RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SPRR2DP22532 72 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 S100PP25815 95 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 RPS28P62857 69 aaKnown RBP-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 CFAP126Q5VTH2 177 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 SLC25A26Q70HW3 274 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 SMIM15Q7Z3B0 74 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 CTAGE3PQ8IX95 158 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 Q96NJ1 140 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 TP53AIP1Q9HCN2 124 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 BET1LQ9NYM9 111 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 NDUFAF1Q9Y375 327 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 TSC2P49815 1807 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 FAM208BQ5VWN6 2430 aa-0.09□□□□□ -2.42
PFDN4-202ENST00000441080 TANC1Q9C0D5 1861 aa-0.1□□□□□ -2.42
PFDN4-202ENST00000441080 PLXNB2O15031 1838 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 C10orf71Q711Q0 1435 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 LRP1Q07954 4544 aaKnown RBP-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 PPRC1Q5VV67 1664 aaKnown RBP-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 PBRM1Q86U86 1689 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 STAB1Q9NY15 2570 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 TRAV12-2A0A075B6T6 113 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 TRBV7-1A0A0A6YYK4 115 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 TRAV1-2A0A0B4J238 106 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 TRBV6-1A0A0K0K1D8 114 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 CXorf51AA0A1B0GTR3 108 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 H0YAA0 97 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 ARPC5O15511 151 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 MT-ATP8P03928 68 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 PAEPP09466 180 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 SPINK8P0C7L1 97 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 COX8AP10176 69 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 SNCAP37840 140 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 UBE2D3P61077 147 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 UBE2D2P62837 147 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 UBA52P62987 128 aaKnown RBP-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 KRTAP20-1Q3LI63 56 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 CYP2G1PQ6ZSU1 146 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 SNX29P2Q8IUI4 249 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 LINC01600Q96MT4 127 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 TTTY10Q9BZA0 68 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 BPESC1Q9GZL8 116 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 SLC35B3Q9H1N7 401 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 LINC00846Q9NV44 126 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 TMEM242Q9NWH2 141 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 TAS2R8Q9NYW2 309 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 S4R3F8 94 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 SLIT1O75093 1534 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 DLEC1Q9Y238 1755 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 WDR97A6NE52 1622 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 LRP5O75197 1615 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 WDR7Q9Y4E6 1490 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 OTOGQ6ZRI0 2925 aa-0.1□□□□□ -2.43
PFDN4-202ENST00000441080 WNK2Q9Y3S1 2297 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 HIVEP1P15822 2718 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 LAMB1P07942 1786 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 KIDINS220Q9ULH0 1771 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 CACNA1CQ13936 2221 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 A0A087WTM6 91 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 FAM236AA0A1B0GUQ0 79 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 FAM236BA0A1B0GV22 79 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 A6NIN4 97 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 F8VRH5 84 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 TSTD3H0UI37 97 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 I3L3M4 83 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 DEFB4AO15263 64 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 BCE1O60756 84 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 SNCGO76070 127 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 MT-ND4LP03901 98 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 MGPP08493 103 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 SCGB1A1P11684 91 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 COX6B1P14854 86 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 SPRR1BP22528 89 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 SPRR2EP22531 72 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 SPRR2BP35325 72 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 SPRR2AP35326 72 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 CCDC153Q494R4 210 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 S100A7L2Q5SY68 101 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 TMEM170BQ5T4T1 132 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 SLC48A1Q6P1K1 146 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 CLPSL2Q6UWE3 100 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 TMEM91Q6ZNR0 172 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 ZNF818PQ6ZRF7 136 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 C4orf33Q8N1A6 199 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 SMIM11BQ8TCY0 68 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 PP6455Q8WZ26 134 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 MRPL34Q9BQ48 92 aaKnown RBP-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 CYP4F30PQ9H0H9 118 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 DPH3P1Q9H4G8 78 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 NAA60Q9H7X0 242 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 TPT1P8Q9HAU6 139 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 PSENENQ9NZ42 101 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 SCP2D1Q9UJQ7 156 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 V9GYV3 84 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 EP300Q09472 2414 aaPredicted RBP-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 POLA1P09884 1462 aaPredicted RBP-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 ZANQ9Y493 2812 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 UNC13BO14795 1591 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 DOPEY1Q5JWR5 2465 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 CELSR2Q9HCU4 2923 aa-0.11□□□□□ -2.43
PFDN4-202ENST00000441080 LAMC3Q9Y6N6 1575 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms