RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CDX4O14627 284 aaPredicted RBP1.86□□□□□ -2.11
VPS41-206ENST00000418457 MRPS12O15235 138 aaKnown RBP1.86□□□□□ -2.11
VPS41-206ENST00000418457 SNAI2O43623 268 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 ENSAO43768 121 aaKnown RBP1.86□□□□□ -2.11
VPS41-206ENST00000418457 PPP1R17O96001 155 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 NPYP01303 97 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 IGKV1-17P01599 117 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 IL4P05112 153 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 IGHV1-8P0DP01 117 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 CD24P25063 80 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 COL8A2P25067 703 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 LEPP41159 167 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 ASIPP42127 132 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 CRIP1P50238 77 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 CRYBA4P53673 196 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 DLX6P56179 175 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 HERVK_113P61574 105 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 LOXL1Q08397 574 aaPredicted RBP1.86□□□□□ -2.11
VPS41-206ENST00000418457 LAGE3Q14657 143 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 C5orf64Q2M2E5 130 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 TMEM155Q4W5P6 130 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 ORMDL2Q53FV1 153 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 C10orf55Q5SWW7 151 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 CFAP126Q5VTH2 177 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 HCP5Q6MZN7 132 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 PCP2Q8IVA1 136 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 EXOC3-AS1Q8N2X6 119 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 C14orf178Q8N769 122 aaPredicted RBP1.86□□□□□ -2.11
VPS41-206ENST00000418457 TMEM105Q8N8V8 129 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 PPDPFLQ8WWR9 84 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 TMEM158Q8WZ71 300 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 RPEQ96AT9 228 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 HIST1H4GQ99525 98 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 FOXC2Q99958 501 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 SLC50A1Q9BRV3 221 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 GEMIN7Q9H840 131 aaKnown RBP1.86□□□□□ -2.11
VPS41-206ENST00000418457 ZNF702PQ9H963 129 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 MRPL36Q9P0J6 103 aaKnown RBP1.86□□□□□ -2.11
VPS41-206ENST00000418457 LENEPQ9Y5L5 61 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 PRRC2AP48634 2157 aaKnown RBP1.86□□□□□ -2.11
VPS41-206ENST00000418457 CACNA1AO00555 2505 aa1.86□□□□□ -2.11
VPS41-206ENST00000418457 ZNF292O60281 2723 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 TECTAO75443 2155 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 IGLV2-18A0A075B6J9 118 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 IGKV2D-26A0A0A0MRZ7 120 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 IGHV1-69DA0A0B4J2H0 117 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 IGHV1-3A0A0C4DH29 117 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 OOSP1A8MZH6 123 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 BUB1B-PAK6H3BSN5 160 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 K7EIM0 57 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 M0R381 172 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 NBR2O15453 112 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 FCN3O75636 299 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 NDUFA3O95167 84 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 CNIH1O95406 144 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 TSPAN13O95857 204 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 IGLV1-47P01700 117 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 IGHV3-23P01764 117 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 ORM1P02763 201 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 SPINK8P0C7L1 97 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 CCL3L1P16619 93 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 LOXP28300 417 aaPredicted RBP1.85□□□□□ -2.11
VPS41-206ENST00000418457 WFDC2Q14508 124 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 MRPL23Q16540 153 aaKnown RBP1.85□□□□□ -2.11
VPS41-206ENST00000418457 ETDBQ3ZM63 59 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 FAM201AQ5SY85 155 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 Q6Q795 121 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 DUX4L9Q6RFH8 374 aaPredicted RBP1.85□□□□□ -2.11
VPS41-206ENST00000418457 TEN1Q86WV5 123 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 LRRC75A-AS1Q8N1F1 130 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 DEFB108BQ8NET1 73 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 NPBQ8NG41 125 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 LINC01006Q8NI28 216 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 TOMM6Q96B49 74 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 RNF185Q96GF1 192 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 C18orf15Q96N68 181 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 C20orf78Q9BR46 151 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 NAA38Q9BRA0 125 aaKnown RBP1.85□□□□□ -2.11
VPS41-206ENST00000418457 MRPL35Q9NZE8 188 aaKnown RBP1.85□□□□□ -2.11
VPS41-206ENST00000418457 PRO0461Q9UI25 63 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 ERG28Q9UKR5 140 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 NAV3Q8IVL0 2385 aa1.85□□□□□ -2.11
VPS41-206ENST00000418457 PIEZO1Q92508 2521 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 SPENQ96T58 3664 aaKnown RBP1.84□□□□□ -2.11
VPS41-206ENST00000418457 INTS1Q8N201 2190 aaKnown RBP1.84□□□□□ -2.11
VPS41-206ENST00000418457 MED13Q9UHV7 2174 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 CELSR3Q9NYQ7 3312 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 IGLV11-55A0A075B6I3 123 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 TRAV26-1A0A087WT03 109 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 IGKV2-40A0A087WW87 121 aaPredicted RBP1.84□□□□□ -2.11
VPS41-206ENST00000418457 TMSB15BA0A087X1C1 80 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 TRAV40A0A0B4J280 105 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 CENPVL3A0A0U1RRI6 287 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 A8MWV9 139 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 H0Y9J4 135 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 K7ERJ3 54 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 M0R3E3 92 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 IGKV2D-40P01614 121 aaPredicted RBP1.84□□□□□ -2.11
VPS41-206ENST00000418457 IGHV3-48P01763 117 aa1.84□□□□□ -2.11
VPS41-206ENST00000418457 IGHG4P01861 327 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms