RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SUMO2P61956 95 aaKnown RBP5□□□□□ -1.61
ECHDC1-210ENST00000454859 PDZD11Q5EBL8 140 aa5□□□□□ -1.61
ECHDC1-210ENST00000454859 URB1-AS1Q96HZ7 61 aa5□□□□□ -1.61
ECHDC1-210ENST00000454859 LINC01587Q99440 93 aa5□□□□□ -1.61
ECHDC1-210ENST00000454859 TMEM70Q9BUB7 260 aa5□□□□□ -1.61
ECHDC1-210ENST00000454859 MUC4Q99102 2169 aa5□□□□□ -1.61
ECHDC1-210ENST00000454859 AGRNO00468 2067 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 IGLV2-18A0A075B6J9 118 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 A8MZ25 164 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 VCYO14598 125 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 NPYP01303 97 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 APOC4P55056 127 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 LAGE3Q14657 143 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 ZNF705AQ6ZN79 300 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 Q6ZWC4 215 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 C11orf72Q8NBR9 251 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 C18orf15Q96N68 181 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 OVOL2Q9BRP0 275 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 SMIM2Q9BVW6 85 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 NIT2Q9NQR4 276 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 C2CD3Q4AC94 2353 aa4.99□□□□□ -1.61
ECHDC1-210ENST00000454859 TRAV12-2A0A075B6T6 113 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 J3KRW8 73 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 IGKV3-20P01619 116 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 PKIAP61925 76 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 ZNF876PQ49A33 203 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 TEX43Q6ZNM6 134 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 ST20Q9HBF5 79 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 TRBV27A0A0K0K1C4 114 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 TSTD3H0UI37 97 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 RS1O15537 224 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 CRYGDP07320 174 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 IFI27P40305 119 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 RHOHQ15669 191 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 C14orf178Q8N769 122 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 RNASE8Q8TDE3 154 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 TMEM208Q9BTX3 173 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 CSTL1Q9H114 145 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 MDFICQ9P1T7 246 aa4.98□□□□□ -1.61
ECHDC1-210ENST00000454859 TRBV10-1A0A0K0K1A3 114 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 SYS1-DBNDD2H3BUS1 97 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 SCGB1D1O95968 90 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 PRR31Q5SQ13 230 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 UFSP1Q6NVU6 142 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 MRPL52Q86TS9 123 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 C1orf158Q8N1D5 194 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 CSNK1G2-AS1Q8NCQ2 148 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 NCR2O95944 276 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 C3orf79P0CE67 100 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 RBMY1A1P0DJD3 496 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 RBMY1CP0DJD4 496 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 CRYBA4P53673 196 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 POLR2KP53803 58 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 SMAGPQ0VAQ4 97 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 RBMY1FQ15415 496 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 C4orf48Q5BLP8 95 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 LGALS9CQ6DKI2 356 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 Q6ZQT7 251 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 KIR2DL4Q99706 377 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 SORL1Q92673 2214 aa4.97□□□□□ -1.61
ECHDC1-210ENST00000454859 TRAV4A0A0B4J268 109 aa4.96□□□□□ -1.61
ECHDC1-210ENST00000454859 TEX48A0A1B0GUV7 120 aa4.96□□□□□ -1.61
ECHDC1-210ENST00000454859 M0QY20 66 aa4.96□□□□□ -1.61
ECHDC1-210ENST00000454859 IGHV3-53P01767 116 aa4.96□□□□□ -1.61
ECHDC1-210ENST00000454859 RRN3P1Q2M238 152 aa4.96□□□□□ -1.61
ECHDC1-210ENST00000454859 LINC01545Q5VT33 79 aa4.96□□□□□ -1.61
ECHDC1-210ENST00000454859 SUMO4Q6EEV6 95 aa4.96□□□□□ -1.61
ECHDC1-210ENST00000454859 C12orf54Q6X4T0 127 aa4.96□□□□□ -1.61
ECHDC1-210ENST00000454859 C3orf56Q8N813 242 aa4.96□□□□□ -1.61
ECHDC1-210ENST00000454859 WNK1Q9H4A3 2382 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 TRAV12-1A0A0B4J245 112 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 MUC21A0A0G2JKD1 596 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 MUC21A0A140T8X8 626 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 J3QL48 77 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 SPRY2O43597 315 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 MGPP08493 103 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 GIG44P09565 113 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 PRB4P10163 310 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 RIPPLY3P57055 190 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 KRTDAPP60985 99 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 EGFEM1PQ0D2K5 195 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 KRTAP24-1Q3LI83 254 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 FAM19A2Q8N3H0 131 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 TMEM141Q96I45 108 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 XCL2Q9UBD3 114 aa4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 TIMM8BQ9Y5J9 83 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-210ENST00000454859 SVEP1Q4LDE5 3571 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 SETD2Q9BYW2 2564 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 PAPPA-AS1Q5QFB9 102 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 TOMM6Q96B49 74 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 IFI27L1Q96BM0 104 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 VAMP8Q9BV40 100 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 TP53TG1Q9Y2A0 90 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 NF1P21359 2839 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 TRAV9-2A0A087WT02 112 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 F5H697 171 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 I3L3M4 83 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 ZNF56Q15929 161 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 TMEM97Q5BJF2 176 aa4.95□□□□□ -1.62
ECHDC1-210ENST00000454859 CFAP126Q5VTH2 177 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms