RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 IL36BQ9NZH7 164 aa12.65□□□□□ -0.38
UBXN4-202ENST00000415164 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
UBXN4-202ENST00000415164 TMEM262E9PQX1 116 aa12.64□□□□□ -0.39
UBXN4-202ENST00000415164 M0R381 172 aa12.64□□□□□ -0.39
UBXN4-202ENST00000415164 ARMS2P0C7Q2 107 aa12.64□□□□□ -0.39
UBXN4-202ENST00000415164 ELOBQ15370 118 aa12.64□□□□□ -0.39
UBXN4-202ENST00000415164 PIK3CD-AS1Q5SR53 167 aa12.64□□□□□ -0.39
UBXN4-202ENST00000415164 UFSP1Q6NVU6 142 aa12.64□□□□□ -0.39
UBXN4-202ENST00000415164 Q86TA4 180 aa12.63□□□□□ -0.39
UBXN4-202ENST00000415164 PHLDA3Q9Y5J5 127 aa12.63□□□□□ -0.39
UBXN4-202ENST00000415164 UBR4Q5T4S7 5183 aa12.62□□□□□ -0.39
UBXN4-202ENST00000415164 A0A1W2PRE2 83 aa12.62□□□□□ -0.39
UBXN4-202ENST00000415164 PEX7O00628 323 aa12.62□□□□□ -0.39
UBXN4-202ENST00000415164 SERF2P84101 59 aa12.62□□□□□ -0.39
UBXN4-202ENST00000415164 KRBOX1C9JBD0 128 aa12.61□□□□□ -0.39
UBXN4-202ENST00000415164 SH2D1AO60880 128 aa12.61□□□□□ -0.39
UBXN4-202ENST00000415164 CRPP02741 224 aa12.61□□□□□ -0.39
UBXN4-202ENST00000415164 TPT1P13693 172 aaKnown RBP12.61□□□□□ -0.39
UBXN4-202ENST00000415164 ZC2HC1AQ96GY0 325 aa12.61□□□□□ -0.39
UBXN4-202ENST00000415164 C1orf43Q9BWL3 253 aa12.61□□□□□ -0.39
UBXN4-202ENST00000415164 PKHD1L1Q86WI1 4243 aa12.61□□□□□ -0.39
UBXN4-202ENST00000415164 RPL36AP83881 106 aaKnown RBP12.6□□□□□ -0.39
UBXN4-202ENST00000415164 RPL36ALQ969Q0 106 aaKnown RBP12.6□□□□□ -0.39
UBXN4-202ENST00000415164 TNFSF18Q9UNG2 199 aa12.6□□□□□ -0.39
UBXN4-202ENST00000415164 ALG5Q9Y673 324 aa12.6□□□□□ -0.39
UBXN4-202ENST00000415164 OXTP01178 125 aa12.59□□□□□ -0.39
UBXN4-202ENST00000415164 KRTAP10-4P60372 401 aaPredicted RBP12.59□□□□□ -0.39
UBXN4-202ENST00000415164 C14orf177Q52M58 125 aa12.59□□□□□ -0.39
UBXN4-202ENST00000415164 C15orf54Q8N8G6 183 aa12.59□□□□□ -0.39
UBXN4-202ENST00000415164 SFRP2Q96HF1 295 aa12.59□□□□□ -0.39
UBXN4-202ENST00000415164 AQP10Q96PS8 301 aa12.59□□□□□ -0.39
UBXN4-202ENST00000415164 PLA2G2DQ9UNK4 145 aa12.59□□□□□ -0.39
UBXN4-202ENST00000415164 HLA-DQA1P01909 254 aa12.58□□□□□ -0.4
UBXN4-202ENST00000415164 CRIP1P50238 77 aa12.58□□□□□ -0.4
UBXN4-202ENST00000415164 RPL37AP61513 92 aaKnown RBP12.58□□□□□ -0.4
UBXN4-202ENST00000415164 UBE2G1P62253 170 aa12.58□□□□□ -0.4
UBXN4-202ENST00000415164 Q0VG73 95 aa12.58□□□□□ -0.4
UBXN4-202ENST00000415164 FAM162BQ5T6X4 162 aa12.58□□□□□ -0.4
UBXN4-202ENST00000415164 CHCHD7Q9BUK0 85 aa12.58□□□□□ -0.4
UBXN4-202ENST00000415164 ZFP82Q8N141 532 aa12.57□□□□□ -0.4
UBXN4-202ENST00000415164 CTXND1A0A1B0GTU2 59 aa12.56□□□□□ -0.4
UBXN4-202ENST00000415164 ANGP03950 147 aaKnown RBP12.56□□□□□ -0.4
UBXN4-202ENST00000415164 ZNF56Q15929 161 aa12.56□□□□□ -0.4
UBXN4-202ENST00000415164 ZNF726P1Q15940 193 aa12.56□□□□□ -0.4
UBXN4-202ENST00000415164 RPL7L1Q6DKI1 246 aaKnown RBP12.56□□□□□ -0.4
UBXN4-202ENST00000415164 HIST1H2BAQ96A08 127 aa12.56□□□□□ -0.4
UBXN4-202ENST00000415164 TRBV7-3A0A075B6L6 115 aa12.55□□□□□ -0.4
UBXN4-202ENST00000415164 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
UBXN4-202ENST00000415164 TRBV10-1A0A0K0K1A3 114 aa12.55□□□□□ -0.4
UBXN4-202ENST00000415164 FAM74A7A6NL05 159 aa12.55□□□□□ -0.4
UBXN4-202ENST00000415164 UBE2D3P61077 147 aa12.55□□□□□ -0.4
UBXN4-202ENST00000415164 UBE2D2P62837 147 aa12.55□□□□□ -0.4
UBXN4-202ENST00000415164 DNLZQ5SXM8 178 aa12.55□□□□□ -0.4
UBXN4-202ENST00000415164 USP17L23D6RBM5 183 aa12.54□□□□□ -0.4
UBXN4-202ENST00000415164 MPV17L2Q567V2 206 aa12.54□□□□□ -0.4
UBXN4-202ENST00000415164 AKR1C8PQ5T2L2 129 aa12.54□□□□□ -0.4
UBXN4-202ENST00000415164 ATRAIDQ6UW56 229 aa12.54□□□□□ -0.4
UBXN4-202ENST00000415164 ENHOQ6UWT2 76 aa12.54□□□□□ -0.4
UBXN4-202ENST00000415164 INO80EQ8NBZ0 244 aaPredicted RBP12.54□□□□□ -0.4
UBXN4-202ENST00000415164 CHCHD5Q9BSY4 110 aa12.54□□□□□ -0.4
UBXN4-202ENST00000415164 MED28Q9H204 178 aa12.54□□□□□ -0.4
UBXN4-202ENST00000415164 ZFP30Q9Y2G7 519 aa12.54□□□□□ -0.4
UBXN4-202ENST00000415164 TRBV6-8A0A0A6YYG3 113 aa12.53□□□□□ -0.4
UBXN4-202ENST00000415164 Q5BKY6 102 aa12.53□□□□□ -0.4
UBXN4-202ENST00000415164 CLPSL2Q6UWE3 100 aa12.53□□□□□ -0.4
UBXN4-202ENST00000415164 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
UBXN4-202ENST00000415164 FXYD6-FXYD2A0A087WZ82 144 aa12.52□□□□□ -0.41
UBXN4-202ENST00000415164 PTTG1O95997 202 aa12.52□□□□□ -0.41
UBXN4-202ENST00000415164 LINC01559Q495D7 138 aa12.52□□□□□ -0.41
UBXN4-202ENST00000415164 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.52□□□□□ -0.41
UBXN4-202ENST00000415164 NKX6-2Q9C056 277 aaPredicted RBP12.52□□□□□ -0.41
UBXN4-202ENST00000415164 SSTP61278 116 aa12.51□□□□□ -0.41
UBXN4-202ENST00000415164 CST9LP1Q5W188 147 aa12.51□□□□□ -0.41
UBXN4-202ENST00000415164 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
UBXN4-202ENST00000415164 A6NHS1 94 aa12.5□□□□□ -0.41
UBXN4-202ENST00000415164 F5H697 171 aa12.5□□□□□ -0.41
UBXN4-202ENST00000415164 AKR1C3P42330 323 aa12.5□□□□□ -0.41
UBXN4-202ENST00000415164 ZNF674Q2M3X9 581 aa12.5□□□□□ -0.41
UBXN4-202ENST00000415164 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
UBXN4-202ENST00000415164 STOML3Q8TAV4 291 aa12.5□□□□□ -0.41
UBXN4-202ENST00000415164 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
UBXN4-202ENST00000415164 MUC21A0A0G2JKD1 596 aa12.49□□□□□ -0.41
UBXN4-202ENST00000415164 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
UBXN4-202ENST00000415164 PRSS1P07477 247 aa12.49□□□□□ -0.41
UBXN4-202ENST00000415164 HNRNPA3P51991 378 aaKnown RBP12.49□□□□□ -0.41
UBXN4-202ENST00000415164 RAB4BP61018 213 aa12.49□□□□□ -0.41
UBXN4-202ENST00000415164 RPL19P84098 196 aaKnown RBP12.49□□□□□ -0.41
UBXN4-202ENST00000415164 OR10G8Q8NGN5 311 aa12.49□□□□□ -0.41
UBXN4-202ENST00000415164 LTAP01374 205 aa12.47□□□□□ -0.41
UBXN4-202ENST00000415164 GAGE6Q13070 117 aa12.47□□□□□ -0.41
UBXN4-202ENST00000415164 MIAQ16674 131 aa12.47□□□□□ -0.41
UBXN4-202ENST00000415164 COX8CQ7Z4L0 72 aa12.47□□□□□ -0.41
UBXN4-202ENST00000415164 OR10AG1Q8NH19 301 aa12.47□□□□□ -0.41
UBXN4-202ENST00000415164 DAZAP1Q96EP5 407 aaKnown RBP12.47□□□□□ -0.41
UBXN4-202ENST00000415164 PKIAP61925 76 aa12.46□□□□□ -0.41
UBXN4-202ENST00000415164 SPANXN1Q5VSR9 72 aa12.46□□□□□ -0.41
UBXN4-202ENST00000415164 ZNF471Q9BX82 626 aaPredicted RBP12.46□□□□□ -0.41
UBXN4-202ENST00000415164 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.46□□□□□ -0.41
UBXN4-202ENST00000415164 GIPP09681 153 aaPredicted RBP12.45□□□□□ -0.42
UBXN4-202ENST00000415164 A0A1B0GV50 99 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms