RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 PHLDA3Q9Y5J5 127 aa4.97□□□□□ -1.61
GTF2A1-202ENST00000434192 TIMM8BQ9Y5J9 83 aaPredicted RBP4.97□□□□□ -1.61
GTF2A1-202ENST00000434192 DNAH9Q9NYC9 4486 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 TGIF2-C20orf24A0A0A6YYL0 155 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 IGHV3-16A0A0C4DH30 117 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 A0A1B0GW15 77 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 SNURFLB1AK76 121 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 GNRH2O43555 120 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 SPINK4O60575 86 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 S100A8P05109 93 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 ARMS2P0C7Q2 107 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 RNASE3P12724 160 aaKnown RBP4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 CACNG7P62955 275 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 HBBP68871 147 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 RIGQ13278 110 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 SPANXN1Q5VSR9 72 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 MRPL54Q6P161 138 aaKnown RBP4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 LYZL1Q6UWQ5 148 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 ZNF493Q6ZR52 646 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 ZFP82Q8N141 532 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 OR10AG1Q8NH19 301 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 RNASE8Q8TDE3 154 aaKnown RBP4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 C9orf85Q96MD7 179 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 YPEL4Q96NS1 127 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 AP1S3Q96PC3 154 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 CNFNQ9BYD5 112 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 TP53TG1Q9Y2A0 90 aa4.96□□□□□ -1.62
GTF2A1-202ENST00000434192 MUC4Q99102 2169 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 A0A1B0GXF2 115 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 SMIM9A6NGZ8 99 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 M0R381 172 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 NXPH4O95158 308 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 MT-ND6P03923 174 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 TRGC1P0CF51 173 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 COX19Q49B96 90 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 WDR73Q6P4I2 378 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 RASL11AQ6T310 242 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 C11orf72Q8NBR9 251 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 RNF183Q96D59 192 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 FAM210BQ96KR6 192 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 SPXQ9BT56 116 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 SCRT2Q9NQ03 307 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 MDFICQ9P1T7 246 aa4.95□□□□□ -1.62
GTF2A1-202ENST00000434192 MUC21A0A0G2JKD1 596 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 MUC21A0A140T8X8 626 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 M0R2P5 195 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 SPRY2O43597 315 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 IGKV2-30P06310 120 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 MIFP14174 115 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 CAMPP49913 170 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 TWIST1Q15672 202 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 DEFB121Q5J5C9 76 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 SMIM15Q7Z3B0 74 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 OR11H2Q8NH07 326 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 B9D2Q9BPU9 175 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 GSN-AS1Q9NRJ2 163 aa4.94□□□□□ -1.62
GTF2A1-202ENST00000434192 NACAE9PAV3 2078 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 IGHV4-4A0A075B6R2 117 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 IGHV4-28A0A0C4DH34 117 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 COLCA2A8K830 154 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 HLA-DQA1P01909 254 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 PRM2P04554 102 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 AZU1P20160 251 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 RAB5AP20339 215 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 NTF3P20783 257 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 RAB4BP61018 213 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 SSTP61278 116 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 DAZ2Q13117 558 aaKnown RBP4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 ZNF876PQ49A33 203 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 PIK3CD-AS1Q5SR53 167 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 GATD1Q8NB37 220 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 NDUFAF3Q9BU61 184 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 GNB1LQ9BYB4 327 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 RETNQ9HD89 108 aa4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 MRPL16Q9NX20 251 aaKnown RBP4.93□□□□□ -1.62
GTF2A1-202ENST00000434192 TRGV1A0A0A0MS02 117 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 TEX48A0A1B0GUV7 120 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 PLAC8L1A1L4L8 177 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 LYRM9A8MSI8 78 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 A8MWV9 139 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 SMIM17P0DL12 118 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 RPS10P46783 165 aaKnown RBP4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 EMP1P54849 157 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 SUMO2P61956 95 aaKnown RBP4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 LGALS9BQ3B8N2 356 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 TMEM136Q6ZRR5 245 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 SBSPONQ8IVN8 264 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 Q8NAQ8 132 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 FRZBQ92765 325 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 PTH2Q96A98 100 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 TM2D3Q9BRN9 247 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 OVOL2Q9BRP0 275 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 TMEM191AQ9H0A3 160 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 C11orf68Q9H3H3 251 aaKnown RBP4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 DPH3P1Q9H4G8 78 aa4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 NOP10Q9NPE3 64 aaKnown RBP4.92□□□□□ -1.62
GTF2A1-202ENST00000434192 KRTAP29-1A8MX34 341 aaPredicted RBP4.91□□□□□ -1.62
GTF2A1-202ENST00000434192 RHODO00212 210 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms