RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ZNF418Q8TF45 676 aaPredicted RBP2.5□□□□□ -2.01
HMGN1P18-201ENST00000457642 C9orf85Q96MD7 179 aa2.5□□□□□ -2.01
HMGN1P18-201ENST00000457642 SPAG8Q99932 426 aaPredicted RBP2.5□□□□□ -2.01
HMGN1P18-201ENST00000457642 TIMM21Q9BVV7 248 aa2.5□□□□□ -2.01
HMGN1P18-201ENST00000457642 MDFICQ9P1T7 246 aa2.5□□□□□ -2.01
HMGN1P18-201ENST00000457642 ERG28Q9UKR5 140 aa2.5□□□□□ -2.01
HMGN1P18-201ENST00000457642 TNFRSF18Q9Y5U5 241 aa2.5□□□□□ -2.01
HMGN1P18-201ENST00000457642 KIF25-AS1Q9Y6Z4 181 aa2.5□□□□□ -2.01
HMGN1P18-201ENST00000457642 WDFY3Q8IZQ1 3526 aa2.5□□□□□ -2.01
HMGN1P18-201ENST00000457642 VPS13AQ96RL7 3174 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 CFAP54Q96N23 3096 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 TRAV2A0A0B4J234 112 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 IGHV4-61A0A0C4DH41 118 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 A0A1W2PPR1 153 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 TMEM223A0PJW6 202 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 RNF223E7ERA6 249 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 K7EQG2 157 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 IGHV3-30P01768 117 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 ELANEP08246 267 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 ZNF688P0C7X2 276 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 CFC1BP0CG36 223 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 CFC1P0CG37 223 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 P0DMU3 169 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 FAM231AP0DMU4 169 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 FAM231CP0DMU5 169 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 IGHV3-30-5P0DP03 117 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 SRD5A1P18405 259 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 EMP1P54849 157 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 CKS1BP61024 79 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 RPL39P62891 51 aaKnown RBP2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 CFHR3Q02985 330 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 PIK3CD-AS1Q5SR53 167 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 Q6ZQT7 251 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 RNF152Q8N8N0 203 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 LINC01356Q8N9X3 169 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 C20orf203Q8NBC4 194 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 KLHL30-AS1Q8NEE0 82 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 DCANP1Q8TF63 244 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 RAX2Q96IS3 184 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 DUX5Q96PT3 197 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 EDA2RQ9HAV5 297 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 SPANXA1Q9NS26 97 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 PEMTQ9UBM1 199 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 PRO0461Q9UI25 63 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 PYGO1Q9Y3Y4 419 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 TLN1Q9Y490 2541 aaKnown RBP2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 FRYLO94915 3013 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 FREM2Q5SZK8 3169 aa2.49□□□□□ -2.01
HMGN1P18-201ENST00000457642 AGRNO00468 2067 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 A4D1N5 150 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 C9JAW5 83 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 M0QY20 66 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 SPRY2O43597 315 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 SLC25A20O43772 301 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 SNCGO76070 127 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 TCL1BO95988 128 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 TSHBP01222 138 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 IGKV3-20P01619 116 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 CRYGDP07320 174 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 SPINK8P0C7L1 97 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 IFITM1P13164 125 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 ZNF22P17026 224 aaPredicted RBP2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 GNLYP22749 145 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 PSMB8P28062 276 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 RPL13AP40429 203 aaKnown RBP2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 SYNJ2BPP57105 145 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 LINC00315P59091 139 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 DEFB1P60022 68 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 BLCAPP62952 87 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 CIRBPQ14011 172 aaKnown RBP2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 LY6DQ14210 128 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 SPINK13Q1W4C9 94 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 Q5PR19 223 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 SFTA2Q6UW10 78 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 Q8N1Y9 231 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 ANKRD29Q8N6D5 301 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 DYNLRB2Q8TF09 96 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 PTH2Q96A98 100 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 DNAJC30Q96LL9 226 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 DUX3Q96PT4 197 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 SPXQ9BT56 116 aa2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 GEMIN7Q9H840 131 aaKnown RBP2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 ZFHX2Q9C0A1 2572 aaPredicted RBP2.48□□□□□ -2.01
HMGN1P18-201ENST00000457642 MUC6Q6W4X9 2439 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 DSPP15924 2871 aaKnown RBP2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 IGLV4-3A0A075B6K6 122 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 TRAV12-2A0A075B6T6 113 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 IGHV4-30-2A0A087WSY4 118 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 TRAV8-4A0A0B4J246 113 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 IGHV1-58A0A0C4DH39 117 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 A0A0J9YXV3 536 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 A0A0J9YXY3 114 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 TRBV30A0A0K0K1B3 111 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 TRBV10-2A0A0K0K1G8 114 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 TINCRA0A1B0GVN0 87 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 H3BMM0 161 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 H3BT86 120 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 H7C2G1 150 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 C19orf84I3L1E1 186 aa2.47□□□□□ -2.01
HMGN1P18-201ENST00000457642 TIMM17BO60830 172 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms