RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 A0A0D9SG52 128 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 PGPA6NDG6 321 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 GCGP01275 180 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 CRPP02741 224 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 RPL19P84098 196 aaKnown RBP3.66□□□□□ -1.82
VPS8-214ENST00000458721 MIAQ16674 131 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 LINC01620Q4KN68 170 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 SMUG1Q53HV7 270 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 SAPCD1Q5SSQ6 148 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 UFSP1Q6NVU6 142 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 TMEM75Q8N9X5 138 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 TVP23CQ96ET8 276 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 RNF185Q96GF1 192 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 SEC22CQ9BRL7 303 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 CCDC32Q9BV29 185 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 MBD2Q9UBB5 411 aa3.66□□□□□ -1.82
VPS8-214ENST00000458721 TRAV6A0A075B6T7 132 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 A0A1W2PPV4 95 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 GAGE12JA6NER3 117 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 PGPEP1LA6NFU8 196 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 PLA2G10O15496 165 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 TCRAP04437 139 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 S100A4P26447 101 aaKnown RBP3.65□□□□□ -1.83
VPS8-214ENST00000458721 ASIPP42127 132 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 FLI1Q01543 452 aaPredicted RBP3.65□□□□□ -1.83
VPS8-214ENST00000458721 GAGE1Q13065 139 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 GAGE4Q13068 117 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 GAGE5Q13069 117 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 CIRBPQ14011 172 aaKnown RBP3.65□□□□□ -1.83
VPS8-214ENST00000458721 DNLZQ5SXM8 178 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 C9orf163Q8N9P6 203 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.65□□□□□ -1.83
VPS8-214ENST00000458721 SCGB1C1Q8TD33 95 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 UBE2WQ96B02 151 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 DAZAP1Q96EP5 407 aaKnown RBP3.65□□□□□ -1.83
VPS8-214ENST00000458721 KLK12Q9UKR0 248 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 HSPB11Q9Y547 144 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 PKHD1L1Q86WI1 4243 aa3.65□□□□□ -1.83
VPS8-214ENST00000458721 IGHV3-73A0A0B4J1V6 119 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 CNBPP62633 177 aaKnown RBP3.64□□□□□ -1.83
VPS8-214ENST00000458721 RPL36AP83881 106 aaKnown RBP3.64□□□□□ -1.83
VPS8-214ENST00000458721 TMEM97Q5BJF2 176 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 MZT2BQ6NZ67 158 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 LINC00299Q6ZSB3 139 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 OR10G8Q8NGN5 311 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 OR2G3Q8NGZ4 309 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 SUN5Q8TC36 379 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 RPL36ALQ969Q0 106 aaKnown RBP3.64□□□□□ -1.83
VPS8-214ENST00000458721 RAB24Q969Q5 203 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 ZC2HC1AQ96GY0 325 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 TMEM167BQ9NRX6 74 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 PSG8Q9UQ74 426 aa3.64□□□□□ -1.83
VPS8-214ENST00000458721 TRBV7-3A0A075B6L6 115 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 TRBV6-8A0A0A6YYG3 113 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 FAM240BA0A1B0GVZ2 78 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 FABP5P3A8MUU1 101 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 USP17L23D6RBM5 183 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 MBP02144 154 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 STAG3L2P0CL84 134 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 STAG3L3P0CL85 134 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 ARL14EPLP0DKL9 152 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 CDC34P49427 236 aaPredicted RBP3.63□□□□□ -1.83
VPS8-214ENST00000458721 ZNF80P51504 273 aaPredicted RBP3.63□□□□□ -1.83
VPS8-214ENST00000458721 HNRNPA3P51991 378 aaKnown RBP3.63□□□□□ -1.83
VPS8-214ENST00000458721 UBE2D3P61077 147 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 UBE2D2P62837 147 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 LGALSLQ3ZCW2 172 aaPredicted RBP3.63□□□□□ -1.83
VPS8-214ENST00000458721 LRRC37A5PQ49AS3 106 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 COX8CQ7Z4L0 72 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 OR11H4Q8NGC9 324 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 OR2T35Q8NGX2 323 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 PPP1R1CQ8WVI7 109 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 NKX6-2Q9C056 277 aaPredicted RBP3.63□□□□□ -1.83
VPS8-214ENST00000458721 PRR34Q9NV39 138 aa3.63□□□□□ -1.83
VPS8-214ENST00000458721 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.62□□□□□ -1.83
VPS8-214ENST00000458721 IGKV3D-20A0A0C4DH25 116 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 A0A1W2PRE2 83 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 B4DEV8 164 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 H0YIZ8 118 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 MPC2O95563 127 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 HLA-DQA1P01909 254 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 GZMBP10144 247 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 RPL12P30050 165 aaKnown RBP3.62□□□□□ -1.83
VPS8-214ENST00000458721 RAB2AP61019 212 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 GNG5P63218 68 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 SERF2P84101 59 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 FAM74A4Q5TZK3 123 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 ENHOQ6UWT2 76 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 ZFP82Q8N141 532 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 C14orf178Q8N769 122 aaPredicted RBP3.62□□□□□ -1.83
VPS8-214ENST00000458721 SFRP2Q96HF1 295 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 TCEAL7Q9BRU2 100 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 PSMG3Q9BT73 122 aaPredicted RBP3.62□□□□□ -1.83
VPS8-214ENST00000458721 SAMD10Q9BYL1 202 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 EPDR1Q9UM22 224 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 PHLDA3Q9Y5J5 127 aa3.62□□□□□ -1.83
VPS8-214ENST00000458721 IGHV3-64A0A075B6Q5 118 aa3.61□□□□□ -1.83
VPS8-214ENST00000458721 H3BVH4 76 aa3.61□□□□□ -1.83
VPS8-214ENST00000458721 CXorf1O96002 111 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms