RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 CIDEAO60543 219 aa8.72□□□□□ -1.01
VEGFB-202ENST00000426086 CXorf1O96002 111 aa8.72□□□□□ -1.01
VEGFB-202ENST00000426086 SULT1A2P50226 295 aa8.72□□□□□ -1.01
VEGFB-202ENST00000426086 NKX2-5P52952 324 aaPredicted RBP8.72□□□□□ -1.01
VEGFB-202ENST00000426086 NIT1Q86X76 327 aa8.72□□□□□ -1.01
VEGFB-202ENST00000426086 ARL6IP6Q8N6S5 226 aa8.72□□□□□ -1.01
VEGFB-202ENST00000426086 C14orf178Q8N769 122 aaPredicted RBP8.72□□□□□ -1.01
VEGFB-202ENST00000426086 CYB561D1Q8N8Q1 229 aa8.72□□□□□ -1.01
VEGFB-202ENST00000426086 UBE2WQ96B02 151 aa8.72□□□□□ -1.01
VEGFB-202ENST00000426086 PARLQ9H300 379 aa8.72□□□□□ -1.01
VEGFB-202ENST00000426086 JPT2Q9H910 190 aa8.72□□□□□ -1.01
VEGFB-202ENST00000426086 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.72□□□□□ -1.01
VEGFB-202ENST00000426086 ASIPP42127 132 aa8.71□□□□□ -1.02
VEGFB-202ENST00000426086 ZNF726P1Q15940 193 aa8.71□□□□□ -1.02
VEGFB-202ENST00000426086 ATRAIDQ6UW56 229 aa8.71□□□□□ -1.02
VEGFB-202ENST00000426086 RMI2Q96E14 147 aa8.71□□□□□ -1.02
VEGFB-202ENST00000426086 LINC00479Q96M42 142 aa8.71□□□□□ -1.02
VEGFB-202ENST00000426086 OTORQ9NRC9 128 aa8.71□□□□□ -1.02
VEGFB-202ENST00000426086 TMEM167BQ9NRX6 74 aa8.71□□□□□ -1.02
VEGFB-202ENST00000426086 TRAV1-1A0A0B4J248 108 aa8.69□□□□□ -1.02
VEGFB-202ENST00000426086 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
VEGFB-202ENST00000426086 GCHFRP30047 84 aa8.69□□□□□ -1.02
VEGFB-202ENST00000426086 UFSP1Q6NVU6 142 aa8.69□□□□□ -1.02
VEGFB-202ENST00000426086 CMTM2Q8TAZ6 248 aa8.69□□□□□ -1.02
VEGFB-202ENST00000426086 PTH2Q96A98 100 aa8.69□□□□□ -1.02
VEGFB-202ENST00000426086 RNF213Q63HN8 5207 aa8.69□□□□□ -1.02
VEGFB-202ENST00000426086 A0A1W2PRE2 83 aa8.68□□□□□ -1.02
VEGFB-202ENST00000426086 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
VEGFB-202ENST00000426086 FHITP49789 147 aa8.68□□□□□ -1.02
VEGFB-202ENST00000426086 Q6ZRU5 148 aa8.68□□□□□ -1.02
VEGFB-202ENST00000426086 NKX6-2Q9C056 277 aaPredicted RBP8.68□□□□□ -1.02
VEGFB-202ENST00000426086 A0A087WWC5 75 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 MAP1LC3B2A6NCE7 125 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 HMGB3O15347 200 aaKnown RBP8.67□□□□□ -1.02
VEGFB-202ENST00000426086 GCGP01275 180 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 PRSS1P07477 247 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 FAM74A1Q5RGS3 127 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 ENHOQ6UWT2 76 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 ZFP2Q6ZN57 461 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 MAP1LC3BQ9GZQ8 125 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 URGCP-MRPS24S4R325 110 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 ARL2-SNX15V9GYD0 113 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 LRP2P98164 4655 aa8.67□□□□□ -1.02
VEGFB-202ENST00000426086 USP17L23D6RBM5 183 aa8.66□□□□□ -1.02
VEGFB-202ENST00000426086 TEX46H3BTG2 121 aa8.66□□□□□ -1.02
VEGFB-202ENST00000426086 BLOC1S1P78537 153 aa8.66□□□□□ -1.02
VEGFB-202ENST00000426086 FAM213BQ8TBF2 198 aa8.66□□□□□ -1.02
VEGFB-202ENST00000426086 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.02
VEGFB-202ENST00000426086 TEX261Q6UWH6 196 aa8.65□□□□□ -1.02
VEGFB-202ENST00000426086 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.02
VEGFB-202ENST00000426086 LYPD6BQ8NI32 183 aa8.65□□□□□ -1.02
VEGFB-202ENST00000426086 A8MWV9 139 aa8.64□□□□□ -1.03
VEGFB-202ENST00000426086 C14orf177Q52M58 125 aa8.64□□□□□ -1.03
VEGFB-202ENST00000426086 ALKAL2Q6UX46 152 aa8.64□□□□□ -1.03
VEGFB-202ENST00000426086 SDIM1Q6ZPB5 146 aa8.64□□□□□ -1.03
VEGFB-202ENST00000426086 PSG8Q9UQ74 426 aa8.64□□□□□ -1.03
VEGFB-202ENST00000426086 A0A087WX48 190 aa8.63□□□□□ -1.03
VEGFB-202ENST00000426086 SERTM2A0A1B0GWG4 89 aa8.63□□□□□ -1.03
VEGFB-202ENST00000426086 FAM74A7A6NL05 159 aa8.63□□□□□ -1.03
VEGFB-202ENST00000426086 FGF8P55075 233 aaPredicted RBP8.63□□□□□ -1.03
VEGFB-202ENST00000426086 SUMO1P63165 101 aaKnown RBP8.63□□□□□ -1.03
VEGFB-202ENST00000426086 DMRTA1Q5VZB9 504 aa8.63□□□□□ -1.03
VEGFB-202ENST00000426086 C5orf17Q8NAS9 161 aa8.63□□□□□ -1.03
VEGFB-202ENST00000426086 TCEAL7Q9BRU2 100 aa8.63□□□□□ -1.03
VEGFB-202ENST00000426086 NDFIP1Q9BT67 221 aa8.63□□□□□ -1.03
VEGFB-202ENST00000426086 C1orf43Q9BWL3 253 aa8.63□□□□□ -1.03
VEGFB-202ENST00000426086 IFNA7P01567 189 aa8.62□□□□□ -1.03
VEGFB-202ENST00000426086 HLA-DQA1P01909 254 aa8.62□□□□□ -1.03
VEGFB-202ENST00000426086 TCRAP04437 139 aa8.62□□□□□ -1.03
VEGFB-202ENST00000426086 Q0VG73 95 aa8.62□□□□□ -1.03
VEGFB-202ENST00000426086 C15orf54Q8N8G6 183 aa8.62□□□□□ -1.03
VEGFB-202ENST00000426086 CHCHD7Q9BUK0 85 aa8.62□□□□□ -1.03
VEGFB-202ENST00000426086 EPDR1Q9UM22 224 aa8.62□□□□□ -1.03
VEGFB-202ENST00000426086 TAGLN2P37802 199 aaKnown RBP8.61□□□□□ -1.03
VEGFB-202ENST00000426086 CCL20P78556 96 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 ELOBQ15370 118 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 SMUG1Q53HV7 270 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 MPV17L2Q567V2 206 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 FAM74A4Q5TZK3 123 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 KRTAP26-1Q6PEX3 210 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 PRNTQ86SH4 94 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 HIST1H2BAQ96A08 127 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 MANBALQ9NQG1 85 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 TNXBP22105 4242 aa8.61□□□□□ -1.03
VEGFB-202ENST00000426086 A0A087WWL8 130 aa8.6□□□□□ -1.03
VEGFB-202ENST00000426086 FLI1Q01543 452 aaPredicted RBP8.6□□□□□ -1.03
VEGFB-202ENST00000426086 CIRBPQ14011 172 aaKnown RBP8.6□□□□□ -1.03
VEGFB-202ENST00000426086 PIK3CD-AS1Q5SR53 167 aa8.6□□□□□ -1.03
VEGFB-202ENST00000426086 DGAT2L7PQ6IED9 249 aa8.6□□□□□ -1.03
VEGFB-202ENST00000426086 TMEM262E9PQX1 116 aa8.59□□□□□ -1.03
VEGFB-202ENST00000426086 H3BVH4 76 aa8.59□□□□□ -1.03
VEGFB-202ENST00000426086 K7EQM0 130 aa8.59□□□□□ -1.03
VEGFB-202ENST00000426086 PAGE4O60829 102 aa8.59□□□□□ -1.03
VEGFB-202ENST00000426086 NDUFS6O75380 124 aaKnown RBP8.59□□□□□ -1.03
VEGFB-202ENST00000426086 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
VEGFB-202ENST00000426086 S100A4P26447 101 aaKnown RBP8.59□□□□□ -1.03
VEGFB-202ENST00000426086 UBE2D3P61077 147 aa8.59□□□□□ -1.03
VEGFB-202ENST00000426086 UBE2D2P62837 147 aa8.59□□□□□ -1.03
VEGFB-202ENST00000426086 ZC2HC1AQ96GY0 325 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms