RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 K7EP13 123 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 ZNF575Q86XF7 245 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 C6orf223Q8N319 242 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.12□□□□□ -0.79
CHD1-202ENST00000414220 NUDT10Q8NFP7 164 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 OR10AG1Q8NH19 301 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 ATP6V0E2Q8NHE4 81 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 NUDT11Q96G61 164 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 SMIM7Q9BQ49 75 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 SAMD10Q9BYL1 202 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 LY96Q9Y6Y9 160 aa10.12□□□□□ -0.79
CHD1-202ENST00000414220 NACAE9PAV3 2078 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 PRSS29PA6NIE9 313 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 ZNF727A8MUV8 499 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 CRYGDP07320 174 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 EVI2AP22794 236 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 RAB14P61106 215 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 SSTP61278 116 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 PEA15Q15121 130 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 AP1S3Q96PC3 154 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 SMDT1Q9H4I9 107 aa10.11□□□□□ -0.79
CHD1-202ENST00000414220 RPP21Q9H633 154 aaKnown RBP10.11□□□□□ -0.79
CHD1-202ENST00000414220 TRBV10-1A0A0K0K1A3 114 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 GAGE12JA6NER3 117 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 F5H697 171 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 RAB4BP61018 213 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 RPL36AP83881 106 aaKnown RBP10.1□□□□□ -0.79
CHD1-202ENST00000414220 GAGE1Q13065 139 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 GAGE4Q13068 117 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 GAGE5Q13069 117 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 ZNF56Q15929 161 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 GAGE13Q4V321 117 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 FAM74A3Q4VXF1 159 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 OR10J3Q5JRS4 329 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 UFSP1Q6NVU6 142 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 RPL36ALQ969Q0 106 aaKnown RBP10.1□□□□□ -0.79
CHD1-202ENST00000414220 GTSF1LQ9H1H1 148 aa10.1□□□□□ -0.79
CHD1-202ENST00000414220 GATCO43716 136 aaKnown RBP10.09□□□□□ -0.79
CHD1-202ENST00000414220 SRP19P09132 144 aaKnown RBP10.09□□□□□ -0.79
CHD1-202ENST00000414220 TRGC1P0CF51 173 aa10.09□□□□□ -0.79
CHD1-202ENST00000414220 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
CHD1-202ENST00000414220 GZMBP10144 247 aa10.09□□□□□ -0.79
CHD1-202ENST00000414220 ERVFC1-1P60608 527 aa10.09□□□□□ -0.79
CHD1-202ENST00000414220 KMT2AQ03164 3969 aa10.09□□□□□ -0.79
CHD1-202ENST00000414220 A0A087WWC5 75 aa10.08□□□□□ -0.8
CHD1-202ENST00000414220 MUC21A0A0G2JKD1 596 aa10.08□□□□□ -0.8
CHD1-202ENST00000414220 MUC21A0A140T8X8 626 aa10.08□□□□□ -0.8
CHD1-202ENST00000414220 LELP1Q5T871 98 aa10.08□□□□□ -0.8
CHD1-202ENST00000414220 WDR73Q6P4I2 378 aa10.08□□□□□ -0.8
CHD1-202ENST00000414220 Q6ZSN1 163 aa10.08□□□□□ -0.8
CHD1-202ENST00000414220 FAM231DQ6ZW35 169 aa10.08□□□□□ -0.8
CHD1-202ENST00000414220 C10orf126Q8N4M7 172 aa10.08□□□□□ -0.8
CHD1-202ENST00000414220 C14orf178Q8N769 122 aaPredicted RBP10.08□□□□□ -0.8
CHD1-202ENST00000414220 RNASE7Q9H1E1 156 aaKnown RBP10.08□□□□□ -0.8
CHD1-202ENST00000414220 A8MWL6 223 aa10.07□□□□□ -0.8
CHD1-202ENST00000414220 K7EN84 100 aa10.07□□□□□ -0.8
CHD1-202ENST00000414220 RTL8CO15255 209 aa10.07□□□□□ -0.8
CHD1-202ENST00000414220 LYZL1Q6UWQ5 148 aa10.07□□□□□ -0.8
CHD1-202ENST00000414220 SMIM15Q7Z3B0 74 aa10.07□□□□□ -0.8
CHD1-202ENST00000414220 NFE4Q86UQ8 179 aa10.07□□□□□ -0.8
CHD1-202ENST00000414220 BORCS7Q96B45 105 aa10.07□□□□□ -0.8
CHD1-202ENST00000414220 IGHV3-38A0A0C4DH36 116 aa10.06□□□□□ -0.8
CHD1-202ENST00000414220 H7C1H1 209 aa10.06□□□□□ -0.8
CHD1-202ENST00000414220 TMEM241Q24JQ0 296 aa10.06□□□□□ -0.8
CHD1-202ENST00000414220 C15orf54Q8N8G6 183 aa10.06□□□□□ -0.8
CHD1-202ENST00000414220 DNAH6Q9C0G6 4158 aa10.06□□□□□ -0.8
CHD1-202ENST00000414220 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
CHD1-202ENST00000414220 DNAH10OSP0CZ25 163 aa10.05□□□□□ -0.8
CHD1-202ENST00000414220 NTF3P20783 257 aa10.05□□□□□ -0.8
CHD1-202ENST00000414220 TWIST1Q15672 202 aa10.05□□□□□ -0.8
CHD1-202ENST00000414220 CT83Q5H943 113 aa10.05□□□□□ -0.8
CHD1-202ENST00000414220 LINC01551Q86U37 167 aa10.05□□□□□ -0.8
CHD1-202ENST00000414220 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
CHD1-202ENST00000414220 MGPP08493 103 aa10.04□□□□□ -0.8
CHD1-202ENST00000414220 KCNIP4Q6PIL6 250 aa10.04□□□□□ -0.8
CHD1-202ENST00000414220 DPH3P1Q9H4G8 78 aa10.04□□□□□ -0.8
CHD1-202ENST00000414220 CTRLP40313 264 aa10.03□□□□□ -0.8
CHD1-202ENST00000414220 LINC01556Q5JQF7 62 aa10.03□□□□□ -0.8
CHD1-202ENST00000414220 OR10G8Q8NGN5 311 aa10.03□□□□□ -0.8
CHD1-202ENST00000414220 OSTCQ9NRP0 149 aa10.03□□□□□ -0.8
CHD1-202ENST00000414220 NAT8Q9UHE5 227 aa10.03□□□□□ -0.8
CHD1-202ENST00000414220 URGCP-MRPS24S4R325 110 aa10.03□□□□□ -0.8
CHD1-202ENST00000414220 LINC00694P0DN24 101 aa10.02□□□□□ -0.81
CHD1-202ENST00000414220 LINC00315P59091 139 aa10.02□□□□□ -0.81
CHD1-202ENST00000414220 TMEM97Q5BJF2 176 aa10.02□□□□□ -0.81
CHD1-202ENST00000414220 DNAJC30Q96LL9 226 aa10.02□□□□□ -0.81
CHD1-202ENST00000414220 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
CHD1-202ENST00000414220 FAM231BA6NCW3 169 aa10.01□□□□□ -0.81
CHD1-202ENST00000414220 UBE2D3P61077 147 aa10.01□□□□□ -0.81
CHD1-202ENST00000414220 UBE2D2P62837 147 aa10.01□□□□□ -0.81
CHD1-202ENST00000414220 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
CHD1-202ENST00000414220 KRTAP1-5Q9BYS1 174 aa10.01□□□□□ -0.81
CHD1-202ENST00000414220 GFRA4Q9GZZ7 299 aa10.01□□□□□ -0.81
CHD1-202ENST00000414220 MSRB1Q9NZV6 116 aa10.01□□□□□ -0.81
CHD1-202ENST00000414220 KIF25-AS1Q9Y6Z4 181 aa10.01□□□□□ -0.81
CHD1-202ENST00000414220 EREGO14944 169 aa10□□□□□ -0.81
CHD1-202ENST00000414220 FOXA3P55318 350 aaPredicted RBP10□□□□□ -0.81
CHD1-202ENST00000414220 ADIRFQ15847 76 aa10□□□□□ -0.81
CHD1-202ENST00000414220 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
CHD1-202ENST00000414220 NEXN-AS1Q8NBZ9 246 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms