RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 POM121L12Q8N7R1 296 aa15.01□□□□□ -0.01
VPS13B-204ENST00000441350 SAMD10Q9BYL1 202 aa15.01□□□□□ -0.01
VPS13B-204ENST00000441350 CELA1Q9UNI1 258 aa15.01□□□□□ -0.01
VPS13B-204ENST00000441350 NACAE9PAV3 2078 aa15.01□□□□□ -0.01
VPS13B-204ENST00000441350 COL7A1Q02388 2944 aa15□□□□□ -0.01
VPS13B-204ENST00000441350 RS1O15537 224 aa15□□□□□ -0.01
VPS13B-204ENST00000441350 LINC00315P59091 139 aa15□□□□□ -0.01
VPS13B-204ENST00000441350 C18orf15Q96N68 181 aa15□□□□□ -0.01
VPS13B-204ENST00000441350 A0A087WWL8 130 aa14.99□□□□□ -0.01
VPS13B-204ENST00000441350 HLA-DQA1P01909 254 aa14.99□□□□□ -0.01
VPS13B-204ENST00000441350 MT-ND6P03923 174 aa14.99□□□□□ -0.01
VPS13B-204ENST00000441350 NHLRC4P0CG21 123 aaPredicted RBP14.99□□□□□ -0.01
VPS13B-204ENST00000441350 SPART-AS1P0CW21 52 aa14.99□□□□□ -0.01
VPS13B-204ENST00000441350 FAM104BQ5XKR9 115 aa14.99□□□□□ -0.01
VPS13B-204ENST00000441350 DPH3P1Q9H4G8 78 aa14.99□□□□□ -0.01
VPS13B-204ENST00000441350 A0A0J9YWU9 116 aa14.99□□□□□ -0.01
VPS13B-204ENST00000441350 RPS10P46783 165 aaKnown RBP14.99□□□□□ -0.01
VPS13B-204ENST00000441350 UFSP1Q6NVU6 142 aa14.99□□□□□ -0.01
VPS13B-204ENST00000441350 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.99□□□□□ -0.01
VPS13B-204ENST00000441350 TRGV2A0A075B6R0 118 aa14.98□□□□□ -0.01
VPS13B-204ENST00000441350 TRAV4A0A0B4J268 109 aa14.98□□□□□ -0.01
VPS13B-204ENST00000441350 SMIM17P0DL12 118 aa14.98□□□□□ -0.01
VPS13B-204ENST00000441350 DEFB130BP0DP73 79 aa14.98□□□□□ -0.01
VPS13B-204ENST00000441350 DEFB130AP0DP74 79 aa14.98□□□□□ -0.01
VPS13B-204ENST00000441350 SLAQ13239 276 aa14.98□□□□□ -0.01
VPS13B-204ENST00000441350 AMN1Q8IY45 258 aa14.98□□□□□ -0.01
VPS13B-204ENST00000441350 RNF185Q96GF1 192 aa14.98□□□□□ -0.01
VPS13B-204ENST00000441350 TEX48A0A1B0GUV7 120 aa14.97□□□□□ -0.01
VPS13B-204ENST00000441350 RAB4AP20338 218 aa14.97□□□□□ -0.01
VPS13B-204ENST00000441350 OR4C5Q8NGB2 326 aa14.97□□□□□ -0.01
VPS13B-204ENST00000441350 TRAPPC1Q9Y5R8 145 aa14.97□□□□□ -0.01
VPS13B-204ENST00000441350 FAM74A4Q5TZK3 123 aa14.96□□□□□ -0.01
VPS13B-204ENST00000441350 MRPL18Q9H0U6 180 aaKnown RBP14.96□□□□□ -0.01
VPS13B-204ENST00000441350 ZFP2Q6ZN57 461 aa14.95□□□□□ -0.02
VPS13B-204ENST00000441350 ZNF479Q96JC4 524 aa14.95□□□□□ -0.02
VPS13B-204ENST00000441350 RHODO00212 210 aa14.95□□□□□ -0.02
VPS13B-204ENST00000441350 APCSP02743 223 aa14.95□□□□□ -0.02
VPS13B-204ENST00000441350 DAD1P61803 113 aa14.95□□□□□ -0.02
VPS13B-204ENST00000441350 FRZBQ92765 325 aa14.95□□□□□ -0.02
VPS13B-204ENST00000441350 FABP9Q0Z7S8 132 aa14.94□□□□□ -0.02
VPS13B-204ENST00000441350 MRPL51Q4U2R6 128 aaKnown RBP14.94□□□□□ -0.02
VPS13B-204ENST00000441350 CIDEAO60543 219 aa14.93□□□□□ -0.02
VPS13B-204ENST00000441350 IGHV3-53P01767 116 aa14.93□□□□□ -0.02
VPS13B-204ENST00000441350 TRGC2P03986 189 aa14.93□□□□□ -0.02
VPS13B-204ENST00000441350 MGPP08493 103 aa14.93□□□□□ -0.02
VPS13B-204ENST00000441350 IGHV3-73A0A0B4J1V6 119 aa14.92□□□□□ -0.02
VPS13B-204ENST00000441350 PHOX2AO14813 284 aa14.92□□□□□ -0.02
VPS13B-204ENST00000441350 C12orf74Q32Q52 190 aa14.92□□□□□ -0.02
VPS13B-204ENST00000441350 FBN3Q75N90 2809 aa14.92□□□□□ -0.02
VPS13B-204ENST00000441350 KIAA1644Q3SXP7 199 aa14.91□□□□□ -0.02
VPS13B-204ENST00000441350 Q6ZSN1 163 aa14.91□□□□□ -0.02
VPS13B-204ENST00000441350 MRAP2Q96G30 205 aa14.91□□□□□ -0.02
VPS13B-204ENST00000441350 U3KQK5 164 aa14.91□□□□□ -0.02
VPS13B-204ENST00000441350 F5H697 171 aa14.9□□□□□ -0.02
VPS13B-204ENST00000441350 FHL2Q14192 279 aa14.9□□□□□ -0.02
VPS13B-204ENST00000441350 ZNF56Q15929 161 aa14.9□□□□□ -0.02
VPS13B-204ENST00000441350 SUMO4Q6EEV6 95 aa14.9□□□□□ -0.02
VPS13B-204ENST00000441350 TRAV26-2A0A0B4J265 109 aa14.89□□□□□ -0.03
VPS13B-204ENST00000441350 C11orf45Q8TAV5 145 aa14.89□□□□□ -0.03
VPS13B-204ENST00000441350 GAS8-AS1O95177 125 aa14.88□□□□□ -0.03
VPS13B-204ENST00000441350 PPBPP02775 128 aa14.88□□□□□ -0.03
VPS13B-204ENST00000441350 EDA2RQ9HAV5 297 aa14.88□□□□□ -0.03
VPS13B-204ENST00000441350 STAB2Q8WWQ8 2551 aa14.88□□□□□ -0.03
VPS13B-204ENST00000441350 D6R8Y8 96 aa14.88□□□□□ -0.03
VPS13B-204ENST00000441350 SMKR1H3BMG3 65 aa14.88□□□□□ -0.03
VPS13B-204ENST00000441350 M0QY20 66 aa14.88□□□□□ -0.03
VPS13B-204ENST00000441350 ATP5G1P05496 136 aa14.88□□□□□ -0.03
VPS13B-204ENST00000441350 CKS2P33552 79 aa14.88□□□□□ -0.03
VPS13B-204ENST00000441350 NCR2O95944 276 aa14.87□□□□□ -0.03
VPS13B-204ENST00000441350 GATA1P15976 413 aaPredicted RBP14.87□□□□□ -0.03
VPS13B-204ENST00000441350 HOXA5P20719 270 aa14.87□□□□□ -0.03
VPS13B-204ENST00000441350 ORMDL3Q8N138 153 aa14.87□□□□□ -0.03
VPS13B-204ENST00000441350 TRGV4A0A0C4DH28 118 aa14.86□□□□□ -0.03
VPS13B-204ENST00000441350 NANOS2P60321 138 aaKnown RBP14.86□□□□□ -0.03
VPS13B-204ENST00000441350 ALKBH7Q9BT30 221 aaPredicted RBP14.86□□□□□ -0.03
VPS13B-204ENST00000441350 Q6ZTC4 211 aa14.85□□□□□ -0.03
VPS13B-204ENST00000441350 SLC25A29Q8N8R3 303 aa14.84□□□□□ -0.03
VPS13B-204ENST00000441350 NRACQ8N912 160 aa14.84□□□□□ -0.03
VPS13B-204ENST00000441350 PRELID3AQ96N28 172 aa14.84□□□□□ -0.03
VPS13B-204ENST00000441350 TRBV6-4A0A1B0GX49 114 aa14.84□□□□□ -0.03
VPS13B-204ENST00000441350 H7C1H1 209 aa14.84□□□□□ -0.03
VPS13B-204ENST00000441350 SRIP30626 198 aa14.84□□□□□ -0.03
VPS13B-204ENST00000441350 HHLA3Q9XRX5 114 aa14.84□□□□□ -0.03
VPS13B-204ENST00000441350 RPL39LQ96EH5 51 aaKnown RBP14.83□□□□□ -0.04
VPS13B-204ENST00000441350 C1orf196B1AJZ1 125 aa14.82□□□□□ -0.04
VPS13B-204ENST00000441350 K7EQD1 137 aa14.82□□□□□ -0.04
VPS13B-204ENST00000441350 NPYP01303 97 aa14.82□□□□□ -0.04
VPS13B-204ENST00000441350 P0DMU3 169 aa14.82□□□□□ -0.04
VPS13B-204ENST00000441350 FAM231AP0DMU4 169 aa14.82□□□□□ -0.04
VPS13B-204ENST00000441350 FAM231CP0DMU5 169 aa14.82□□□□□ -0.04
VPS13B-204ENST00000441350 Q9UF83 564 aa14.82□□□□□ -0.04
VPS13B-204ENST00000441350 LAMTOR2Q9Y2Q5 125 aa14.82□□□□□ -0.04
VPS13B-204ENST00000441350 TNFRSF6BO95407 300 aa14.81□□□□□ -0.04
VPS13B-204ENST00000441350 PPP1R17O96001 155 aa14.81□□□□□ -0.04
VPS13B-204ENST00000441350 CRYBA4P53673 196 aa14.81□□□□□ -0.04
VPS13B-204ENST00000441350 NIT2Q9NQR4 276 aa14.81□□□□□ -0.04
VPS13B-204ENST00000441350 PRO0255Q9UI72 69 aa14.81□□□□□ -0.04
VPS13B-204ENST00000441350 F5H768 121 aa14.81□□□□□ -0.04
VPS13B-204ENST00000441350 HTN3P15516 51 aa14.81□□□□□ -0.04
VPS13B-204ENST00000441350 TRBV10-1A0A0K0K1A3 114 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms