RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 HIGD1CA8MV81 97 aa10.1□□□□□ -0.79
SHMT2-203ENST00000449049 NAT8BQ9UHF3 227 aa10.1□□□□□ -0.79
SHMT2-203ENST00000449049 IGHV4-28A0A0C4DH34 117 aa10.09□□□□□ -0.79
SHMT2-203ENST00000449049 F2Z2F3 143 aa10.09□□□□□ -0.79
SHMT2-203ENST00000449049 LYZL1Q6UWQ5 148 aa10.09□□□□□ -0.79
SHMT2-203ENST00000449049 NUP35Q8NFH5 326 aa10.09□□□□□ -0.79
SHMT2-203ENST00000449049 SPXQ9BT56 116 aa10.09□□□□□ -0.79
SHMT2-203ENST00000449049 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
SHMT2-203ENST00000449049 TPPP3Q9BW30 176 aa10.09□□□□□ -0.79
SHMT2-203ENST00000449049 CNFNQ9BYD5 112 aa10.09□□□□□ -0.79
SHMT2-203ENST00000449049 TIMM8BQ9Y5J9 83 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-203ENST00000449049 SNURFLB1AK76 121 aa10.08□□□□□ -0.8
SHMT2-203ENST00000449049 SCGB1D1O95968 90 aa10.08□□□□□ -0.8
SHMT2-203ENST00000449049 KCNIP4Q6PIL6 250 aa10.08□□□□□ -0.8
SHMT2-203ENST00000449049 PGLYRP4Q96LB8 373 aa10.08□□□□□ -0.8
SHMT2-203ENST00000449049 ZMAT4Q9H898 229 aa10.08□□□□□ -0.8
SHMT2-203ENST00000449049 NXPH4O95158 308 aa10.07□□□□□ -0.8
SHMT2-203ENST00000449049 WDR73Q6P4I2 378 aa10.07□□□□□ -0.8
SHMT2-203ENST00000449049 OR10AG1Q8NH19 301 aa10.07□□□□□ -0.8
SHMT2-203ENST00000449049 PTH2Q96A98 100 aa10.07□□□□□ -0.8
SHMT2-203ENST00000449049 PHLDA3Q9Y5J5 127 aa10.07□□□□□ -0.8
SHMT2-203ENST00000449049 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
SHMT2-203ENST00000449049 TRAV9-1A0A075B6T8 112 aa10.06□□□□□ -0.8
SHMT2-203ENST00000449049 M0R2P5 195 aa10.06□□□□□ -0.8
SHMT2-203ENST00000449049 SPINK4O60575 86 aa10.06□□□□□ -0.8
SHMT2-203ENST00000449049 CACNG7P62955 275 aa10.06□□□□□ -0.8
SHMT2-203ENST00000449049 SMIM15Q7Z3B0 74 aa10.06□□□□□ -0.8
SHMT2-203ENST00000449049 C11orf68Q9H3H3 251 aaKnown RBP10.06□□□□□ -0.8
SHMT2-203ENST00000449049 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
SHMT2-203ENST00000449049 BORCS7Q96B45 105 aa10.06□□□□□ -0.8
SHMT2-203ENST00000449049 BTF3L4Q96K17 158 aa10.06□□□□□ -0.8
SHMT2-203ENST00000449049 NOP10Q9NPE3 64 aaKnown RBP10.06□□□□□ -0.8
SHMT2-203ENST00000449049 MUC21A0A0G2JKD1 596 aa10.05□□□□□ -0.8
SHMT2-203ENST00000449049 MUC21A0A140T8X8 626 aa10.05□□□□□ -0.8
SHMT2-203ENST00000449049 A0A1B0GUT8 65 aa10.05□□□□□ -0.8
SHMT2-203ENST00000449049 DEFB4AO15263 64 aa10.05□□□□□ -0.8
SHMT2-203ENST00000449049 NHLRC4P0CG21 123 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-203ENST00000449049 EMP1P54849 157 aa10.05□□□□□ -0.8
SHMT2-203ENST00000449049 PIK3CD-AS1Q5SR53 167 aa10.05□□□□□ -0.8
SHMT2-203ENST00000449049 M0R381 172 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 SPANXN1Q5VSR9 72 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 SYT8Q8NBV8 401 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 RASL10AQ92737 203 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 LYRM9A8MSI8 78 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 NTF3P20783 257 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 ZNF876PQ49A33 203 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 ATP5L2Q7Z4Y8 100 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 LINC00612Q8N6U2 182 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 MRPL16Q9NX20 251 aaKnown RBP10.04□□□□□ -0.8
SHMT2-203ENST00000449049 TRAPPC1Q9Y5R8 145 aa10.04□□□□□ -0.8
SHMT2-203ENST00000449049 MUC4Q99102 2169 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 A0A1B0GXF2 115 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 K7EP13 123 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 RIGQ13278 110 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 DKK2Q9UBU2 259 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 TRGV1A0A0A0MS02 117 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 A6NJY4 79 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 FAM222AQ5U5X8 452 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 MRPL54Q6P161 138 aaKnown RBP10.03□□□□□ -0.8
SHMT2-203ENST00000449049 Q6ZTI0 123 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 MIEN1Q9BRT3 115 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 MSRB1Q9NZV6 116 aa10.03□□□□□ -0.8
SHMT2-203ENST00000449049 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
SHMT2-203ENST00000449049 A0A1B0GW15 77 aa10.02□□□□□ -0.81
SHMT2-203ENST00000449049 NUPR1O60356 82 aa10.02□□□□□ -0.81
SHMT2-203ENST00000449049 PPBPP02775 128 aa10.02□□□□□ -0.81
SHMT2-203ENST00000449049 TWIST1Q15672 202 aa10.02□□□□□ -0.81
SHMT2-203ENST00000449049 MEGF8Q7Z7M0 2845 aa10.02□□□□□ -0.81
SHMT2-203ENST00000449049 CELA1Q9UNI1 258 aa10.01□□□□□ -0.81
SHMT2-203ENST00000449049 TEX48A0A1B0GUV7 120 aa10.01□□□□□ -0.81
SHMT2-203ENST00000449049 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
SHMT2-203ENST00000449049 HBBP68871 147 aa10.01□□□□□ -0.81
SHMT2-203ENST00000449049 TEX43Q6ZNM6 134 aa10.01□□□□□ -0.81
SHMT2-203ENST00000449049 GAGE12BA1L429 117 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 GAGE7O76087 117 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 GAGE12FP0CL80 117 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 GAGE12GP0CL81 117 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 GAGE12IP0CL82 117 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 RASL11AQ6T310 242 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 GATD1Q8NB37 220 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 C18orf15Q96N68 181 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 AP1S3Q96PC3 154 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 A8MWV9 139 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 JPT2Q9H910 190 aa10□□□□□ -0.81
SHMT2-203ENST00000449049 RS1O15537 224 aa9.99□□□□□ -0.81
SHMT2-203ENST00000449049 ESDP10768 282 aa9.99□□□□□ -0.81
SHMT2-203ENST00000449049 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
SHMT2-203ENST00000449049 DNAH9Q9NYC9 4486 aa9.99□□□□□ -0.81
SHMT2-203ENST00000449049 TMEM238C9JI98 176 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 CAMPP49913 170 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 CFAP126Q5VTH2 177 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 POM121L12Q8N7R1 296 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 TMEM191AQ9H0A3 160 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 HUWE1Q7Z6Z7 4374 aaKnown RBP9.98□□□□□ -0.81
SHMT2-203ENST00000449049 TRGV2A0A075B6R0 118 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 TRAV4A0A0B4J268 109 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 C20orf202A1L168 122 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 CRYGDP07320 174 aa9.98□□□□□ -0.81
SHMT2-203ENST00000449049 DEFB130BP0DP73 79 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms