7D0 117 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 A0A096LNJ9 63 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 A0A096LNT2 108 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 TRAV12-1A0A0B4J245 112 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 F6UB75 175 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 H7C1H1 209 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 K7EQG2 157 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 CD5LO43866 347 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 NXPH4O95158 308 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 SRD5A1P18405 259 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 HOXD3P31249 432 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 CDKN1BP46527 198 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 HERVK_113P61574 105 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 RPL32P62910 135 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 MPV17L2Q567V2 206 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 BVES-AS1Q5T3Y7 98 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 PRR9Q5T870 116 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 RNF152Q8N8N0 203 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 NRACQ8N912 160 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 DCANP1Q8TF63 244 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 C4orf3Q8WVX3 66 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 ZNF702PQ9H963 129 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 CYSLTR1Q9Y271 337 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 ITPR2Q14571 2701 aa4.39□□□□□ -1.71
ATPAF1-204ENST00000474020 IGHV4OR15-8A0A075B7B6 117 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 A0A087WW49 117 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 A0A087WX48 190 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 TRAV26-2A0A0B4J265 109 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 TRAV12-3A0A0B4J271 114 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 A0A0J9YX75 114 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 VCYO14598 125 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 GATA1P15976 413 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 FXYD7P58549 80 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 GTF2H5Q6ZYL4 71 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 BOD1L2Q8IYS8 172 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 Q8N2B8 174 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 OR4C5Q8NGB2 326 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 TMEM141Q96I45 108 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 MCRIP2Q9BUT9 160 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 CSTL1Q9H114 145 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 TMEM160Q9NX00 188 aa4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 CHTOPQ9Y3Y2 248 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-204ENST00000474020 USP9YO00507 2555 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 BOD1L1Q8NFC6 3051 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 IGLV2-18A0A075B6J9 118 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 CBY3A6NI87 242 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 OR11H12B2RN74 326 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 F8VRH5 84 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 GNRH2O43555 120 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 CMC4P56277 68 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 UBE2V1Q13404 147 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 ZNF56Q15929 161 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 TAL2Q16559 108 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 TCTEX1D4Q5JR98 221 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 C2orf66Q6UXQ4 117 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 ERASQ7Z444 233 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 TRPT1Q86TN4 253 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 POM121L12Q8N7R1 296 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 MAPK1IP1LQ8NDC0 245 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 OR11H1Q8NG94 326 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 OR11H2Q8NH07 326 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 HIGD1BQ9P298 99 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 CENPEQ02224 2701 aa4.37□□□□□ -1.71
ATPAF1-204ENST00000474020 TRAV25A0A0B4J276 109 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 IGHV3-16A0A0C4DH30 117 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 IGKV3-20P01619 116 aa4.36□□□□□ -1.71
ATPAF1-204ENST00000474020 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 260 ms