RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 AKR1C3P42330 323 aa11.94□□□□□ -0.5
CPNE1-213ENST00000434795 MLST8Q9BVC4 326 aa11.94□□□□□ -0.5
CPNE1-213ENST00000434795 PHLDA3Q9Y5J5 127 aa11.94□□□□□ -0.5
CPNE1-213ENST00000434795 A0A1B0GV50 99 aa11.93□□□□□ -0.5
CPNE1-213ENST00000434795 KANTRA0A1W2PQU2 76 aa11.93□□□□□ -0.5
CPNE1-213ENST00000434795 H2AFB1P0C5Y9 115 aa11.93□□□□□ -0.5
CPNE1-213ENST00000434795 TPT1P13693 172 aaKnown RBP11.93□□□□□ -0.5
CPNE1-213ENST00000434795 TMUB2Q71RG4 321 aa11.93□□□□□ -0.5
CPNE1-213ENST00000434795 Q8N3U1 123 aa11.93□□□□□ -0.5
CPNE1-213ENST00000434795 A0A087WWL8 130 aa11.92□□□□□ -0.5
CPNE1-213ENST00000434795 RHODO00212 210 aa11.92□□□□□ -0.5
CPNE1-213ENST00000434795 PSCAO43653 123 aa11.92□□□□□ -0.5
CPNE1-213ENST00000434795 GCSHP23434 173 aa11.92□□□□□ -0.5
CPNE1-213ENST00000434795 BAGE2Q86Y30 109 aa11.92□□□□□ -0.5
CPNE1-213ENST00000434795 Q9HAA7 133 aa11.92□□□□□ -0.5
CPNE1-213ENST00000434795 FAT1Q14517 4588 aa11.92□□□□□ -0.5
CPNE1-213ENST00000434795 A0A087WWC5 75 aa11.91□□□□□ -0.5
CPNE1-213ENST00000434795 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
CPNE1-213ENST00000434795 M0R381 172 aa11.91□□□□□ -0.5
CPNE1-213ENST00000434795 EIF5AP63241 154 aaKnown RBP11.91□□□□□ -0.5
CPNE1-213ENST00000434795 CCL20P78556 96 aa11.91□□□□□ -0.5
CPNE1-213ENST00000434795 LAGE3Q14657 143 aa11.9□□□□□ -0.5
CPNE1-213ENST00000434795 FAM74A4Q5TZK3 123 aa11.9□□□□□ -0.5
CPNE1-213ENST00000434795 ZFP82Q8N141 532 aa11.9□□□□□ -0.5
CPNE1-213ENST00000434795 RPL19P84098 196 aaKnown RBP11.89□□□□□ -0.51
CPNE1-213ENST00000434795 DAZ4Q86SG3 579 aaKnown RBP11.89□□□□□ -0.51
CPNE1-213ENST00000434795 SSBP4Q9BWG4 385 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-213ENST00000434795 TM2D2Q9BX73 214 aa11.89□□□□□ -0.51
CPNE1-213ENST00000434795 DAZ3Q9NR90 486 aaKnown RBP11.89□□□□□ -0.51
CPNE1-213ENST00000434795 TRAV1-1A0A0B4J248 108 aa11.88□□□□□ -0.51
CPNE1-213ENST00000434795 PFDN1O60925 122 aa11.88□□□□□ -0.51
CPNE1-213ENST00000434795 Q8N814 137 aa11.88□□□□□ -0.51
CPNE1-213ENST00000434795 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-213ENST00000434795 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
CPNE1-213ENST00000434795 TRBV10-1A0A0K0K1A3 114 aa11.87□□□□□ -0.51
CPNE1-213ENST00000434795 CXCL1P09341 107 aa11.87□□□□□ -0.51
CPNE1-213ENST00000434795 IGLV5-52A0A0A0MRZ9 124 aa11.86□□□□□ -0.51
CPNE1-213ENST00000434795 EPM2AB3EWF7 344 aa11.86□□□□□ -0.51
CPNE1-213ENST00000434795 NIT1Q86X76 327 aa11.86□□□□□ -0.51
CPNE1-213ENST00000434795 OR10AG1Q8NH19 301 aa11.86□□□□□ -0.51
CPNE1-213ENST00000434795 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
CPNE1-213ENST00000434795 SNAI2O43623 268 aa11.85□□□□□ -0.51
CPNE1-213ENST00000434795 RPL35P42766 123 aaKnown RBP11.85□□□□□ -0.51
CPNE1-213ENST00000434795 RAB4BP61018 213 aa11.85□□□□□ -0.51
CPNE1-213ENST00000434795 UBE2D3P61077 147 aa11.85□□□□□ -0.51
CPNE1-213ENST00000434795 UBE2D2P62837 147 aa11.85□□□□□ -0.51
CPNE1-213ENST00000434795 OR10G8Q8NGN5 311 aa11.85□□□□□ -0.51
CPNE1-213ENST00000434795 DNAH8Q96JB1 4490 aa11.85□□□□□ -0.51
CPNE1-213ENST00000434795 OR5AL1P0C617 328 aa11.84□□□□□ -0.51
CPNE1-213ENST00000434795 RAB5CP51148 216 aa11.84□□□□□ -0.51
CPNE1-213ENST00000434795 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
CPNE1-213ENST00000434795 WFDC2Q14508 124 aa11.84□□□□□ -0.51
CPNE1-213ENST00000434795 PRR27Q6MZM9 219 aa11.84□□□□□ -0.51
CPNE1-213ENST00000434795 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
CPNE1-213ENST00000434795 GNG13Q9P2W3 67 aa11.84□□□□□ -0.51
CPNE1-213ENST00000434795 MUC21A0A0G2JKD1 596 aa11.83□□□□□ -0.52
CPNE1-213ENST00000434795 MUC21A0A140T8X8 626 aa11.83□□□□□ -0.52
CPNE1-213ENST00000434795 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
CPNE1-213ENST00000434795 C11orf52Q96A22 123 aa11.83□□□□□ -0.52
CPNE1-213ENST00000434795 DNAJC30Q96LL9 226 aa11.83□□□□□ -0.52
CPNE1-213ENST00000434795 DERL1Q9BUN8 251 aa11.83□□□□□ -0.52
CPNE1-213ENST00000434795 MANBALQ9NQG1 85 aa11.83□□□□□ -0.52
CPNE1-213ENST00000434795 VPS13BQ7Z7G8 4022 aa11.82□□□□□ -0.52
CPNE1-213ENST00000434795 IGLV2-8P01709 118 aa11.82□□□□□ -0.52
CPNE1-213ENST00000434795 KIF25-AS1Q9Y6Z4 181 aa11.82□□□□□ -0.52
CPNE1-213ENST00000434795 SRRM2Q9UQ35 2752 aaKnown RBP11.82□□□□□ -0.52
CPNE1-213ENST00000434795 SMR3BP02814 79 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-213ENST00000434795 SULT1A2P50226 295 aa11.81□□□□□ -0.52
CPNE1-213ENST00000434795 EIF5AL1Q6IS14 154 aaKnown RBP11.81□□□□□ -0.52
CPNE1-213ENST00000434795 TCTE3Q8IZS6 198 aa11.81□□□□□ -0.52
CPNE1-213ENST00000434795 NEXN-AS1Q8NBZ9 246 aa11.81□□□□□ -0.52
CPNE1-213ENST00000434795 TMEM70Q9BUB7 260 aa11.81□□□□□ -0.52
CPNE1-213ENST00000434795 FAM30AQ9NZY2 134 aa11.81□□□□□ -0.52
CPNE1-213ENST00000434795 KLK12Q9UKR0 248 aa11.81□□□□□ -0.52
CPNE1-213ENST00000434795 URGCP-MRPS24S4R325 110 aa11.81□□□□□ -0.52
CPNE1-213ENST00000434795 RAB19A4D1S5 217 aa11.8□□□□□ -0.52
CPNE1-213ENST00000434795 SSTP61278 116 aa11.8□□□□□ -0.52
CPNE1-213ENST00000434795 SPANXN1Q5VSR9 72 aa11.8□□□□□ -0.52
CPNE1-213ENST00000434795 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
CPNE1-213ENST00000434795 COX11Q9Y6N1 276 aa11.8□□□□□ -0.52
CPNE1-213ENST00000434795 TRBV6-8A0A0A6YYG3 113 aa11.79□□□□□ -0.52
CPNE1-213ENST00000434795 CHCHD7Q9BUK0 85 aa11.79□□□□□ -0.52
CPNE1-213ENST00000434795 A0A087WX48 190 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 C19orf71A6NCJ1 209 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 F5H697 171 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 LECT2O14960 151 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 C1QBP02746 253 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 INAFM2P0DMQ5 153 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 HAMPP81172 84 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 ZNF56Q15929 161 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 CENPWQ5EE01 88 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 Q5VSD8 79 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 FRZBQ92765 325 aa11.78□□□□□ -0.52
CPNE1-213ENST00000434795 TEX46H3BTG2 121 aa11.77□□□□□ -0.53
CPNE1-213ENST00000434795 IGLC6P0CF74 106 aa11.77□□□□□ -0.53
CPNE1-213ENST00000434795 GZMBP10144 247 aa11.77□□□□□ -0.53
CPNE1-213ENST00000434795 ELOBQ15370 118 aa11.77□□□□□ -0.53
CPNE1-213ENST00000434795 RMI2Q96E14 147 aa11.77□□□□□ -0.53
CPNE1-213ENST00000434795 RBFOX3A6NFN3 312 aa11.76□□□□□ -0.53
CPNE1-213ENST00000434795 TMEM262E9PQX1 116 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms