RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
ATG4B-207ENST00000415107 RHOHQ15669 191 aa8.31□□□□□ -1.08
ATG4B-207ENST00000415107 LYZL1Q6UWQ5 148 aa8.31□□□□□ -1.08
ATG4B-207ENST00000415107 LINC00476Q8WZB0 136 aa8.31□□□□□ -1.08
ATG4B-207ENST00000415107 LCE6AA0A183 80 aa8.3□□□□□ -1.08
ATG4B-207ENST00000415107 SMIM27A0A1W2PRY6 76 aa8.3□□□□□ -1.08
ATG4B-207ENST00000415107 PPP1R2P9O14990 202 aa8.3□□□□□ -1.08
ATG4B-207ENST00000415107 PAX4O43316 350 aa8.3□□□□□ -1.08
ATG4B-207ENST00000415107 TRGC1P0CF51 173 aa8.3□□□□□ -1.08
ATG4B-207ENST00000415107 P0DMU3 169 aa8.3□□□□□ -1.08
ATG4B-207ENST00000415107 FAM231AP0DMU4 169 aa8.3□□□□□ -1.08
ATG4B-207ENST00000415107 FAM231CP0DMU5 169 aa8.3□□□□□ -1.08
ATG4B-207ENST00000415107 CARHSP1Q9Y2V2 147 aaKnown RBP8.3□□□□□ -1.08
ATG4B-207ENST00000415107 KIF25-AS1Q9Y6Z4 181 aa8.3□□□□□ -1.08
ATG4B-207ENST00000415107 VPS13DQ5THJ4 4388 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 A0A096LPF7 62 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 HIGD1CA8MV81 97 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 F8W036 122 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 FAM3BP58499 235 aaPredicted RBP8.29□□□□□ -1.08
ATG4B-207ENST00000415107 MRPL23Q16540 153 aaKnown RBP8.29□□□□□ -1.08
ATG4B-207ENST00000415107 RNF212Q495C1 297 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 SH2D6Q7Z4S9 175 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 SLC25A29Q8N8R3 303 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 ANAPC16Q96DE5 110 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 SAMD10Q9BYL1 202 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 JPT2Q9H910 190 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 ICOSQ9Y6W8 199 aa8.29□□□□□ -1.08
ATG4B-207ENST00000415107 TRBV10-1A0A0K0K1A3 114 aa8.28□□□□□ -1.08
ATG4B-207ENST00000415107 K7EQD1 137 aa8.28□□□□□ -1.08
ATG4B-207ENST00000415107 LINC00694P0DN24 101 aa8.28□□□□□ -1.08
ATG4B-207ENST00000415107 NTF3P20783 257 aa8.28□□□□□ -1.08
ATG4B-207ENST00000415107 LINC00315P59091 139 aa8.28□□□□□ -1.08
ATG4B-207ENST00000415107 RAB4BP61018 213 aa8.28□□□□□ -1.08
ATG4B-207ENST00000415107 PRADC1Q9BSG0 188 aa8.28□□□□□ -1.08
ATG4B-207ENST00000415107 TPPP3Q9BW30 176 aa8.28□□□□□ -1.08
ATG4B-207ENST00000415107 NAT8BQ9UHF3 227 aa8.28□□□□□ -1.08
ATG4B-207ENST00000415107 A0A0J9YY99 117 aa8.27□□□□□ -1.09
ATG4B-207ENST00000415107 A0A1B0GUT8 65 aa8.27□□□□□ -1.09
ATG4B-207ENST00000415107 TIRAPP58753 221 aa8.27□□□□□ -1.09
ATG4B-207ENST00000415107 NUP35Q8NFH5 326 aa8.27□□□□□ -1.09
ATG4B-207ENST00000415107 FRZBQ92765 325 aa8.27□□□□□ -1.09
ATG4B-207ENST00000415107 A0A087WWL8 130 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 A0A1B0GW15 77 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 MT-ND4LP03901 98 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 SMIM17P0DL12 118 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 GYPEP15421 78 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 FAM74A4Q5TZK3 123 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 C14orf178Q8N769 122 aaPredicted RBP8.26□□□□□ -1.09
ATG4B-207ENST00000415107 BORCS7Q96B45 105 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 UPK3BQ9BT76 320 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 CTDSP1Q9GZU7 261 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 DPH3P1Q9H4G8 78 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 TMEM242Q9NWH2 141 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 MSRB1Q9NZV6 116 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 DNAH6Q9C0G6 4158 aa8.26□□□□□ -1.09
ATG4B-207ENST00000415107 IGHV3-73A0A0B4J1V6 119 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 MUC21A0A0G2JKD1 596 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 MUC21A0A140T8X8 626 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 NUDT3O95989 172 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 EVI2AP22794 236 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 SRIP30626 198 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 CCL18P55774 89 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 Q6ZSN1 163 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 NEGR1Q7Z3B1 354 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 PGLYRP4Q96LB8 373 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 IMMP2LQ96T52 175 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 TMEM191AQ9H0A3 160 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 KMT2AQ03164 3969 aa8.25□□□□□ -1.09
ATG4B-207ENST00000415107 H7C1H1 209 aa8.24□□□□□ -1.09
ATG4B-207ENST00000415107 RIGQ13278 110 aa8.24□□□□□ -1.09
ATG4B-207ENST00000415107 TWIST1Q15672 202 aa8.24□□□□□ -1.09
ATG4B-207ENST00000415107 SMIM15Q7Z3B0 74 aa8.24□□□□□ -1.09
ATG4B-207ENST00000415107 ATP5L2Q7Z4Y8 100 aa8.24□□□□□ -1.09
ATG4B-207ENST00000415107 GATD1Q8NB37 220 aa8.24□□□□□ -1.09
ATG4B-207ENST00000415107 A0A087WWC5 75 aa8.23□□□□□ -1.09
ATG4B-207ENST00000415107 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
ATG4B-207ENST00000415107 RHEBQ15382 184 aa8.23□□□□□ -1.09
ATG4B-207ENST00000415107 ZNF56Q15929 161 aa8.23□□□□□ -1.09
ATG4B-207ENST00000415107 NDUFA5Q16718 116 aa8.23□□□□□ -1.09
ATG4B-207ENST00000415107 MRPS16Q9Y3D3 137 aaKnown RBP8.23□□□□□ -1.09
ATG4B-207ENST00000415107 TRBV7-3A0A075B6L6 115 aa8.22□□□□□ -1.09
ATG4B-207ENST00000415107 TRAV9-1A0A075B6T8 112 aa8.22□□□□□ -1.09
ATG4B-207ENST00000415107 M0QY20 66 aa8.22□□□□□ -1.09
ATG4B-207ENST00000415107 S100A8P05109 93 aa8.22□□□□□ -1.09
ATG4B-207ENST00000415107 ESRGQ1W209 222 aa8.22□□□□□ -1.09
ATG4B-207ENST00000415107 DNAJC30Q96LL9 226 aa8.22□□□□□ -1.09
ATG4B-207ENST00000415107 LINC00588Q9Y4M8 146 aa8.22□□□□□ -1.09
ATG4B-207ENST00000415107 LOC100131303A0A0U1RQF7 123 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 LY6G6CO95867 125 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 UBE2D3P61077 147 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 UBE2D2P62837 147 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 RPL36AP83881 106 aaKnown RBP8.21□□□□□ -1.1
ATG4B-207ENST00000415107 SUMO4Q6EEV6 95 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 LYPD5Q6UWN5 251 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 SVBPQ8N300 66 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 ZNRF2Q8NHG8 242 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 RPL36ALQ969Q0 106 aaKnown RBP8.21□□□□□ -1.1
ATG4B-207ENST00000415107 GTSF1LQ9H1H1 148 aa8.21□□□□□ -1.1
ATG4B-207ENST00000415107 RYR2Q92736 4967 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms