RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 LINC01551Q86U37 167 aa13.63□□□□□ -0.23
HDAC7-220ENST00000471235 TPPP3Q9BW30 176 aa13.63□□□□□ -0.23
HDAC7-220ENST00000471235 MRPS16Q9Y3D3 137 aaKnown RBP13.63□□□□□ -0.23
HDAC7-220ENST00000471235 CRYGDP07320 174 aa13.62□□□□□ -0.23
HDAC7-220ENST00000471235 RAB14P61106 215 aa13.62□□□□□ -0.23
HDAC7-220ENST00000471235 FAM231DQ6ZW35 169 aa13.62□□□□□ -0.23
HDAC7-220ENST00000471235 NEGR1Q7Z3B1 354 aa13.62□□□□□ -0.23
HDAC7-220ENST00000471235 PRADC1Q9BSG0 188 aa13.62□□□□□ -0.23
HDAC7-220ENST00000471235 SMDT1Q9H4I9 107 aa13.62□□□□□ -0.23
HDAC7-220ENST00000471235 UPK3BQ9BT76 320 aa13.61□□□□□ -0.23
HDAC7-220ENST00000471235 M0R2N4 97 aa13.6□□□□□ -0.23
HDAC7-220ENST00000471235 GATCO43716 136 aaKnown RBP13.6□□□□□ -0.23
HDAC7-220ENST00000471235 FAM74A3Q4VXF1 159 aa13.6□□□□□ -0.23
HDAC7-220ENST00000471235 C14orf178Q8N769 122 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-220ENST00000471235 CTRLP40313 264 aa13.59□□□□□ -0.23
HDAC7-220ENST00000471235 SSTP61278 116 aa13.59□□□□□ -0.23
HDAC7-220ENST00000471235 CLLU1Q5K131 121 aa13.59□□□□□ -0.23
HDAC7-220ENST00000471235 LYPD5Q6UWN5 251 aa13.59□□□□□ -0.23
HDAC7-220ENST00000471235 A0A1W2PPQ1 181 aa13.58□□□□□ -0.24
HDAC7-220ENST00000471235 ERVFC1-1P60608 527 aa13.58□□□□□ -0.24
HDAC7-220ENST00000471235 CACNG7P62955 275 aa13.58□□□□□ -0.24
HDAC7-220ENST00000471235 LYZL1Q6UWQ5 148 aa13.58□□□□□ -0.24
HDAC7-220ENST00000471235 Q6ZR54 194 aa13.58□□□□□ -0.24
HDAC7-220ENST00000471235 AP1S3Q96PC3 154 aa13.58□□□□□ -0.24
HDAC7-220ENST00000471235 F2Z2F3 143 aa13.57□□□□□ -0.24
HDAC7-220ENST00000471235 LINC00694P0DN24 101 aa13.57□□□□□ -0.24
HDAC7-220ENST00000471235 RPL23P62829 140 aaKnown RBP13.57□□□□□ -0.24
HDAC7-220ENST00000471235 TMEM241Q24JQ0 296 aa13.57□□□□□ -0.24
HDAC7-220ENST00000471235 SH2D6Q7Z4S9 175 aa13.57□□□□□ -0.24
HDAC7-220ENST00000471235 MSRB1Q9NZV6 116 aa13.57□□□□□ -0.24
HDAC7-220ENST00000471235 NAT8Q9UHE5 227 aa13.57□□□□□ -0.24
HDAC7-220ENST00000471235 ZNF56Q15929 161 aa13.56□□□□□ -0.24
HDAC7-220ENST00000471235 CT83Q5H943 113 aa13.56□□□□□ -0.24
HDAC7-220ENST00000471235 GTSF1Q8WW33 167 aa13.56□□□□□ -0.24
HDAC7-220ENST00000471235 ISOC2Q96AB3 205 aa13.56□□□□□ -0.24
HDAC7-220ENST00000471235 OSTCQ9NRP0 149 aa13.56□□□□□ -0.24
HDAC7-220ENST00000471235 Q9UF83 564 aa13.56□□□□□ -0.24
HDAC7-220ENST00000471235 KIF25-AS1Q9Y6Z4 181 aa13.56□□□□□ -0.24
HDAC7-220ENST00000471235 FRAS1Q86XX4 4008 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 NBDYA0A0U1RRE5 68 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 GAGE12JA6NER3 117 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 GAGE1Q13065 139 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 GAGE4Q13068 117 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 GAGE5Q13069 117 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 GAGE13Q4V321 117 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 SOHLH1Q5JUK2 328 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 Q9H8V8 135 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 DNAH10Q8IVF4 4471 aa13.55□□□□□ -0.24
HDAC7-220ENST00000471235 A8MWL6 223 aa13.54□□□□□ -0.24
HDAC7-220ENST00000471235 ADIRFQ15847 76 aa13.54□□□□□ -0.24
