RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 A0A087WWL8 130 aa10.39□□□□□ -0.75
ABCF3-208ENST00000471226 SIVA1O15304 175 aa10.39□□□□□ -0.75
ABCF3-208ENST00000471226 GZMBP10144 247 aa10.39□□□□□ -0.75
ABCF3-208ENST00000471226 TIRAPP58753 221 aa10.39□□□□□ -0.75
ABCF3-208ENST00000471226 FAM74A4Q5TZK3 123 aa10.39□□□□□ -0.75
ABCF3-208ENST00000471226 LINC00336Q6ZUF6 198 aa10.39□□□□□ -0.75
ABCF3-208ENST00000471226 A0A1W2PPQ1 181 aa10.38□□□□□ -0.75
ABCF3-208ENST00000471226 XKRY2A2RUG3 117 aa10.38□□□□□ -0.75
ABCF3-208ENST00000471226 LINC00694P0DN24 101 aa10.38□□□□□ -0.75
ABCF3-208ENST00000471226 C1orf134Q5TEV5 83 aa10.38□□□□□ -0.75
ABCF3-208ENST00000471226 SPANXN1Q5VSR9 72 aa10.38□□□□□ -0.75
ABCF3-208ENST00000471226 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
ABCF3-208ENST00000471226 FER1L6-AS1Q8NA97 138 aa10.38□□□□□ -0.75
ABCF3-208ENST00000471226 KRTAP1-5Q9BYS1 174 aa10.38□□□□□ -0.75
ABCF3-208ENST00000471226 LY96Q9Y6Y9 160 aa10.38□□□□□ -0.75
ABCF3-208ENST00000471226 MUC21A0A0G2JKD1 596 aa10.37□□□□□ -0.75
ABCF3-208ENST00000471226 MUC21A0A140T8X8 626 aa10.37□□□□□ -0.75
ABCF3-208ENST00000471226 CEBPGP53567 150 aa10.37□□□□□ -0.75
ABCF3-208ENST00000471226 TTC32Q5I0X7 151 aa10.37□□□□□ -0.75
ABCF3-208ENST00000471226 RNASE7Q9H1E1 156 aaKnown RBP10.37□□□□□ -0.75
ABCF3-208ENST00000471226 Q9UF83 564 aa10.37□□□□□ -0.75
ABCF3-208ENST00000471226 FAM231DQ6ZW35 169 aa10.36□□□□□ -0.75
ABCF3-208ENST00000471226 SMIM7Q9BQ49 75 aa10.36□□□□□ -0.75
ABCF3-208ENST00000471226 RPP21Q9H633 154 aaKnown RBP10.36□□□□□ -0.75
ABCF3-208ENST00000471226 GAGE12JA6NER3 117 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 F2Z2F3 143 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 CACNG7P62955 275 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 GAGE1Q13065 139 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 GAGE4Q13068 117 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 GAGE5Q13069 117 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 GAGE13Q4V321 117 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 SOHLH1Q5JUK2 328 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 WFDC10BQ8IUB3 73 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 C6orf223Q8N319 242 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 ATP6V0E2Q8NHE4 81 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 KIF25-AS1Q9Y6Z4 181 aa10.35□□□□□ -0.75
ABCF3-208ENST00000471226 PRSS29PA6NIE9 313 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 ZNF727A8MUV8 499 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 C9JQL5 133 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 BTF3P20290 206 aaKnown RBP10.34□□□□□ -0.75
ABCF3-208ENST00000471226 LINC00315P59091 139 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 RAB4BP61018 213 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 SSTP61278 116 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 LYZL1Q6UWQ5 148 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 LINC01551Q86U37 167 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 TPPP3Q9BW30 176 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 GTSF1LQ9H1H1 148 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 SMDT1Q9H4I9 107 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 MSRB1Q9NZV6 116 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 BIRC6Q9NR09 4857 aa10.34□□□□□ -0.75
ABCF3-208ENST00000471226 TRBV10-1A0A0K0K1A3 114 aa10.33□□□□□ -0.76
ABCF3-208ENST00000471226 GATCO43716 136 aaKnown RBP10.33□□□□□ -0.76
ABCF3-208ENST00000471226 DNAH10OSP0CZ25 163 aa10.33□□□□□ -0.76
ABCF3-208ENST00000471226 CTRLP40313 264 aa10.33□□□□□ -0.76
ABCF3-208ENST00000471226 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
ABCF3-208ENST00000471226 WDR73Q6P4I2 378 aa10.33□□□□□ -0.76
ABCF3-208ENST00000471226 AP1S3Q96PC3 154 aa10.33□□□□□ -0.76
ABCF3-208ENST00000471226 PKD1P98161 4303 aa10.33□□□□□ -0.76
ABCF3-208ENST00000471226 A0A1B0GVY2 172 aa10.32□□□□□ -0.76
ABCF3-208ENST00000471226 PEA15Q15121 130 aa10.32□□□□□ -0.76
ABCF3-208ENST00000471226 ZNF56Q15929 161 aa10.32□□□□□ -0.76
ABCF3-208ENST00000471226 FAM74A3Q4VXF1 159 aa10.32□□□□□ -0.76
ABCF3-208ENST00000471226 LELP1Q5T871 98 aa10.32□□□□□ -0.76
ABCF3-208ENST00000471226 GTSF1Q8WW33 167 aa10.32□□□□□ -0.76
ABCF3-208ENST00000471226 CNFNQ9BYD5 112 aa10.32□□□□□ -0.76
ABCF3-208ENST00000471226 K7EP13 123 aa10.31□□□□□ -0.76
ABCF3-208ENST00000471226 NTF3P20783 257 aa10.31□□□□□ -0.76
ABCF3-208ENST00000471226 ERVFC1-1P60608 527 aa10.31□□□□□ -0.76
ABCF3-208ENST00000471226 CT83Q5H943 113 aa10.31□□□□□ -0.76
ABCF3-208ENST00000471226 OR10G8Q8NGN5 311 aa10.31□□□□□ -0.76
ABCF3-208ENST00000471226 HECTD4Q9Y4D8 3996 aa10.31□□□□□ -0.76
ABCF3-208ENST00000471226 TRAV8-6A0A0B4J262 113 aa10.3□□□□□ -0.76
ABCF3-208ENST00000471226 A8MWL6 223 aa10.3□□□□□ -0.76
ABCF3-208ENST00000471226 SMIM17P0DL12 118 aa10.3□□□□□ -0.76
ABCF3-208ENST00000471226 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
ABCF3-208ENST00000471226 TMEM241Q24JQ0 296 aa10.3□□□□□ -0.76
ABCF3-208ENST00000471226 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
ABCF3-208ENST00000471226 OSTCQ9NRP0 149 aa10.3□□□□□ -0.76
ABCF3-208ENST00000471226 TRBV7-3A0A075B6L6 115 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 TRAV9-2A0A087WT02 112 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 IGHV3-38A0A0C4DH36 116 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 F5H697 171 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 TRGC1P0CF51 173 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 EVI2AP22794 236 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 FOXA3P55318 350 aaPredicted RBP10.29□□□□□ -0.76
ABCF3-208ENST00000471226 UBE2D3P61077 147 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 RPL23P62829 140 aaKnown RBP10.29□□□□□ -0.76
ABCF3-208ENST00000471226 UBE2D2P62837 147 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 OR10J3Q5JRS4 329 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
ABCF3-208ENST00000471226 A0A087WWC5 75 aa10.28□□□□□ -0.76
ABCF3-208ENST00000471226 TNP2Q05952 138 aa10.28□□□□□ -0.76
ABCF3-208ENST00000471226 LINC01556Q5JQF7 62 aa10.28□□□□□ -0.76
ABCF3-208ENST00000471226 ISOC2Q96AB3 205 aa10.28□□□□□ -0.76
ABCF3-208ENST00000471226 KRTAP17-1Q9BYP8 105 aa10.28□□□□□ -0.76
ABCF3-208ENST00000471226 NAT8Q9UHE5 227 aa10.28□□□□□ -0.76
ABCF3-208ENST00000471226 DNAH11Q96DT5 4516 aa10.28□□□□□ -0.76
ABCF3-208ENST00000471226 RAB14P61106 215 aa10.27□□□□□ -0.77
ABCF3-208ENST00000471226 DPH3P1Q9H4G8 78 aa10.27□□□□□ -0.77
ABCF3-208ENST00000471226 FAM231BA6NCW3 169 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms