RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 MOB4Q9Y3A3 225 aa5.46□□□□□ -1.53
USP48-206ENST00000464577 WDFY4Q6ZS81 3184 aa5.46□□□□□ -1.54
USP48-206ENST00000464577 H3BUA1 57 aa5.46□□□□□ -1.54
USP48-206ENST00000464577 NPFFO15130 113 aa5.46□□□□□ -1.54
USP48-206ENST00000464577 UNQ9165/PRO28630Q6UXU0 137 aa5.46□□□□□ -1.54
USP48-206ENST00000464577 RP1L1Q8IWN7 2480 aaPredicted RBP5.45□□□□□ -1.54
USP48-206ENST00000464577 M0R2P5 195 aa5.45□□□□□ -1.54
USP48-206ENST00000464577 TGFAP01135 160 aa5.45□□□□□ -1.54
USP48-206ENST00000464577 LINC01620Q4KN68 170 aa5.45□□□□□ -1.54
USP48-206ENST00000464577 XP32Q5T750 250 aa5.45□□□□□ -1.54
USP48-206ENST00000464577 FAM159AQ6UWV7 190 aa5.45□□□□□ -1.54
USP48-206ENST00000464577 MDFICQ9P1T7 246 aa5.45□□□□□ -1.54
USP48-206ENST00000464577 OTOGLQ3ZCN5 2332 aa5.45□□□□□ -1.54
USP48-206ENST00000464577 ARHGAP32A7KAX9 2087 aa5.45□□□□□ -1.54
USP48-206ENST00000464577 TRBV30A0A0K0K1B3 111 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 F6UB75 175 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 SNCGO76070 127 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 ZNF22P17026 224 aaPredicted RBP5.44□□□□□ -1.54
USP48-206ENST00000464577 GATA3P23771 443 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 DEFB1P60022 68 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 GAGE2BQ13066 116 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 GAGE2EQ4V326 116 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 RAX2Q96IS3 184 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 USMG5Q96IX5 58 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 C9orf85Q96MD7 179 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 GAGE2DQ9UEU5 116 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 TRAV2A0A0B4J234 112 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 TRBV10-2A0A0K0K1G8 114 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 F5H697 171 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 NHLRC4P0CG21 123 aaPredicted RBP5.44□□□□□ -1.54
USP48-206ENST00000464577 TRPT1Q86TN4 253 aaKnown RBP5.44□□□□□ -1.54
USP48-206ENST00000464577 MUSTN1Q8IVN3 82 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 Q8N1Y9 231 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 ODF3Q96PU9 254 aa5.44□□□□□ -1.54
USP48-206ENST00000464577 ZNF318Q5VUA4 2279 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 A0A087WWL8 130 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 TRBV12-3P01733 135 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 NDUFV3P56181 108 aaKnown RBP5.43□□□□□ -1.54
USP48-206ENST00000464577 MRPL23Q16540 153 aaKnown RBP5.43□□□□□ -1.54
USP48-206ENST00000464577 NTN5Q8WTR8 489 aaPredicted RBP5.43□□□□□ -1.54
USP48-206ENST00000464577 JPT2Q9H910 190 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 ZFHX4Q86UP3 3567 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 CFAP47Q6ZTR5 3102 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 APC2O95996 2303 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 TRAV8-4A0A0B4J246 113 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 IGHV3-16A0A0C4DH30 117 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 J3QL48 77 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 M0QY20 66 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 CCL21O00585 134 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 ID1P41134 155 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 Q1RN00 199 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 C20orf203Q8NBC4 194 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 RHPN1-AS1Q9BWJ2 59 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 SPANXA1Q9NS26 97 aa5.43□□□□□ -1.54
USP48-206ENST00000464577 SMG1Q96Q15 3661 aaKnown RBP5.42□□□□□ -1.54
USP48-206ENST00000464577 A0A0J9YXY3 114 aa5.42□□□□□ -1.54
USP48-206ENST00000464577 LMO4P61968 165 aa5.42□□□□□ -1.54
USP48-206ENST00000464577 RPL11P62913 178 aaKnown RBP5.42□□□□□ -1.54
USP48-206ENST00000464577 TCF15Q12870 199 aa5.42□□□□□ -1.54
USP48-206ENST00000464577 TMEM219Q86XT9 240 aa5.42□□□□□ -1.54
USP48-206ENST00000464577 SS18L2Q9UHA2 77 aa5.42□□□□□ -1.54
USP48-206ENST00000464577 ZNF256Q9Y2P7 627 aaPredicted RBP5.42□□□□□ -1.54
USP48-206ENST00000464577 MUC4Q99102 2169 aa5.42□□□□□ -1.54
USP48-206ENST00000464577 POLEQ07864 2286 aa5.42□□□□□ -1.54
USP48-206ENST00000464577 IGLV4-3A0A075B6K6 122 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 TRAV4A0A0B4J268 109 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 H3BMM0 161 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 H3BT86 120 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 I3L3M4 83 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 K7EMT4 169 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 TRIAP1O43715 76 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 PF4P02776 101 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 IFITM1P13164 125 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 ADORA2A-AS1P86434 159 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 CDSNQ15517 529 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 ZNF56Q15929 161 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 UBE2WQ96B02 151 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 LITAFQ99732 161 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 SPANXDQ9BXN6 97 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 EDA2RQ9HAV5 297 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 DAZ1Q9NQZ3 744 aaKnown RBP5.41□□□□□ -1.54
USP48-206ENST00000464577 SPANXCQ9NY87 97 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 PYGO1Q9Y3Y4 419 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 PCNX1Q96RV3 2341 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 A0A0J9YXV3 536 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 FAM240AA0A1B0GVK7 77 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 GAGE12JA6NER3 117 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
USP48-206ENST00000464577 H7C2G1 150 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 K7ENP7 123 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 GAGE7O76087 117 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 ELANEP08246 267 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 GAGE12FP0CL80 117 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 GAGE12GP0CL81 117 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 GAGE12IP0CL82 117 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 GAGE4Q13068 117 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 OPRPNQ99935 248 aaPredicted RBP5.41□□□□□ -1.54
USP48-206ENST00000464577 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 LINC00527Q9UJ94 153 aa5.41□□□□□ -1.54
USP48-206ENST00000464577 BDP1A6H8Y1 2624 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms