RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 LST1O00453 97 aa14.04□□□□□ -0.16
PTPA-223ENST00000452489 CTSGP08311 255 aa14.04□□□□□ -0.16
PTPA-223ENST00000452489 C22orf34Q6ZV56 151 aa14.04□□□□□ -0.16
PTPA-223ENST00000452489 PRSS2P07478 247 aa14.04□□□□□ -0.16
PTPA-223ENST00000452489 ARHGAP32A7KAX9 2087 aa14.03□□□□□ -0.16
PTPA-223ENST00000452489 NPC2P61916 151 aa14.03□□□□□ -0.16
PTPA-223ENST00000452489 SIT1Q9Y3P8 196 aa14.03□□□□□ -0.16
PTPA-223ENST00000452489 A0A0J9YXY3 114 aa14.03□□□□□ -0.16
PTPA-223ENST00000452489 C4orf26Q17RF5 130 aa14.03□□□□□ -0.16
PTPA-223ENST00000452489 OVOL1O14753 267 aa14.02□□□□□ -0.16
PTPA-223ENST00000452489 OXTP01178 125 aa14.02□□□□□ -0.16
PTPA-223ENST00000452489 IGHG3P01860 377 aa14.02□□□□□ -0.16
PTPA-223ENST00000452489 COX6CP09669 75 aa14.02□□□□□ -0.16
PTPA-223ENST00000452489 F5H768 121 aa14.02□□□□□ -0.17
PTPA-223ENST00000452489 TMEM178BH3BS89 294 aa14.02□□□□□ -0.17
PTPA-223ENST00000452489 CRYGAP11844 174 aa14.02□□□□□ -0.17
PTPA-223ENST00000452489 TMEM141Q96I45 108 aa14.02□□□□□ -0.17
PTPA-223ENST00000452489 PHLDA3Q9Y5J5 127 aa14.02□□□□□ -0.17
PTPA-223ENST00000452489 I3L3M4 83 aa14.01□□□□□ -0.17
PTPA-223ENST00000452489 S100A4P26447 101 aaKnown RBP14.01□□□□□ -0.17
PTPA-223ENST00000452489 LINC00643Q86TS7 51 aa14.01□□□□□ -0.17
PTPA-223ENST00000452489 DUX5Q96PT3 197 aa14.01□□□□□ -0.17
PTPA-223ENST00000452489 IGHV3-49A0A0A0MS15 119 aa14□□□□□ -0.17
PTPA-223ENST00000452489 TIMM17AQ99595 171 aa14□□□□□ -0.17
PTPA-223ENST00000452489 A0A1W2PNU3 283 aaPredicted RBP14□□□□□ -0.17
PTPA-223ENST00000452489 LITAFQ99732 161 aa14□□□□□ -0.17
PTPA-223ENST00000452489 ACYP1P07311 99 aa13.99□□□□□ -0.17
PTPA-223ENST00000452489 ADAMTSL4-AS1Q5T5F5 129 aa13.99□□□□□ -0.17
PTPA-223ENST00000452489 BUB3O43684 328 aa13.99□□□□□ -0.17
PTPA-223ENST00000452489 HRCT1Q6UXD1 115 aa13.99□□□□□ -0.17
PTPA-223ENST00000452489 DPH3Q96FX2 82 aa13.98□□□□□ -0.17
PTPA-223ENST00000452489 ATP5G1P05496 136 aa13.98□□□□□ -0.17
PTPA-223ENST00000452489 SEM1Q6ZVN7 128 aa13.98□□□□□ -0.17
PTPA-223ENST00000452489 NBR2O15453 112 aa13.97□□□□□ -0.17
PTPA-223ENST00000452489 NDPQ00604 133 aa13.97□□□□□ -0.17
PTPA-223ENST00000452489 WNK2Q9Y3S1 2297 aa13.97□□□□□ -0.17
PTPA-223ENST00000452489 BOD1L1Q8NFC6 3051 aa13.97□□□□□ -0.17
PTPA-223ENST00000452489 RHOHQ15669 191 aa13.97□□□□□ -0.17
PTPA-223ENST00000452489 DCANP1Q8TF63 244 aa13.97□□□□□ -0.17
PTPA-223ENST00000452489 DSCR8Q96T75 97 aa13.97□□□□□ -0.17
PTPA-223ENST00000452489 SDHAF1A6NFY7 115 aa13.96□□□□□ -0.17
PTPA-223ENST00000452489 C5orf38Q86SI9 138 aa13.96□□□□□ -0.17
PTPA-223ENST00000452489 POLR2KP53803 58 aaKnown RBP13.96□□□□□ -0.18
PTPA-223ENST00000452489 C9orf47Q6ZRZ4 202 aa13.96□□□□□ -0.18
PTPA-223ENST00000452489 TRACP01848 142 aa13.95□□□□□ -0.18
PTPA-223ENST00000452489 NSUN5P1Q3KNT7 163 aa13.95□□□□□ -0.18
PTPA-223ENST00000452489 ZFAND3Q9H8U3 227 aa13.95□□□□□ -0.18
PTPA-223ENST00000452489 PKDREJQ9NTG1 2253 aa13.95□□□□□ -0.18
PTPA-223ENST00000452489 A0A0J9YXV3 536 aa13.95□□□□□ -0.18
PTPA-223ENST00000452489 JPT2Q9H910 190 aa13.95□□□□□ -0.18
PTPA-223ENST00000452489 CEP250Q9BV73 2442 aa13.94□□□□□ -0.18
PTPA-223ENST00000452489 TRAV12-3A0A0B4J271 114 aa13.94□□□□□ -0.18
PTPA-223ENST00000452489 A0A0J9YX75 114 aa13.94□□□□□ -0.18
PTPA-223ENST00000452489 GNRH2O43555 120 aa13.94□□□□□ -0.18
PTPA-223ENST00000452489 PPP1R17O96001 155 aa13.94□□□□□ -0.18
PTPA-223ENST00000452489 SPANXDQ9BXN6 97 aa13.94□□□□□ -0.18
PTPA-223ENST00000452489 COL27A1Q8IZC6 1860 aaPredicted RBP13.93□□□□□ -0.18
PTPA-223ENST00000452489 TPRP12270 2363 aaKnown RBP13.93□□□□□ -0.18
PTPA-223ENST00000452489 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
PTPA-223ENST00000452489 RNF5Q99942 180 aa13.93□□□□□ -0.18
PTPA-223ENST00000452489 IGHV3-30-3P0DP02 117 aa13.93□□□□□ -0.18
PTPA-223ENST00000452489 LINC00315P59091 139 aa13.93□□□□□ -0.18
PTPA-223ENST00000452489 Q5XG85 94 aa13.93□□□□□ -0.18
PTPA-223ENST00000452489 ZNF576Q9H609 170 aa13.93□□□□□ -0.18
PTPA-223ENST00000452489 CLPSL1A2RUU4 121 aa13.92□□□□□ -0.18
PTPA-223ENST00000452489 DEFB1P60022 68 aa13.92□□□□□ -0.18
PTPA-223ENST00000452489 SUMO4Q6EEV6 95 aa13.92□□□□□ -0.18
PTPA-223ENST00000452489 TIMM21Q9BVV7 248 aa13.92□□□□□ -0.18
PTPA-223ENST00000452489 VCYO14598 125 aa13.92□□□□□ -0.18
PTPA-223ENST00000452489 ASCL5Q7RTU5 278 aa13.92□□□□□ -0.18
PTPA-223ENST00000452489 LY6LH3BQJ8 138 aa13.91□□□□□ -0.18
PTPA-223ENST00000452489 RS1O15537 224 aa13.91□□□□□ -0.18
PTPA-223ENST00000452489 CXCL5P42830 114 aa13.91□□□□□ -0.18
PTPA-223ENST00000452489 SDIM1Q6ZPB5 146 aa13.91□□□□□ -0.18
PTPA-223ENST00000452489 HIST1H4AP62805 103 aaKnown RBP13.91□□□□□ -0.18
PTPA-223ENST00000452489 FAM27E3Q08E93 113 aa13.91□□□□□ -0.18
PTPA-223ENST00000452489 TMEM61Q8N0U2 210 aa13.91□□□□□ -0.18
PTPA-223ENST00000452489 KIF25-AS1Q9Y6Z4 181 aa13.91□□□□□ -0.18
PTPA-223ENST00000452489 POLEQ07864 2286 aa13.9□□□□□ -0.18
PTPA-223ENST00000452489 A0A087WWL8 130 aa13.9□□□□□ -0.18
PTPA-223ENST00000452489 RNASE3P12724 160 aaKnown RBP13.9□□□□□ -0.18
PTPA-223ENST00000452489 ZFAND2AQ8N6M9 145 aa13.9□□□□□ -0.18
PTPA-223ENST00000452489 RNF152Q8N8N0 203 aa13.9□□□□□ -0.18
PTPA-223ENST00000452489 FAM19A4Q96LR4 140 aa13.9□□□□□ -0.18
PTPA-223ENST00000452489 IGHV4OR15-8A0A075B7B6 117 aa13.89□□□□□ -0.19
PTPA-223ENST00000452489 A0A087WW49 117 aa13.89□□□□□ -0.19
PTPA-223ENST00000452489 F5H697 171 aa13.89□□□□□ -0.19
PTPA-223ENST00000452489 ATOX1O00244 68 aa13.89□□□□□ -0.19
PTPA-223ENST00000452489 TRAV13-1A0A0B4J241 112 aa13.89□□□□□ -0.19
PTPA-223ENST00000452489 DAZ2Q13117 558 aaKnown RBP13.89□□□□□ -0.19
PTPA-223ENST00000452489 DAZ4Q86SG3 579 aaKnown RBP13.89□□□□□ -0.19
PTPA-223ENST00000452489 C20orf173Q96LM9 149 aa13.89□□□□□ -0.19
PTPA-223ENST00000452489 DAZ1Q9NQZ3 744 aaKnown RBP13.89□□□□□ -0.19
PTPA-223ENST00000452489 DAZ3Q9NR90 486 aaKnown RBP13.89□□□□□ -0.19
PTPA-223ENST00000452489 SPANXCQ9NY87 97 aa13.89□□□□□ -0.19
PTPA-223ENST00000452489 MUC4Q99102 2169 aa13.89□□□□□ -0.19
PTPA-223ENST00000452489 TMEM258P61165 79 aa13.88□□□□□ -0.19
PTPA-223ENST00000452489 MIAQ16674 131 aa13.88□□□□□ -0.19
PTPA-223ENST00000452489 VMO1Q7Z5L0 202 aa13.88□□□□□ -0.19
PTPA-223ENST00000452489 KAAG1Q9UBP8 84 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms