RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 C19orf71A6NCJ1 209 aa10.02□□□□□ -0.81
HMGXB4-206ENST00000466438 RPL19P84098 196 aaKnown RBP10.02□□□□□ -0.81
HMGXB4-206ENST00000466438 NUDT10Q8NFP7 164 aa10.02□□□□□ -0.81
HMGXB4-206ENST00000466438 NUDT11Q96G61 164 aa10.02□□□□□ -0.81
HMGXB4-206ENST00000466438 IL36BQ9NZH7 164 aa10.02□□□□□ -0.81
HMGXB4-206ENST00000466438 V9GYV3 84 aa10.02□□□□□ -0.81
HMGXB4-206ENST00000466438 FABP5P3A8MUU1 101 aa10.01□□□□□ -0.81
HMGXB4-206ENST00000466438 PFN1P07737 140 aaKnown RBP10.01□□□□□ -0.81
HMGXB4-206ENST00000466438 CRISP2P16562 243 aa10.01□□□□□ -0.81
HMGXB4-206ENST00000466438 TNFRSF18Q9Y5U5 241 aa10.01□□□□□ -0.81
HMGXB4-206ENST00000466438 TRAV9-1A0A075B6T8 112 aa10□□□□□ -0.81
HMGXB4-206ENST00000466438 IGLV5-52A0A0A0MRZ9 124 aa10□□□□□ -0.81
HMGXB4-206ENST00000466438 A8MWL6 223 aa10□□□□□ -0.81
HMGXB4-206ENST00000466438 SIVA1O15304 175 aa10□□□□□ -0.81
HMGXB4-206ENST00000466438 SH2D1AO60880 128 aa10□□□□□ -0.81
HMGXB4-206ENST00000466438 GPX1P07203 203 aa10□□□□□ -0.81
HMGXB4-206ENST00000466438 RPS20P60866 119 aaKnown RBP10□□□□□ -0.81
HMGXB4-206ENST00000466438 FAM19A4Q96LR4 140 aa10□□□□□ -0.81
HMGXB4-206ENST00000466438 LRP2P98164 4655 aa10□□□□□ -0.81
HMGXB4-206ENST00000466438 TRAV21A0A0B4J279 112 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 A0A0J9YY99 117 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 TMEM238LA0A1B0GVL6 79 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 H3BNG1 76 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 INSP01308 110 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 OR2D3Q8NGH3 330 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 TSKUQ8WUA8 353 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 GFRA4Q9GZZ7 299 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 URGCP-MRPS24S4R325 110 aa9.99□□□□□ -0.81
HMGXB4-206ENST00000466438 DNAH8Q96JB1 4490 aa9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 FAM231BA6NCW3 169 aa9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 A8MTW9 85 aa9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 AZU1P20160 251 aa9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 CDKN1BP46527 198 aa9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 ELOBQ15370 118 aa9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 Q6AWC8 147 aa9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 AMTNQ6UX39 209 aa9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 ZFAND2AQ8N6M9 145 aa9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.98□□□□□ -0.81
HMGXB4-206ENST00000466438 SMIM27A0A1W2PRY6 76 aa9.97□□□□□ -0.81
HMGXB4-206ENST00000466438 KLLNB2CW77 178 aa9.97□□□□□ -0.81
HMGXB4-206ENST00000466438 CRIP1P50238 77 aa9.97□□□□□ -0.81
HMGXB4-206ENST00000466438 NTN5Q8WTR8 489 aaPredicted RBP9.97□□□□□ -0.81
HMGXB4-206ENST00000466438 NAT8BQ9UHF3 227 aa9.97□□□□□ -0.81
HMGXB4-206ENST00000466438 TIMM8BQ9Y5J9 83 aaPredicted RBP9.97□□□□□ -0.81
HMGXB4-206ENST00000466438 TRBV24-1A0A075B6N3 115 aa9.96□□□□□ -0.82
HMGXB4-206ENST00000466438 C7orf71A4D174 169 aa9.96□□□□□ -0.82
HMGXB4-206ENST00000466438 J3KRW8 73 aa9.96□□□□□ -0.82
HMGXB4-206ENST00000466438 CRXO43186 299 aaPredicted RBP9.96□□□□□ -0.82
HMGXB4-206ENST00000466438 ORM1P02763 201 aa9.96□□□□□ -0.82
HMGXB4-206ENST00000466438 ZNF80P51504 273 aaPredicted RBP9.96□□□□□ -0.82
HMGXB4-206ENST00000466438 CXCL1P09341 107 aa9.95□□□□□ -0.82
HMGXB4-206ENST00000466438 HOXA5P20719 270 aa9.95□□□□□ -0.82
HMGXB4-206ENST00000466438 RNASE4P34096 147 aaKnown RBP9.95□□□□□ -0.82
HMGXB4-206ENST00000466438 BORCS7Q96B45 105 aa9.95□□□□□ -0.82
HMGXB4-206ENST00000466438 C16orf74Q96GX8 76 aa9.95□□□□□ -0.82
HMGXB4-206ENST00000466438 YPEL4Q96NS1 127 aa9.95□□□□□ -0.82
HMGXB4-206ENST00000466438 COLCA2A8K830 154 aa9.94□□□□□ -0.82
HMGXB4-206ENST00000466438 HIGD1CA8MV81 97 aa9.94□□□□□ -0.82
HMGXB4-206ENST00000466438 M0R2Z0 102 aa9.94□□□□□ -0.82
HMGXB4-206ENST00000466438 TCL1AP56279 114 aa9.94□□□□□ -0.82
HMGXB4-206ENST00000466438 SPINK13Q1W4C9 94 aa9.94□□□□□ -0.82
HMGXB4-206ENST00000466438 PRR9Q5T870 116 aa9.94□□□□□ -0.82
HMGXB4-206ENST00000466438 KCNS1Q96KK3 526 aa9.94□□□□□ -0.82
HMGXB4-206ENST00000466438 C20orf144Q9BQM9 153 aa9.94□□□□□ -0.82
HMGXB4-206ENST00000466438 NOP10Q9NPE3 64 aaKnown RBP9.94□□□□□ -0.82
HMGXB4-206ENST00000466438 TGIF2-C20orf24A0A0A6YYL0 155 aa9.93□□□□□ -0.82
HMGXB4-206ENST00000466438 NXPH4O95158 308 aa9.93□□□□□ -0.82
HMGXB4-206ENST00000466438 COX19Q49B96 90 aa9.93□□□□□ -0.82
HMGXB4-206ENST00000466438 GFI1BQ5VTD9 330 aa9.93□□□□□ -0.82
HMGXB4-206ENST00000466438 FAM159AQ6UWV7 190 aa9.93□□□□□ -0.82
HMGXB4-206ENST00000466438 ATP5L2Q7Z4Y8 100 aa9.93□□□□□ -0.82
HMGXB4-206ENST00000466438 PYGO2Q9BRQ0 406 aa9.93□□□□□ -0.82
HMGXB4-206ENST00000466438 NAGKQ9UJ70 344 aa9.93□□□□□ -0.82
HMGXB4-206ENST00000466438 PKHD1L1Q86WI1 4243 aa9.93□□□□□ -0.82
HMGXB4-206ENST00000466438 TMSB15BA0A087X1C1 80 aa9.92□□□□□ -0.82
HMGXB4-206ENST00000466438 A0A096LPF7 62 aa9.92□□□□□ -0.82
HMGXB4-206ENST00000466438 TYMSP04818 313 aa9.92□□□□□ -0.82
HMGXB4-206ENST00000466438 RAB5AP20339 215 aa9.92□□□□□ -0.82
HMGXB4-206ENST00000466438 KRTAP10-4P60372 401 aaPredicted RBP9.92□□□□□ -0.82
HMGXB4-206ENST00000466438 RASL11AQ6T310 242 aa9.92□□□□□ -0.82
HMGXB4-206ENST00000466438 LINC00612Q8N6U2 182 aa9.92□□□□□ -0.82
HMGXB4-206ENST00000466438 TRAV12-3A0A0B4J271 114 aa9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 S100A8P05109 93 aa9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 LORP23490 312 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 FOXA3P55318 350 aaPredicted RBP9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 WDR73Q6P4I2 378 aa9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 Q6ZSA8 131 aa9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 TMEM256Q8N2U0 113 aa9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 FER1L6-AS1Q8NA97 138 aa9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 NUP35Q8NFH5 326 aa9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 LINC01587Q99440 93 aa9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 MSRB1Q9NZV6 116 aa9.91□□□□□ -0.82
HMGXB4-206ENST00000466438 TRAV12-2A0A075B6T6 113 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 TRAV9-2A0A087WT02 112 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 IGKV3D-20A0A0C4DH25 116 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 A0A1B0GW15 77 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 F2Z2F3 143 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 GZMBP10144 247 aa9.9□□□□□ -0.82
HMGXB4-206ENST00000466438 ASIPP42127 132 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms