RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 LINC01356Q8N9X3 169 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 OR8A1Q8NGG7 326 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 ZNF747Q9BV97 191 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 RHPN1-AS1Q9BWJ2 59 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 TMEM126AQ9H061 195 aa9.15□□□□□ -0.94
COL27A1-202ENST00000451716 HELZ2Q9BYK8 2649 aaKnown RBP9.15□□□□□ -0.94
COL27A1-202ENST00000451716 NOTCH2Q04721 2471 aa9.15□□□□□ -0.95
COL27A1-202ENST00000451716 SMIM13P0DJ93 91 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 TTC32Q5I0X7 151 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 WFDC3Q8IUB2 231 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 ZNF843Q8N446 348 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 A0A096LNT2 108 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 GAGE13Q4V321 117 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 C9orf139Q6ZV77 190 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 RHODO00212 210 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 SLC25A16P16260 332 aa9.14□□□□□ -0.95
COL27A1-202ENST00000451716 SRSF2Q01130 221 aaKnown RBP9.14□□□□□ -0.95
COL27A1-202ENST00000451716 MRPL53Q96EL3 112 aaKnown RBP9.14□□□□□ -0.95
COL27A1-202ENST00000451716 SOCS3O14543 225 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 DSCR9P59020 149 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 CFHR3Q02985 330 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 CNFNQ9BYD5 112 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 APCP25054 2843 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 TRAV26-2A0A0B4J265 109 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 IGHV7-4-1A0A0J9YVY3 117 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 H3BUA1 57 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 H3BVH4 76 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 IFITM1P13164 125 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 TCTAP57738 103 aa9.13□□□□□ -0.95
COL27A1-202ENST00000451716 AMTNQ6UX39 209 aa9.12□□□□□ -0.95
COL27A1-202ENST00000451716 SETD2Q9BYW2 2564 aaPredicted RBP9.12□□□□□ -0.95
COL27A1-202ENST00000451716 OR10J6PQ8NGY7 276 aa9.12□□□□□ -0.95
COL27A1-202ENST00000451716 DAZ1Q9NQZ3 744 aaKnown RBP9.12□□□□□ -0.95
COL27A1-202ENST00000451716 SEC61GP60059 68 aa9.11□□□□□ -0.95
COL27A1-202ENST00000451716 GAGE2BQ13066 116 aa9.11□□□□□ -0.95
COL27A1-202ENST00000451716 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
COL27A1-202ENST00000451716 ZFAND2AQ8N6M9 145 aa9.11□□□□□ -0.95
COL27A1-202ENST00000451716 SPANXA1Q9NS26 97 aa9.11□□□□□ -0.95
COL27A1-202ENST00000451716 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
COL27A1-202ENST00000451716 SPANXN1Q5VSR9 72 aa9.11□□□□□ -0.95
COL27A1-202ENST00000451716 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
COL27A1-202ENST00000451716 ITPR2Q14571 2701 aa9.11□□□□□ -0.95
COL27A1-202ENST00000451716 K7ERJ3 54 aa9.1□□□□□ -0.95
COL27A1-202ENST00000451716 PSMB8P28062 276 aa9.1□□□□□ -0.95
COL27A1-202ENST00000451716 LINC01545Q5VT33 79 aa9.1□□□□□ -0.95
COL27A1-202ENST00000451716 PRRC2AP48634 2157 aaKnown RBP9.1□□□□□ -0.95
COL27A1-202ENST00000451716 NF1P21359 2839 aa9.1□□□□□ -0.95
COL27A1-202ENST00000451716 FASNP49327 2511 aaKnown RBP9.1□□□□□ -0.95
COL27A1-202ENST00000451716 RNASE4P34096 147 aaKnown RBP9.1□□□□□ -0.95
COL27A1-202ENST00000451716 BEX4Q9NWD9 120 aaPredicted RBP9.1□□□□□ -0.95
COL27A1-202ENST00000451716 NFE4Q86UQ8 179 aa9.1□□□□□ -0.95
COL27A1-202ENST00000451716 M0R381 172 aa9.09□□□□□ -0.95
COL27A1-202ENST00000451716 HBDP02042 147 aa9.09□□□□□ -0.95
COL27A1-202ENST00000451716 FGF6P10767 208 aa9.09□□□□□ -0.95
COL27A1-202ENST00000451716 LINC00477Q96M19 166 aa9.09□□□□□ -0.95
COL27A1-202ENST00000451716 PRO0461Q9UI25 63 aa9.09□□□□□ -0.95
COL27A1-202ENST00000451716 AGRNO00468 2067 aa9.09□□□□□ -0.95
COL27A1-202ENST00000451716 CACNG7P62955 275 aa9.09□□□□□ -0.95
COL27A1-202ENST00000451716 OR13C6PQ8NH95 151 aa9.09□□□□□ -0.95
COL27A1-202ENST00000451716 CR1P17927 2039 aa9.08□□□□□ -0.96
COL27A1-202ENST00000451716 C9JAW5 83 aa9.08□□□□□ -0.96
COL27A1-202ENST00000451716 OVOL1O14753 267 aa9.08□□□□□ -0.96
COL27A1-202ENST00000451716 EMP1P54849 157 aa9.08□□□□□ -0.96
COL27A1-202ENST00000451716 MRAPQ8TCY5 172 aa9.08□□□□□ -0.96
COL27A1-202ENST00000451716 TMEM160Q9NX00 188 aa9.08□□□□□ -0.96
COL27A1-202ENST00000451716 HECTD1Q9ULT8 2610 aa9.08□□□□□ -0.96
COL27A1-202ENST00000451716 GNRH2O43555 120 aa9.08□□□□□ -0.96
COL27A1-202ENST00000451716 IGHV4-31P0DP07 118 aa9.08□□□□□ -0.96
COL27A1-202ENST00000451716 S100A4P26447 101 aaKnown RBP9.07□□□□□ -0.96
COL27A1-202ENST00000451716 LEPP41159 167 aa9.07□□□□□ -0.96
COL27A1-202ENST00000451716 TMEM101Q96IK0 257 aa9.07□□□□□ -0.96
COL27A1-202ENST00000451716 ITPR3Q14573 2671 aa9.07□□□□□ -0.96
COL27A1-202ENST00000451716 HIST2H2BDQ6DRA6 164 aa9.07□□□□□ -0.96
COL27A1-202ENST00000451716 IFI27L1Q96BM0 104 aa9.07□□□□□ -0.96
COL27A1-202ENST00000451716 EDA2RQ9HAV5 297 aa9.07□□□□□ -0.96
COL27A1-202ENST00000451716 ACANP16112 2415 aa9.07□□□□□ -0.96
COL27A1-202ENST00000451716 TRAV21A0A0B4J279 112 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 HOXA3O43365 443 aaPredicted RBP9.06□□□□□ -0.96
COL27A1-202ENST00000451716 IGKV3-20P01619 116 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 GCSHP23434 173 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 J3KT08 172 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 ZNF688P0C7X2 276 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 SYNJ2BPP57105 145 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 OR9G4Q8NGQ1 327 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 J3QLI3 93 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 DCANP1Q8TF63 244 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 RASL10AQ92737 203 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 DKK2Q9UBU2 259 aa9.06□□□□□ -0.96
COL27A1-202ENST00000451716 E9PLD3 99 aa9.05□□□□□ -0.96
COL27A1-202ENST00000451716 FXYD2P54710 66 aa9.05□□□□□ -0.96
COL27A1-202ENST00000451716 NRACQ8N912 160 aa9.05□□□□□ -0.96
COL27A1-202ENST00000451716 GCN1Q92616 2671 aaKnown RBP9.05□□□□□ -0.96
COL27A1-202ENST00000451716 C14orf178Q8N769 122 aaPredicted RBP9.05□□□□□ -0.96
COL27A1-202ENST00000451716 ATP6V0E2Q8NHE4 81 aa9.05□□□□□ -0.96
COL27A1-202ENST00000451716 TMEM158Q8WZ71 300 aa9.05□□□□□ -0.96
COL27A1-202ENST00000451716 Q96MF0 132 aa9.05□□□□□ -0.96
COL27A1-202ENST00000451716 LINC01587Q99440 93 aa9.05□□□□□ -0.96
COL27A1-202ENST00000451716 TRAV4A0A0B4J268 109 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms