RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
BRAT1-203ENST00000467558 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
BRAT1-203ENST00000467558 MYCNOSP40205 109 aa10.55□□□□□ -0.72
BRAT1-203ENST00000467558 TMEM61Q8N0U2 210 aa10.55□□□□□ -0.72
BRAT1-203ENST00000467558 Q8N6K4 173 aa10.55□□□□□ -0.72
BRAT1-203ENST00000467558 MLST8Q9BVC4 326 aa10.55□□□□□ -0.72
BRAT1-203ENST00000467558 C11orf68Q9H3H3 251 aaKnown RBP10.55□□□□□ -0.72
BRAT1-203ENST00000467558 CLPSL1A2RUU4 121 aa10.55□□□□□ -0.72
BRAT1-203ENST00000467558 SLC25A20O43772 301 aa10.55□□□□□ -0.72
BRAT1-203ENST00000467558 DNAJC9-AS1A6NH13 148 aa10.54□□□□□ -0.72
BRAT1-203ENST00000467558 WFDC11Q8NEX6 87 aa10.54□□□□□ -0.72
BRAT1-203ENST00000467558 DKK2Q9UBU2 259 aa10.54□□□□□ -0.72
BRAT1-203ENST00000467558 ABCA12Q86UK0 2595 aa10.54□□□□□ -0.72
BRAT1-203ENST00000467558 LRRK2Q5S007 2527 aa10.54□□□□□ -0.72
BRAT1-203ENST00000467558 A0A0J9YX75 114 aa10.54□□□□□ -0.72
BRAT1-203ENST00000467558 DEFB1P60022 68 aa10.54□□□□□ -0.72
BRAT1-203ENST00000467558 Q8N1Y9 231 aa10.54□□□□□ -0.72
BRAT1-203ENST00000467558 NACAE9PAV3 2078 aa10.53□□□□□ -0.72
BRAT1-203ENST00000467558 FRMD6-AS1P0C7T7 363 aa10.53□□□□□ -0.72
BRAT1-203ENST00000467558 VPS13AQ96RL7 3174 aa10.53□□□□□ -0.72
BRAT1-203ENST00000467558 PRSS29PA6NIE9 313 aa10.53□□□□□ -0.72
BRAT1-203ENST00000467558 S100A7L2Q5SY68 101 aa10.53□□□□□ -0.72
BRAT1-203ENST00000467558 CITED2Q99967 270 aaPredicted RBP10.53□□□□□ -0.72
BRAT1-203ENST00000467558 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
BRAT1-203ENST00000467558 SUMO4Q6EEV6 95 aa10.53□□□□□ -0.72
BRAT1-203ENST00000467558 RPL39LQ96EH5 51 aaKnown RBP10.53□□□□□ -0.72
BRAT1-203ENST00000467558 GAGE6Q13070 117 aa10.52□□□□□ -0.72
BRAT1-203ENST00000467558 SORL1Q92673 2214 aa10.52□□□□□ -0.72
BRAT1-203ENST00000467558 ADAMTSL5Q6ZMM2 481 aa10.52□□□□□ -0.73
BRAT1-203ENST00000467558 UBE2DNLQ8IWF7 75 aa10.52□□□□□ -0.73
BRAT1-203ENST00000467558 PRRC2AP48634 2157 aaKnown RBP10.52□□□□□ -0.73
BRAT1-203ENST00000467558 LEPROTO15243 131 aa10.52□□□□□ -0.73
BRAT1-203ENST00000467558 UBE2V1Q13404 147 aa10.52□□□□□ -0.73
BRAT1-203ENST00000467558 JPT2Q9H910 190 aa10.52□□□□□ -0.73
BRAT1-203ENST00000467558 LINC00322Q6ZN03 302 aaPredicted RBP10.51□□□□□ -0.73
BRAT1-203ENST00000467558 ZNF625Q96I27 306 aaPredicted RBP10.51□□□□□ -0.73
BRAT1-203ENST00000467558 ZFAND3Q9H8U3 227 aa10.51□□□□□ -0.73
BRAT1-203ENST00000467558 COX11Q9Y6N1 276 aa10.51□□□□□ -0.73
BRAT1-203ENST00000467558 SCGB1A1P11684 91 aa10.51□□□□□ -0.73
BRAT1-203ENST00000467558 ATXN8Q156A1 80 aa10.51□□□□□ -0.73
BRAT1-203ENST00000467558 DLX4Q92988 240 aaPredicted RBP10.51□□□□□ -0.73
BRAT1-203ENST00000467558 C16orf74Q96GX8 76 aa10.51□□□□□ -0.73
BRAT1-203ENST00000467558 DNAJC30Q96LL9 226 aa10.51□□□□□ -0.73
BRAT1-203ENST00000467558 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
BRAT1-203ENST00000467558 SETD2Q9BYW2 2564 aaPredicted RBP10.5□□□□□ -0.73
BRAT1-203ENST00000467558 JMJD1CQ15652 2540 aa10.5□□□□□ -0.73
BRAT1-203ENST00000467558 TRAV8-2A0A0B4J237 113 aa10.5□□□□□ -0.73
BRAT1-203ENST00000467558 A0A1B0GXF2 115 aa10.5□□□□□ -0.73
BRAT1-203ENST00000467558 VWC2LB2RUY7 222 aa10.5□□□□□ -0.73
BRAT1-203ENST00000467558 EYSQ5T1H1 3165 aa10.5□□□□□ -0.73
BRAT1-203ENST00000467558 J3QQQ9 107 aa10.5□□□□□ -0.73
BRAT1-203ENST00000467558 LGALS9O00182 355 aa10.5□□□□□ -0.73
BRAT1-203ENST00000467558 ZNF80P51504 273 aaPredicted RBP10.5□□□□□ -0.73
BRAT1-203ENST00000467558 HERVK_113P63121 156 aa10.5□□□□□ -0.73
BRAT1-203ENST00000467558 TTC32Q5I0X7 151 aa10.49□□□□□ -0.73
BRAT1-203ENST00000467558 TANC2Q9HCD6 1990 aa10.49□□□□□ -0.73
BRAT1-203ENST00000467558 KIR2DL5BA0A0G2JN68 375 aa10.49□□□□□ -0.73
BRAT1-203ENST00000467558 KIR2DL5BA0A0G2JPC4 375 aa10.49□□□□□ -0.73
BRAT1-203ENST00000467558 SIVA1O15304 175 aa10.49□□□□□ -0.73
BRAT1-203ENST00000467558 KIR2DL5AQ8N109 375 aa10.49□□□□□ -0.73
BRAT1-203ENST00000467558 MAJINQ3KP22 176 aa10.49□□□□□ -0.73
BRAT1-203ENST00000467558 CDPF1Q6NVV7 123 aa10.49□□□□□ -0.73
BRAT1-203ENST00000467558 LINC01545Q5VT33 79 aa10.49□□□□□ -0.73
BRAT1-203ENST00000467558 MBD6Q96DN6 1003 aa10.48□□□□□ -0.73
BRAT1-203ENST00000467558 SPANXA1Q9NS26 97 aa10.48□□□□□ -0.73
BRAT1-203ENST00000467558 LINC00173Q6ZV60 143 aa10.48□□□□□ -0.73
BRAT1-203ENST00000467558 TAL2Q16559 108 aa10.48□□□□□ -0.73
BRAT1-203ENST00000467558 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
BRAT1-203ENST00000467558 K7EQG2 157 aa10.47□□□□□ -0.73
BRAT1-203ENST00000467558 PIFOQ8TCI5 191 aa10.46□□□□□ -0.73
BRAT1-203ENST00000467558 ZNF462Q96JM2 2506 aa10.46□□□□□ -0.74
BRAT1-203ENST00000467558 INSL3P51460 131 aa10.46□□□□□ -0.74
BRAT1-203ENST00000467558 RNASE13Q5GAN3 156 aaKnown RBP10.46□□□□□ -0.74
BRAT1-203ENST00000467558 CST9LQ9H4G1 147 aa10.46□□□□□ -0.74
BRAT1-203ENST00000467558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.46□□□□□ -0.74
BRAT1-203ENST00000467558 IGKV2-29A2NJV5 120 aaPredicted RBP10.46□□□□□ -0.74
BRAT1-203ENST00000467558 BVES-AS1Q5T3Y7 98 aa10.46□□□□□ -0.74
BRAT1-203ENST00000467558 ODF3Q96PU9 254 aa10.46□□□□□ -0.74
BRAT1-203ENST00000467558 ADAMTS20P59510 1910 aa10.45□□□□□ -0.74
BRAT1-203ENST00000467558 GATD1Q8NB37 220 aa10.45□□□□□ -0.74
BRAT1-203ENST00000467558 A0A1W2PPR1 153 aa10.45□□□□□ -0.74
BRAT1-203ENST00000467558 IGLC6P0CF74 106 aa10.45□□□□□ -0.74
BRAT1-203ENST00000467558 MAP6D1Q9H9H5 199 aa10.45□□□□□ -0.74
BRAT1-203ENST00000467558 MDFICQ9P1T7 246 aa10.45□□□□□ -0.74
BRAT1-203ENST00000467558 A0A096LPF7 62 aa10.45□□□□□ -0.74
BRAT1-203ENST00000467558 ANGP03950 147 aaKnown RBP10.44□□□□□ -0.74
BRAT1-203ENST00000467558 DAZ2Q13117 558 aaKnown RBP10.44□□□□□ -0.74
BRAT1-203ENST00000467558 Q6ZSV7 163 aa10.44□□□□□ -0.74
BRAT1-203ENST00000467558 DAZ4Q86SG3 579 aaKnown RBP10.44□□□□□ -0.74
BRAT1-203ENST00000467558 DAZ3Q9NR90 486 aaKnown RBP10.44□□□□□ -0.74
BRAT1-203ENST00000467558 SMAD5-AS1Q9Y6J3 95 aa10.44□□□□□ -0.74
BRAT1-203ENST00000467558 C9orf118A6NHY6 69 aa10.44□□□□□ -0.74
BRAT1-203ENST00000467558 ZNF561-AS1K7EIQ3 104 aa10.44□□□□□ -0.74
BRAT1-203ENST00000467558 K7EQD1 137 aa10.44□□□□□ -0.74
BRAT1-203ENST00000467558 PSMB8P28062 276 aa10.44□□□□□ -0.74
BRAT1-203ENST00000467558 PSCAO43653 123 aa10.43□□□□□ -0.74
BRAT1-203ENST00000467558 TSPAN13O95857 204 aa10.43□□□□□ -0.74
BRAT1-203ENST00000467558 PCP2Q8IVA1 136 aa10.43□□□□□ -0.74
BRAT1-203ENST00000467558 PFN2P35080 140 aa10.43□□□□□ -0.74
BRAT1-203ENST00000467558 PSMG3-AS1Q96PY0 264 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms