RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 LGALS9BQ3B8N2 356 aa9.16□□□□□ -0.94
TPM3-216ENST00000473036 PTH2Q96A98 100 aa9.16□□□□□ -0.94
TPM3-216ENST00000473036 A0A1B0GW15 77 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 IGHV3-53P01767 116 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 S100A8P05109 93 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 CACNG7P62955 275 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 FER1L6-AS1Q8NA97 138 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 SYT8Q8NBV8 401 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 RASL10AQ92737 203 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 VSIG2Q96IQ7 327 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 FAM210BQ96KR6 192 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 C9orf85Q96MD7 179 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 SSBP4Q9BWG4 385 aaPredicted RBP9.15□□□□□ -0.94
TPM3-216ENST00000473036 PHLDA3Q9Y5J5 127 aa9.15□□□□□ -0.94
TPM3-216ENST00000473036 FHL2Q14192 279 aa9.14□□□□□ -0.95
TPM3-216ENST00000473036 ZNF479Q96JC4 524 aa9.14□□□□□ -0.95
TPM3-216ENST00000473036 SMCO4Q9NRQ5 59 aa9.14□□□□□ -0.95
TPM3-216ENST00000473036 TRGV2A0A075B6R0 118 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 TRAV26-1A0A087WT03 109 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 TMSB15BA0A087X1C1 80 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 A0A0J9YY99 117 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 SNAI2O43623 268 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 CIDEAO60543 219 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 ARMS2P0C7Q2 107 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 LINC00336Q6ZUF6 198 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 SMIM15Q7Z3B0 74 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 ZFP82Q8N141 532 aa9.13□□□□□ -0.95
TPM3-216ENST00000473036 GRIFINA4D1Z8 144 aa9.12□□□□□ -0.95
TPM3-216ENST00000473036 HIGD1CA8MV81 97 aa9.12□□□□□ -0.95
TPM3-216ENST00000473036 M0R2P5 195 aa9.12□□□□□ -0.95
TPM3-216ENST00000473036 IGLC6P0CF74 106 aa9.12□□□□□ -0.95
TPM3-216ENST00000473036 RIGQ13278 110 aa9.12□□□□□ -0.95
TPM3-216ENST00000473036 COX19Q49B96 90 aa9.12□□□□□ -0.95
TPM3-216ENST00000473036 SPANXN1Q5VSR9 72 aa9.12□□□□□ -0.95
TPM3-216ENST00000473036 ATP5L2Q7Z4Y8 100 aa9.12□□□□□ -0.95
TPM3-216ENST00000473036 SCRT2Q9NQ03 307 aa9.12□□□□□ -0.95
TPM3-216ENST00000473036 A0A1B0GUT8 65 aa9.11□□□□□ -0.95
TPM3-216ENST00000473036 CTRLP40313 264 aa9.11□□□□□ -0.95
TPM3-216ENST00000473036 RASL11AQ6T310 242 aa9.11□□□□□ -0.95
TPM3-216ENST00000473036 TPPP3Q9BW30 176 aa9.11□□□□□ -0.95
TPM3-216ENST00000473036 CNFNQ9BYD5 112 aa9.11□□□□□ -0.95
TPM3-216ENST00000473036 H3BVH4 76 aa9.1□□□□□ -0.95
TPM3-216ENST00000473036 NUDT3O95989 172 aa9.1□□□□□ -0.95
TPM3-216ENST00000473036 TRGC1P0CF51 173 aa9.1□□□□□ -0.95
TPM3-216ENST00000473036 LYZL1Q6UWQ5 148 aa9.1□□□□□ -0.95
TPM3-216ENST00000473036 NUP35Q8NFH5 326 aa9.1□□□□□ -0.95
TPM3-216ENST00000473036 A8MWV9 139 aa9.09□□□□□ -0.95
TPM3-216ENST00000473036 CRYBA4P53673 196 aa9.09□□□□□ -0.95
TPM3-216ENST00000473036 ZNF876PQ49A33 203 aa9.09□□□□□ -0.95
TPM3-216ENST00000473036 CFAP126Q5VTH2 177 aa9.09□□□□□ -0.95
TPM3-216ENST00000473036 C15orf53Q8NAA6 179 aa9.09□□□□□ -0.95
TPM3-216ENST00000473036 GTSF1Q8WW33 167 aa9.09□□□□□ -0.95
TPM3-216ENST00000473036 PGLYRP4Q96LB8 373 aa9.09□□□□□ -0.95
TPM3-216ENST00000473036 JPT2Q9H910 190 aa9.09□□□□□ -0.95
TPM3-216ENST00000473036 A0A096LPF7 62 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 TRAV4A0A0B4J268 109 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 RS1O15537 224 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 SMIM17P0DL12 118 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 P0DMU3 169 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 FAM231AP0DMU4 169 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 FAM231CP0DMU5 169 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 GZMBP10144 247 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 TWIST1Q15672 202 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 DMRTA1Q5VZB9 504 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 Q6ZSN1 163 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 FRZBQ92765 325 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 HHLA3Q9XRX5 114 aa9.08□□□□□ -0.96
TPM3-216ENST00000473036 LRP1BQ9NZR2 4599 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 TRBV24-1A0A075B6N3 115 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 H3BNG1 76 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 NXPH4O95158 308 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 NTF3P20783 257 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 HBBP68871 147 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 ESRGQ1W209 222 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 UFSP1Q6NVU6 142 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 OR4C5Q8NGB2 326 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 AP1S3Q96PC3 154 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 SAMD10Q9BYL1 202 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 LINC00588Q9Y4M8 146 aa9.07□□□□□ -0.96
TPM3-216ENST00000473036 IGHV3-73A0A0B4J1V6 119 aa9.06□□□□□ -0.96
TPM3-216ENST00000473036 LOC100131303A0A0U1RQF7 123 aa9.06□□□□□ -0.96
TPM3-216ENST00000473036 M0R381 172 aa9.06□□□□□ -0.96
TPM3-216ENST00000473036 RHODO00212 210 aa9.06□□□□□ -0.96
TPM3-216ENST00000473036 FAM3BP58499 235 aaPredicted RBP9.06□□□□□ -0.96
TPM3-216ENST00000473036 PRO0255Q9UI72 69 aa9.06□□□□□ -0.96
TPM3-216ENST00000473036 PAX4O43316 350 aa9.05□□□□□ -0.96
TPM3-216ENST00000473036 MT-ND6P03923 174 aa9.05□□□□□ -0.96
TPM3-216ENST00000473036 GATA1P15976 413 aaPredicted RBP9.05□□□□□ -0.96
TPM3-216ENST00000473036 SLAQ13239 276 aa9.05□□□□□ -0.96
TPM3-216ENST00000473036 ATRAIDQ6UW56 229 aa9.05□□□□□ -0.96
TPM3-216ENST00000473036 ZFP2Q6ZN57 461 aa9.05□□□□□ -0.96
TPM3-216ENST00000473036 OR10AG1Q8NH19 301 aa9.05□□□□□ -0.96
TPM3-216ENST00000473036 Q9UF83 564 aa9.05□□□□□ -0.96
TPM3-216ENST00000473036 URGCP-MRPS24S4R325 110 aa9.05□□□□□ -0.96
TPM3-216ENST00000473036 TRGV4A0A0C4DH28 118 aa9.04□□□□□ -0.96
TPM3-216ENST00000473036 MUC21A0A0G2JKD1 596 aa9.04□□□□□ -0.96
TPM3-216ENST00000473036 MUC21A0A140T8X8 626 aa9.04□□□□□ -0.96
TPM3-216ENST00000473036 ELOBQ15370 118 aa9.04□□□□□ -0.96
TPM3-216ENST00000473036 ZNRF2Q8NHG8 242 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms