RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 LINC01559Q495D7 138 aa7.95□□□□□ -1.14
PDGFB-204ENST00000455790 STOML3Q8TAV4 291 aa7.95□□□□□ -1.14
PDGFB-204ENST00000455790 SFT2D1Q8WV19 159 aa7.95□□□□□ -1.14
PDGFB-204ENST00000455790 IGLV5-52A0A0A0MRZ9 124 aa7.94□□□□□ -1.14
PDGFB-204ENST00000455790 RHODO00212 210 aa7.94□□□□□ -1.14
PDGFB-204ENST00000455790 RPL19P84098 196 aaKnown RBP7.94□□□□□ -1.14
PDGFB-204ENST00000455790 LAGE3Q14657 143 aa7.94□□□□□ -1.14
PDGFB-204ENST00000455790 DAZ4Q86SG3 579 aaKnown RBP7.94□□□□□ -1.14
PDGFB-204ENST00000455790 Q8N814 137 aa7.94□□□□□ -1.14
PDGFB-204ENST00000455790 SYT8Q8NBV8 401 aa7.94□□□□□ -1.14
PDGFB-204ENST00000455790 SFRP2Q96HF1 295 aa7.94□□□□□ -1.14
PDGFB-204ENST00000455790 TCEAL7Q9BRU2 100 aa7.94□□□□□ -1.14
PDGFB-204ENST00000455790 DAZ3Q9NR90 486 aaKnown RBP7.94□□□□□ -1.14
PDGFB-204ENST00000455790 PHLDA3Q9Y5J5 127 aa7.94□□□□□ -1.14
PDGFB-204ENST00000455790 BCL2L11O43521 198 aa7.93□□□□□ -1.14
PDGFB-204ENST00000455790 SEC11BP0C7V7 166 aa7.93□□□□□ -1.14
PDGFB-204ENST00000455790 TPT1P13693 172 aaKnown RBP7.93□□□□□ -1.14
PDGFB-204ENST00000455790 Q5VSD8 79 aa7.93□□□□□ -1.14
PDGFB-204ENST00000455790 MBD3L1Q8WWY6 194 aa7.93□□□□□ -1.14
PDGFB-204ENST00000455790 DNAJC30Q96LL9 226 aa7.93□□□□□ -1.14
PDGFB-204ENST00000455790 ZNF471Q9BX82 626 aaPredicted RBP7.93□□□□□ -1.14
PDGFB-204ENST00000455790 HERC1Q15751 4861 aa7.92□□□□□ -1.14
PDGFB-204ENST00000455790 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
PDGFB-204ENST00000455790 HMSDA8MTL9 139 aa7.92□□□□□ -1.14
PDGFB-204ENST00000455790 LECT2O14960 151 aa7.92□□□□□ -1.14
PDGFB-204ENST00000455790 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
PDGFB-204ENST00000455790 ZFP82Q8N141 532 aa7.92□□□□□ -1.14
PDGFB-204ENST00000455790 NTN5Q8WTR8 489 aaPredicted RBP7.92□□□□□ -1.14
PDGFB-204ENST00000455790 SRRM2Q9UQ35 2752 aaKnown RBP7.91□□□□□ -1.14
PDGFB-204ENST00000455790 UMAD1C9J7I0 102 aa7.91□□□□□ -1.14
PDGFB-204ENST00000455790 NIT1Q86X76 327 aa7.91□□□□□ -1.14
PDGFB-204ENST00000455790 OR10AG1Q8NH19 301 aa7.91□□□□□ -1.14
PDGFB-204ENST00000455790 MLST8Q9BVC4 326 aa7.91□□□□□ -1.14
PDGFB-204ENST00000455790 FAM30AQ9NZY2 134 aa7.91□□□□□ -1.14
PDGFB-204ENST00000455790 BOLA1Q9Y3E2 137 aa7.91□□□□□ -1.14
PDGFB-204ENST00000455790 DNAH8Q96JB1 4490 aa7.91□□□□□ -1.14
PDGFB-204ENST00000455790 A0A087WWC5 75 aa7.9□□□□□ -1.14
PDGFB-204ENST00000455790 A0A0D9SG52 128 aa7.9□□□□□ -1.14
PDGFB-204ENST00000455790 MUC21A0A0G2JKD1 596 aa7.9□□□□□ -1.14
PDGFB-204ENST00000455790 MUC21A0A140T8X8 626 aa7.9□□□□□ -1.14
PDGFB-204ENST00000455790 KANTRA0A1W2PQU2 76 aa7.9□□□□□ -1.14
PDGFB-204ENST00000455790 PFDN1O60925 122 aa7.9□□□□□ -1.14
PDGFB-204ENST00000455790 BAGE2Q86Y30 109 aa7.9□□□□□ -1.14
PDGFB-204ENST00000455790 DERL1Q9BUN8 251 aa7.9□□□□□ -1.14
PDGFB-204ENST00000455790 TRAV8-3A0A0A6YYJ7 113 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 H2AFB1P0C5Y9 115 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 UBE2D3P61077 147 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 UBE2D2P62837 147 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 CCL20P78556 96 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 PRR27Q6MZM9 219 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 TMUB2Q71RG4 321 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 FRZBQ92765 325 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 TMEM70Q9BUB7 260 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 TM2D2Q9BX73 214 aa7.89□□□□□ -1.15
PDGFB-204ENST00000455790 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.88□□□□□ -1.15
PDGFB-204ENST00000455790 TRBV10-1A0A0K0K1A3 114 aa7.88□□□□□ -1.15
PDGFB-204ENST00000455790 S100A9P06702 114 aaKnown RBP7.88□□□□□ -1.15
PDGFB-204ENST00000455790 INAFM2P0DMQ5 153 aa7.88□□□□□ -1.15
PDGFB-204ENST00000455790 ZNF56Q15929 161 aa7.88□□□□□ -1.15
PDGFB-204ENST00000455790 BAALCQ8WXS3 180 aa7.88□□□□□ -1.15
PDGFB-204ENST00000455790 KLK12Q9UKR0 248 aa7.88□□□□□ -1.15
PDGFB-204ENST00000455790 TRBV7-3A0A075B6L6 115 aa7.87□□□□□ -1.15
PDGFB-204ENST00000455790 SNAI2O43623 268 aa7.87□□□□□ -1.15
PDGFB-204ENST00000455790 CXCL1P09341 107 aa7.87□□□□□ -1.15
PDGFB-204ENST00000455790 RPL35P42766 123 aaKnown RBP7.87□□□□□ -1.15
PDGFB-204ENST00000455790 SSTP61278 116 aa7.87□□□□□ -1.15
PDGFB-204ENST00000455790 RPL36AP83881 106 aaKnown RBP7.87□□□□□ -1.15
PDGFB-204ENST00000455790 NEXN-AS1Q8NBZ9 246 aa7.87□□□□□ -1.15
PDGFB-204ENST00000455790 RPL36ALQ969Q0 106 aaKnown RBP7.87□□□□□ -1.15
PDGFB-204ENST00000455790 C11orf52Q96A22 123 aa7.87□□□□□ -1.15
PDGFB-204ENST00000455790 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
PDGFB-204ENST00000455790 GNG13Q9P2W3 67 aa7.87□□□□□ -1.15
PDGFB-204ENST00000455790 DMBT1Q9UGM3 2413 aaPredicted RBP7.86□□□□□ -1.15
PDGFB-204ENST00000455790 IGKV2D-24A0A075B6R9 120 aa7.86□□□□□ -1.15
PDGFB-204ENST00000455790 OR5AL1P0C617 328 aa7.86□□□□□ -1.15
PDGFB-204ENST00000455790 RAB4BP61018 213 aa7.86□□□□□ -1.15
PDGFB-204ENST00000455790 LINC01620Q4KN68 170 aa7.86□□□□□ -1.15
PDGFB-204ENST00000455790 TOR2AQ5JU69 321 aa7.86□□□□□ -1.15
PDGFB-204ENST00000455790 OR10G8Q8NGN5 311 aa7.86□□□□□ -1.15
PDGFB-204ENST00000455790 UBE2WQ96B02 151 aa7.86□□□□□ -1.15
PDGFB-204ENST00000455790 URGCP-MRPS24S4R325 110 aa7.86□□□□□ -1.15
PDGFB-204ENST00000455790 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
PDGFB-204ENST00000455790 GZMBP10144 247 aa7.85□□□□□ -1.15
PDGFB-204ENST00000455790 EIF5AP63241 154 aaKnown RBP7.85□□□□□ -1.15
PDGFB-204ENST00000455790 CENPWQ5EE01 88 aa7.85□□□□□ -1.15
PDGFB-204ENST00000455790 SPANXN1Q5VSR9 72 aa7.85□□□□□ -1.15
PDGFB-204ENST00000455790 MANBALQ9NQG1 85 aa7.85□□□□□ -1.15
PDGFB-204ENST00000455790 A0A087WX48 190 aa7.84□□□□□ -1.15
PDGFB-204ENST00000455790 TRBV6-8A0A0A6YYG3 113 aa7.84□□□□□ -1.15
PDGFB-204ENST00000455790 TRAV1-1A0A0B4J248 108 aa7.84□□□□□ -1.15
PDGFB-204ENST00000455790 RBFOX3A6NFN3 312 aa7.84□□□□□ -1.15
PDGFB-204ENST00000455790 IGLV2-8P01709 118 aa7.84□□□□□ -1.15
PDGFB-204ENST00000455790 MPV17L2Q567V2 206 aa7.84□□□□□ -1.15
PDGFB-204ENST00000455790 Q6ZSA8 131 aa7.84□□□□□ -1.15
PDGFB-204ENST00000455790 KIF25-AS1Q9Y6Z4 181 aa7.84□□□□□ -1.15
PDGFB-204ENST00000455790 RAB19A4D1S5 217 aa7.83□□□□□ -1.16
PDGFB-204ENST00000455790 C1QBP02746 253 aa7.83□□□□□ -1.16
PDGFB-204ENST00000455790 ATRAIDQ6UW56 229 aa7.83□□□□□ -1.16
PDGFB-204ENST00000455790 RMI2Q96E14 147 aa7.83□□□□□ -1.16
PDGFB-204ENST00000455790 CHCHD7Q9BUK0 85 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms