RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 UBE2E1P51965 193 aa7.62□□□□□ -1.19
UFD1-205ENST00000459854 LINC00205P59089 165 aa7.62□□□□□ -1.19
UFD1-205ENST00000459854 MRPS36P82909 103 aaKnown RBP7.61□□□□□ -1.19
UFD1-205ENST00000459854 PIP4P2Q8N4L2 257 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 YPEL4Q96NS1 127 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 A0A1B0GXF2 115 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 ZFYVE26Q68DK2 2539 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 ZNF503-AS2A6NEH8 195 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 LINC01619G3V211 115 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 NREPQ16612 68 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 ZNRF2Q8NHG8 242 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 C11orf1Q9H5F2 150 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 LYPD6Q86Y78 171 aa7.61□□□□□ -1.19
UFD1-205ENST00000459854 PCNX3Q9H6A9 2034 aa7.6□□□□□ -1.19
UFD1-205ENST00000459854 CRYGCP07315 174 aa7.6□□□□□ -1.19
UFD1-205ENST00000459854 BAALCQ8WXS3 180 aa7.6□□□□□ -1.19
UFD1-205ENST00000459854 DOCK7Q96N67 2140 aa7.6□□□□□ -1.19
UFD1-205ENST00000459854 GATA3P23771 443 aa7.6□□□□□ -1.19
UFD1-205ENST00000459854 RMI2Q96E14 147 aa7.6□□□□□ -1.19
UFD1-205ENST00000459854 ANKHD1Q8IWZ3 2542 aaKnown RBP7.6□□□□□ -1.19
UFD1-205ENST00000459854 OVOL3O00110 214 aa7.6□□□□□ -1.19
UFD1-205ENST00000459854 TCL1BO95988 128 aa7.6□□□□□ -1.19
UFD1-205ENST00000459854 PHF3Q92576 2039 aaKnown RBP7.59□□□□□ -1.19
UFD1-205ENST00000459854 BPTFQ12830 3046 aa7.59□□□□□ -1.19
UFD1-205ENST00000459854 C19orf84I3L1E1 186 aa7.59□□□□□ -1.19
UFD1-205ENST00000459854 C10orf105Q8TEF2 133 aa7.59□□□□□ -1.19
UFD1-205ENST00000459854 C19orf71A6NCJ1 209 aa7.59□□□□□ -1.19
UFD1-205ENST00000459854 IGHV3-53P01767 116 aa7.59□□□□□ -1.19
UFD1-205ENST00000459854 DAD1P61803 113 aa7.59□□□□□ -1.19
UFD1-205ENST00000459854 AGPAT4-IT1Q9H0P7 198 aa7.59□□□□□ -1.19
UFD1-205ENST00000459854 IGLV3-9A0A075B6K5 115 aa7.59□□□□□ -1.19
UFD1-205ENST00000459854 KAAG1Q9UBP8 84 aa7.59□□□□□ -1.19
UFD1-205ENST00000459854 HEATR1Q9H583 2144 aaKnown RBP7.58□□□□□ -1.2
UFD1-205ENST00000459854 A0A0J9YXY3 114 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 DEFB131AP59861 70 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 TMEM61Q8N0U2 210 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 SERP2Q8N6R1 65 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 ZNF462Q96JM2 2506 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 IGHV7-4-1A0A0J9YVY3 117 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 COX7A2LO14548 114 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 MED12LQ86YW9 2145 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 B4DSR2 109 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 ATP6V0E1O15342 81 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 MIAQ16674 131 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 FAM167A-AS1Q96KT0 104 aa7.58□□□□□ -1.2
UFD1-205ENST00000459854 ROS1P08922 2347 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 IGHV1-58A0A0C4DH39 117 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 NDUFB1O75438 58 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 IGLC6P0CF74 106 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 DAZ2Q13117 558 aaKnown RBP7.57□□□□□ -1.2
UFD1-205ENST00000459854 C16orf54Q6UWD8 224 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 DAZ4Q86SG3 579 aaKnown RBP7.57□□□□□ -1.2
UFD1-205ENST00000459854 DAZ3Q9NR90 486 aaKnown RBP7.57□□□□□ -1.2
UFD1-205ENST00000459854 TRAV4A0A0B4J268 109 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 SPINK13Q1W4C9 94 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 TRBV30A0A0K0K1B3 111 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 CHKB-CPT1BH3BT56 60 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 H3BUX3 64 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 NXPH4O95158 308 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 FOXE3Q13461 319 aa7.57□□□□□ -1.2
UFD1-205ENST00000459854 RSPO1Q2MKA7 263 aaPredicted RBP7.57□□□□□ -1.2
UFD1-205ENST00000459854 TRBV12-3P01733 135 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 UBE2BP63146 152 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 DEFB104AQ8WTQ1 72 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 ABCA4P78363 2273 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 RS1O15537 224 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 COX7CP15954 63 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 KRTAP27-1Q3LI81 207 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 WDR86Q86TI4 376 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 COX7B2Q8TF08 81 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 MDFICQ9P1T7 246 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 PKDREJQ9NTG1 2253 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 KLHL30-AS1Q8NEE0 82 aa7.56□□□□□ -1.2
UFD1-205ENST00000459854 ICE1Q9Y2F5 2266 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 A0A0J9YXV3 536 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 C1orf195Q5TG92 126 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 TP73-AS1Q9UF72 201 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 U3KQE9 123 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 BUB3O43684 328 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 DEFB113Q30KQ7 82 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 LYPD2Q6UXB3 125 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 C9orf47Q6ZRZ4 202 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 UPK3BQ9BT76 320 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 KLK9Q9UKQ9 250 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 LOXP28300 417 aaPredicted RBP7.55□□□□□ -1.2
UFD1-205ENST00000459854 SAA4P35542 130 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 HIGD2BQ4VC39 106 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 HIST2H2BCQ6DN03 193 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 HIST2H2BDQ6DRA6 164 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 FAM110AQ9BQ89 295 aa7.55□□□□□ -1.2
UFD1-205ENST00000459854 LYNX1G3V0Z9 82 aa7.54□□□□□ -1.2
UFD1-205ENST00000459854 PROP1O75360 226 aa7.54□□□□□ -1.2
UFD1-205ENST00000459854 LYNX1P0DP58 116 aa7.54□□□□□ -1.2
UFD1-205ENST00000459854 FREM1Q5H8C1 2179 aa7.54□□□□□ -1.2
UFD1-205ENST00000459854 MYO18BQ8IUG5 2567 aa7.54□□□□□ -1.2
UFD1-205ENST00000459854 SMIM26A0A096LP01 95 aa7.54□□□□□ -1.2
UFD1-205ENST00000459854 CDSNQ15517 529 aa7.54□□□□□ -1.2
UFD1-205ENST00000459854 RPL18AQ02543 176 aaKnown RBP7.54□□□□□ -1.2
UFD1-205ENST00000459854 PATE2Q6UY27 113 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms