RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RBMY1A1P0DJD3 496 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 RBMY1CP0DJD4 496 aa12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 RBMY1FQ15415 496 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 ANXA2RQ3ZCQ2 193 aa12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 FA2HQ7L5A8 372 aa12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 PRSS3P2Q8NHM4 247 aa12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 TRAV12-3A0A0B4J271 114 aa12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 H3BVH4 76 aa12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 BTF3P20290 206 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 SPANXN1Q5VSR9 72 aa12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 PRKDCP78527 4128 aaKnown RBP12.29□□□□□ -0.44
EXOSC3-203ENST00000465229 LEPROTL1O95214 131 aa12.28□□□□□ -0.44
EXOSC3-203ENST00000465229 INSP01308 110 aa12.28□□□□□ -0.44
EXOSC3-203ENST00000465229 TDRG1Q3Y452 100 aa12.28□□□□□ -0.44
EXOSC3-203ENST00000465229 SBSPONQ8IVN8 264 aa12.28□□□□□ -0.44
EXOSC3-203ENST00000465229 C1orf158Q8N1D5 194 aa12.28□□□□□ -0.44
EXOSC3-203ENST00000465229 S100A4P26447 101 aaKnown RBP12.27□□□□□ -0.44
EXOSC3-203ENST00000465229 DDTP30046 118 aa12.27□□□□□ -0.44
EXOSC3-203ENST00000465229 PRO1933Q9H354 126 aa12.27□□□□□ -0.44
EXOSC3-203ENST00000465229 HSPB8Q9UJY1 196 aa12.27□□□□□ -0.44
EXOSC3-203ENST00000465229 LINC01546A6NGU7 62 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 NXPH4O95158 308 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 NPYP01303 97 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 IFI27P40305 119 aaPredicted RBP12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 PMCHL1Q16048 86 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 DEFB135Q30KP9 77 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 FAM159AQ6UWV7 190 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 TMEM70Q9BUB7 260 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 EVI2AP22794 236 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 C20orf144Q9BQM9 153 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 VAMP8Q9BV40 100 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 MAP1LC3AQ9H492 121 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
EXOSC3-203ENST00000465229 DNAH9Q9NYC9 4486 aa12.25□□□□□ -0.45
EXOSC3-203ENST00000465229 PRSS47A8MTI9 375 aa12.25□□□□□ -0.45
EXOSC3-203ENST00000465229 RNASE3P12724 160 aaKnown RBP12.25□□□□□ -0.45
EXOSC3-203ENST00000465229 ZNF705AQ6ZN79 300 aaPredicted RBP12.25□□□□□ -0.45
EXOSC3-203ENST00000465229 RNF183Q96D59 192 aa12.25□□□□□ -0.45
EXOSC3-203ENST00000465229 MRAP2Q96G30 205 aa12.25□□□□□ -0.45
EXOSC3-203ENST00000465229 FBN3Q75N90 2809 aa12.24□□□□□ -0.45
EXOSC3-203ENST00000465229 IGHV3OR16-12A0A075B7B8 117 aa12.24□□□□□ -0.45
EXOSC3-203ENST00000465229 SMKR1H3BMG3 65 aa12.24□□□□□ -0.45
EXOSC3-203ENST00000465229 TNFRSF6BO95407 300 aa12.24□□□□□ -0.45
EXOSC3-203ENST00000465229 LINC01587Q99440 93 aa12.24□□□□□ -0.45
EXOSC3-203ENST00000465229 NXT2Q9NPJ8 142 aaKnown RBP12.24□□□□□ -0.45
EXOSC3-203ENST00000465229 GOLT1BQ9Y3E0 138 aa12.24□□□□□ -0.45
EXOSC3-203ENST00000465229 TENM3Q9P273 2699 aa12.23□□□□□ -0.45
EXOSC3-203ENST00000465229 GNRH2O43555 120 aa12.23□□□□□ -0.45
EXOSC3-203ENST00000465229 NCR2O95944 276 aa12.23□□□□□ -0.45
EXOSC3-203ENST00000465229 PRM2P04554 102 aa12.23□□□□□ -0.45
EXOSC3-203ENST00000465229 TMEM208Q9BTX3 173 aa12.23□□□□□ -0.45
EXOSC3-203ENST00000465229 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 SYS1-DBNDD2H3BUS1 97 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 SPRY2O43597 315 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 PET117Q6UWS5 81 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 B9D2Q9BPU9 175 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 OVOL2Q9BRP0 275 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 MAP1LC3CQ9BXW4 147 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 SPATA12Q7Z6I5 190 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 TM2D3Q9BRN9 247 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 RETNQ9HD89 108 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 TP53TG1Q9Y2A0 90 aa12.22□□□□□ -0.45
EXOSC3-203ENST00000465229 HUWE1Q7Z6Z7 4374 aaKnown RBP12.21□□□□□ -0.45
EXOSC3-203ENST00000465229 IGHV1OR15-1A0A075B7D0 117 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 C20orf202A1L168 122 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 M0R381 172 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 HTN1P15515 57 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 POM121L12Q8N7R1 296 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 NRACQ8N912 160 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 OR11H2Q8NH07 326 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 AP1S3Q96PC3 154 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 NDUFAF3Q9BU61 184 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 X6R8D5 127 aa12.21□□□□□ -0.46
EXOSC3-203ENST00000465229 A0A096LNJ9 63 aa12.2□□□□□ -0.46
EXOSC3-203ENST00000465229 HBDP02042 147 aa12.2□□□□□ -0.46
EXOSC3-203ENST00000465229 Q8N8P6 123 aa12.2□□□□□ -0.46
EXOSC3-203ENST00000465229 LINC00467Q9BRT7 94 aa12.2□□□□□ -0.46
EXOSC3-203ENST00000465229 TIMM8BQ9Y5J9 83 aaPredicted RBP12.2□□□□□ -0.46
EXOSC3-203ENST00000465229 LINC00173Q6ZV60 143 aa12.19□□□□□ -0.46
EXOSC3-203ENST00000465229 C9orf85Q96MD7 179 aa12.19□□□□□ -0.46
EXOSC3-203ENST00000465229 IGLV2-18A0A075B6J9 118 aa12.19□□□□□ -0.46
EXOSC3-203ENST00000465229 IGHV3-16A0A0C4DH30 117 aa12.19□□□□□ -0.46
EXOSC3-203ENST00000465229 GAS8-AS1O95177 125 aa12.19□□□□□ -0.46
EXOSC3-203ENST00000465229 AZU1P20160 251 aa12.19□□□□□ -0.46
EXOSC3-203ENST00000465229 SPATA25Q9BR10 227 aa12.19□□□□□ -0.46
EXOSC3-203ENST00000465229 PAM16Q9Y3D7 125 aa12.19□□□□□ -0.46
EXOSC3-203ENST00000465229 MUC4Q99102 2169 aa12.18□□□□□ -0.46
EXOSC3-203ENST00000465229 PPP1R17O96001 155 aa12.18□□□□□ -0.46
EXOSC3-203ENST00000465229 CTAG1AP78358 180 aa12.18□□□□□ -0.46
EXOSC3-203ENST00000465229 COL7A1Q02388 2944 aa12.18□□□□□ -0.46
EXOSC3-203ENST00000465229 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
EXOSC3-203ENST00000465229 SMIM9A6NGZ8 99 aa12.17□□□□□ -0.46
EXOSC3-203ENST00000465229 CBY3A6NI87 242 aa12.17□□□□□ -0.46
EXOSC3-203ENST00000465229 GATA1P15976 413 aaPredicted RBP12.17□□□□□ -0.46
EXOSC3-203ENST00000465229 RRN3P1Q2M238 152 aa12.17□□□□□ -0.46
EXOSC3-203ENST00000465229 C14orf144Q96I85 54 aa12.17□□□□□ -0.46
EXOSC3-203ENST00000465229 C20orf78Q9BR46 151 aa12.17□□□□□ -0.46
EXOSC3-203ENST00000465229 MIEN1Q9BRT3 115 aa12.17□□□□□ -0.46
EXOSC3-203ENST00000465229 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 479.2 ms