HDAC7-220ENST00000471235 CNFNQ9BYD5 112 aa13.54□□□□□ -0.24
HDAC7-220ENST00000471235 TIRAPP58753 221 aa13.53□□□□□ -0.24
HDAC7-220ENST00000471235 RAB4BP61018 213 aa13.53□□□□□ -0.24
HDAC7-220ENST00000471235 WDR73Q6P4I2 378 aa13.53□□□□□ -0.24
HDAC7-220ENST00000471235 SMIM17P0DL12 118 aa13.52□□□□□ -0.25
HDAC7-220ENST00000471235 NTF3P20783 257 aa13.52□□□□□ -0.25
HDAC7-220ENST00000471235 LINC00315P59091 139 aa13.52□□□□□ -0.25
HDAC7-220ENST00000471235 C15orf54Q8N8G6 183 aa13.52□□□□□ -0.25
HDAC7-220ENST00000471235 ATP6V0E2Q8NHE4 81 aa13.52□□□□□ -0.25
HDAC7-220ENST00000471235 KRTAP1-5Q9BYS1 174 aa13.52□□□□□ -0.25
HDAC7-220ENST00000471235 V9GYV3 84 aa13.52□□□□□ -0.25
HDAC7-220ENST00000471235 TRBV10-1A0A0K0K1A3 114 aa13.51□□□□□ -0.25
HDAC7-220ENST00000471235 SIVA1O15304 175 aa13.51□□□□□ -0.25
HDAC7-220ENST00000471235 MGPP08493 103 aa13.51□□□□□ -0.25
HDAC7-220ENST00000471235 TRGC1P0CF51 173 aa13.51□□□□□ -0.25
HDAC7-220ENST00000471235 WFDC10BQ8IUB3 73 aa13.51□□□□□ -0.25
HDAC7-220ENST00000471235 EVI2AP22794 236 aa13.5□□□□□ -0.25
HDAC7-220ENST00000471235 TSKUQ8WUA8 353 aa13.5□□□□□ -0.25
HDAC7-220ENST00000471235 PGLYRP4Q96LB8 373 aa13.5□□□□□ -0.25
HDAC7-220ENST00000471235 F5H697 171 aa13.49□□□□□ -0.25
HDAC7-220ENST00000471235 TWIST1Q15672 202 aa13.49□□□□□ -0.25
HDAC7-220ENST00000471235 TTC32Q5I0X7 151 aa13.49□□□□□ -0.25
HDAC7-220ENST00000471235 OR10G8Q8NGN5 311 aa13.49□□□□□ -0.25
HDAC7-220ENST00000471235 GFRA4Q9GZZ7 299 aa13.49□□□□□ -0.25
HDAC7-220ENST00000471235 GTSF1LQ9H1H1 148 aa13.49□□□□□ -0.25
HDAC7-220ENST00000471235 DPH3P1Q9H4G8 78 aa13.49□□□□□ -0.25
HDAC7-220ENST00000471235 FOXA3P55318 350 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-220ENST00000471235 NEXN-AS1Q8NBZ9 246 aa13.48□□□□□ -0.25
HDAC7-220ENST00000471235 DNAH2Q9P225 4427 aa13.48□□□□□ -0.25
HDAC7-220ENST00000471235 HIGD1CA8MV81 97 aa13.47□□□□□ -0.25
HDAC7-220ENST00000471235 RTL8CO15255 209 aa13.47□□□□□ -0.25
HDAC7-220ENST00000471235 UBE2D3P61077 147 aa13.47□□□□□ -0.25
HDAC7-220ENST00000471235 UBE2D2P62837 147 aa13.47□□□□□ -0.25
HDAC7-220ENST00000471235 RPL36AP83881 106 aaKnown RBP13.47□□□□□ -0.25
HDAC7-220ENST00000471235 LELP1Q5T871 98 aa13.47□□□□□ -0.25
HDAC7-220ENST00000471235 SUMO4Q6EEV6 95 aa13.47□□□□□ -0.25
HDAC7-220ENST00000471235 RPL36ALQ969Q0 106 aaKnown RBP13.47□□□□□ -0.25
HDAC7-220ENST00000471235 FAM231BA6NCW3 169 aa13.46□□□□□ -0.25
HDAC7-220ENST00000471235 TRBV7-3A0A075B6L6 115 aa13.45□□□□□ -0.26
HDAC7-220ENST00000471235 OR10J3Q5JRS4 329 aa13.45□□□□□ -0.26
HDAC7-220ENST00000471235 C1orf134Q5TEV5 83 aa13.45□□□□□ -0.26
HDAC7-220ENST00000471235 TRAV8-6A0A0B4J262 113 aa13.44□□□□□ -0.26
HDAC7-220ENST00000471235 DNAH10OSP0CZ25 163 aa13.44□□□□□ -0.26
HDAC7-220ENST00000471235 C6orf223Q8N319 242 aa13.44□□□□□ -0.26
HDAC7-220ENST00000471235 BORCS7Q96B45 105 aa13.44□□□□□ -0.26
HDAC7-220ENST00000471235 DNAH17Q9UFH2 4485 aa13.44□□□□□ -0.26
HDAC7-220ENST00000471235 A0A1B0GUT8 65 aa13.43□□□□□ -0.26
HDAC7-220ENST00000471235 M0QY20 66 aa13.43□□□□□ -0.26
HDAC7-220ENST00000471235 UQCC3Q6UW78 93 aa13.43□□□□□ -0.26
HDAC7-220ENST00000471235 EPPK1P58107 5090 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms