RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 FXYD2P54710 66 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 OR4X2Q8NGF9 303 aa6.2□□□□□ -1.42
HPS4-205ENST00000429411 A0A096LNJ9 63 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 IGKV3D-20A0A0C4DH25 116 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 F8W735 103 aaPredicted RBP6.19□□□□□ -1.42
HPS4-205ENST00000429411 OVOL3O00110 214 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 TMEM170BQ5T4T1 132 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 IL17DQ8TAD2 202 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 RPL39LQ96EH5 51 aaKnown RBP6.19□□□□□ -1.42
HPS4-205ENST00000429411 MRPS12O15235 138 aaKnown RBP6.19□□□□□ -1.42
HPS4-205ENST00000429411 GNRH2O43555 120 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 ZNF688P0C7X2 276 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 UNQ9165/PRO28630Q6UXU0 137 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 PIP4P2Q8N4L2 257 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 LY6G5BQ8NDX9 201 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 HRNRQ86YZ3 2850 aaPredicted RBP6.19□□□□□ -1.42
HPS4-205ENST00000429411 TRAV12-3A0A0B4J271 114 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 A0A1W2PPR1 153 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 C9orf118A6NHY6 69 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 CD7P09564 240 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 UBE2E1P51965 193 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 TCTEX1D4Q5JR98 221 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 FAM159AQ6UWV7 190 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 RNF183Q96D59 192 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 SPAG8Q99932 426 aaPredicted RBP6.19□□□□□ -1.42
HPS4-205ENST00000429411 SMR3AQ99954 134 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 C11orf21Q9P2W6 132 aa6.19□□□□□ -1.42
HPS4-205ENST00000429411 SCGB1C2P0DMR2 95 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 ZNF56Q15929 161 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 LINC00477Q96M19 166 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 CCDC140Q96MF4 163 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 TINCRA0A1B0GVN0 87 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 BLCAPP62952 87 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 ANXA2RQ3ZCQ2 193 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 ODF3BA8MYP8 253 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 ZNF493Q6ZR52 646 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 ZNF418Q8TF45 676 aaPredicted RBP6.18□□□□□ -1.42
HPS4-205ENST00000429411 ANAPC13Q9BS18 74 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 NPFFR1Q9GZQ6 430 aa6.18□□□□□ -1.42
HPS4-205ENST00000429411 TRBV25-1A0A075B6N4 114 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 TRAV12-2A0A075B6T6 113 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 RHPN1-AS1Q9BWJ2 59 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 MOB4Q9Y3A3 225 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 IGHV3-73A0A0B4J1V6 119 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 TRAV21A0A0B4J279 112 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 OOSP1A8MZH6 123 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 H3BRM9 83 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 IGLC6P0CF74 106 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 MALP21145 153 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 Q8N8P6 123 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 WFDC11Q8NEX6 87 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 KIR2DL5BQ8NHK3 375 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 RNF185Q96GF1 192 aa6.17□□□□□ -1.42
HPS4-205ENST00000429411 MRPL16Q9NX20 251 aaKnown RBP6.17□□□□□ -1.42
HPS4-205ENST00000429411 ZNF815PA8K554 130 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 Q1RN00 199 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 C6orf226Q5I0X4 101 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 NF1P21359 2839 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 TRBV7-1A0A0A6YYK4 115 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 A0A1W2PPM0 123 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 H3BMG7 143 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 IGHV4-38-2P0DP08 117 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 PSMG4Q5JS54 123 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 C11orf44Q8N8P7 122 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 JPT2Q9H910 190 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 RPL35AP18077 110 aaKnown RBP6.16□□□□□ -1.42
HPS4-205ENST00000429411 CUBNO60494 3623 aa6.16□□□□□ -1.42
HPS4-205ENST00000429411 PDZD2O15018 2839 aa6.15□□□□□ -1.42
HPS4-205ENST00000429411 A0A1B0GWB2 263 aa6.15□□□□□ -1.42
HPS4-205ENST00000429411 RNF223E7ERA6 249 aa6.15□□□□□ -1.42
HPS4-205ENST00000429411 K7EP34 96 aa6.15□□□□□ -1.42
HPS4-205ENST00000429411 SUMO2P61956 95 aaKnown RBP6.15□□□□□ -1.42
HPS4-205ENST00000429411 ETDBQ3ZM63 59 aa6.15□□□□□ -1.42
HPS4-205ENST00000429411 C2orf66Q6UXQ4 117 aa6.15□□□□□ -1.42
HPS4-205ENST00000429411 TRBV6-1A0A0K0K1D8 114 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 IGHG4P01861 327 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 PRR9Q5T870 116 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 C9orf139Q6ZV77 190 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 OR13C6PQ8NH95 151 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 Q96MF0 132 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 SMIM2Q9BVW6 85 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 ZFAND3Q9H8U3 227 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 IGHV4-61A0A0C4DH41 118 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 KLHL30-AS1Q8NEE0 82 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 KIR2DL4Q99706 377 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 DPH3P1Q9H4G8 78 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 KLK9Q9UKQ9 250 aa6.15□□□□□ -1.43
HPS4-205ENST00000429411 IGHV3OR16-12A0A075B7B8 117 aa6.14□□□□□ -1.43
HPS4-205ENST00000429411 J3QR89 54 aa6.14□□□□□ -1.43
HPS4-205ENST00000429411 SLC25A16P16260 332 aa6.14□□□□□ -1.43
HPS4-205ENST00000429411 PSMB2P49721 201 aa6.14□□□□□ -1.43
HPS4-205ENST00000429411 ADAMTSL5Q6ZMM2 481 aa6.14□□□□□ -1.43
HPS4-205ENST00000429411 SH2D6Q7Z4S9 175 aa6.14□□□□□ -1.43
HPS4-205ENST00000429411 MAPKAPK5-AS1Q8N8E1 139 aa6.14□□□□□ -1.43
HPS4-205ENST00000429411 C20orf173Q96LM9 149 aa6.14□□□□□ -1.43
HPS4-205ENST00000429411 PRSS2P07478 247 aa6.14□□□□□ -1.43
HPS4-205ENST00000429411 TRAV8-2A0A0B4J237 113 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 TEX48A0A1B0GUV7 120 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 H7C1H1 209 aa6.13□□□□□ -1.43
HPS4-205ENST00000429411 FGF6P10767 208 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms