RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TMEM170BQ5T4T1 132 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 Q6ZS46 218 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 M0QXV9 152 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 IGHV1-69P01742 117 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 SPINK8P0C7L1 97 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 SFTA2Q6UW10 78 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 ZNRF2Q8NHG8 242 aa13.19□□□□□ -0.3
SDCBP-202ENST00000413219 Q6ZUT4 128 aa13.18□□□□□ -0.3
SDCBP-202ENST00000413219 UBTD1Q9HAC8 227 aa13.18□□□□□ -0.3
SDCBP-202ENST00000413219 IGHG2P01859 326 aa13.17□□□□□ -0.3
SDCBP-202ENST00000413219 LGALS3P17931 250 aaKnown RBP13.17□□□□□ -0.3
SDCBP-202ENST00000413219 ID1P41134 155 aa13.17□□□□□ -0.3
SDCBP-202ENST00000413219 RHOHQ15669 191 aa13.17□□□□□ -0.3
SDCBP-202ENST00000413219 PTH2Q96A98 100 aa13.17□□□□□ -0.3
SDCBP-202ENST00000413219 FHL3Q13643 280 aa13.17□□□□□ -0.3
SDCBP-202ENST00000413219 JPT2Q9H910 190 aa13.17□□□□□ -0.3
SDCBP-202ENST00000413219 DAZ1Q9NQZ3 744 aaKnown RBP13.17□□□□□ -0.3
SDCBP-202ENST00000413219 F5H697 171 aa13.16□□□□□ -0.3
SDCBP-202ENST00000413219 LEPROTO15243 131 aa13.16□□□□□ -0.3
SDCBP-202ENST00000413219 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
SDCBP-202ENST00000413219 HRNRQ86YZ3 2850 aaPredicted RBP13.16□□□□□ -0.3
SDCBP-202ENST00000413219 MUC4Q99102 2169 aa13.16□□□□□ -0.3
SDCBP-202ENST00000413219 RIF1Q5UIP0 2472 aaKnown RBP13.16□□□□□ -0.3
SDCBP-202ENST00000413219 A0A087WWL8 130 aa13.15□□□□□ -0.3
SDCBP-202ENST00000413219 K7EMT4 169 aa13.15□□□□□ -0.3
SDCBP-202ENST00000413219 IGHV3-11P01762 117 aa13.15□□□□□ -0.3
SDCBP-202ENST00000413219 MT-ATP8P03928 68 aa13.15□□□□□ -0.3
SDCBP-202ENST00000413219 ZNF688P0C7X2 276 aa13.15□□□□□ -0.3
SDCBP-202ENST00000413219 XGP55808 180 aa13.15□□□□□ -0.3
SDCBP-202ENST00000413219 C9orf85Q96MD7 179 aa13.15□□□□□ -0.3
SDCBP-202ENST00000413219 ODF3Q96PU9 254 aa13.15□□□□□ -0.3
SDCBP-202ENST00000413219 TMEM262E9PQX1 116 aa13.14□□□□□ -0.31
SDCBP-202ENST00000413219 GEMIN7Q9H840 131 aaKnown RBP13.14□□□□□ -0.31
SDCBP-202ENST00000413219 IGKV3-7A0A075B6H7 116 aa13.14□□□□□ -0.31
SDCBP-202ENST00000413219 TMEM223A0PJW6 202 aa13.14□□□□□ -0.31
SDCBP-202ENST00000413219 SCGB1C2P0DMR2 95 aa13.14□□□□□ -0.31
SDCBP-202ENST00000413219 CSMD1Q96PZ7 3565 aa13.13□□□□□ -0.31
SDCBP-202ENST00000413219 A0A0B4J2C4 111 aa13.13□□□□□ -0.31
SDCBP-202ENST00000413219 PF4V1P10720 104 aa13.13□□□□□ -0.31
SDCBP-202ENST00000413219 IGHV3OR16-10A0A075B7F0 116 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 IGHV3-16A0A0C4DH30 117 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 UCNP55089 124 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 ANKRD29Q8N6D5 301 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
SDCBP-202ENST00000413219 PTPRQQ9UMZ3 2332 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 TRAV12-3A0A0B4J271 114 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 A0A0J9YX75 114 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 M0QY20 66 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 IGHV3-33P01772 117 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 P0DMU3 169 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 FAM231AP0DMU4 169 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 FAM231CP0DMU5 169 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 DCANP1Q8TF63 244 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 CACNA1BQ00975 2339 aa13.12□□□□□ -0.31
SDCBP-202ENST00000413219 A4D1N5 150 aa13.11□□□□□ -0.31
SDCBP-202ENST00000413219 A6NDX4 124 aa13.11□□□□□ -0.31
SDCBP-202ENST00000413219 IGLV1-40P01703 118 aa13.11□□□□□ -0.31
SDCBP-202ENST00000413219 TRPT1Q86TN4 253 aaKnown RBP13.11□□□□□ -0.31
SDCBP-202ENST00000413219 TMEM263Q8WUH6 116 aaKnown RBP13.11□□□□□ -0.31
SDCBP-202ENST00000413219 ZNF256Q9Y2P7 627 aaPredicted RBP13.11□□□□□ -0.31
SDCBP-202ENST00000413219 SLC25A20O43772 301 aa13.1□□□□□ -0.31
SDCBP-202ENST00000413219 BRD3OSQ6XYD6 125 aa13.1□□□□□ -0.31
SDCBP-202ENST00000413219 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
SDCBP-202ENST00000413219 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.09□□□□□ -0.31
SDCBP-202ENST00000413219 C20orf203Q8NBC4 194 aa13.09□□□□□ -0.31
SDCBP-202ENST00000413219 DEFB104AQ8WTQ1 72 aa13.09□□□□□ -0.31
SDCBP-202ENST00000413219 RHODO00212 210 aa13.09□□□□□ -0.31
SDCBP-202ENST00000413219 ZNF22P17026 224 aaPredicted RBP13.09□□□□□ -0.31
SDCBP-202ENST00000413219 ZNF56Q15929 161 aa13.09□□□□□ -0.31
SDCBP-202ENST00000413219 FAM74A4Q5TZK3 123 aa13.09□□□□□ -0.31
SDCBP-202ENST00000413219 LINC01600Q96MT4 127 aa13.09□□□□□ -0.31
SDCBP-202ENST00000413219 TRAV26-1A0A087WT03 109 aa13.08□□□□□ -0.32
SDCBP-202ENST00000413219 SRD5A1P18405 259 aa13.08□□□□□ -0.32
SDCBP-202ENST00000413219 LY6EQ16553 131 aa13.08□□□□□ -0.32
SDCBP-202ENST00000413219 MED13LQ71F56 2210 aa13.08□□□□□ -0.32
SDCBP-202ENST00000413219 EIF4EBP3O60516 100 aaPredicted RBP13.08□□□□□ -0.32
SDCBP-202ENST00000413219 M0R2P5 195 aa13.07□□□□□ -0.32
SDCBP-202ENST00000413219 CFHR3Q02985 330 aa13.07□□□□□ -0.32
SDCBP-202ENST00000413219 C9JAW5 83 aa13.06□□□□□ -0.32
SDCBP-202ENST00000413219 H3BUX3 64 aa13.06□□□□□ -0.32
SDCBP-202ENST00000413219 I3L3M4 83 aa13.06□□□□□ -0.32
SDCBP-202ENST00000413219 TGFAP01135 160 aa13.06□□□□□ -0.32
SDCBP-202ENST00000413219 MUSTN1Q8IVN3 82 aa13.06□□□□□ -0.32
SDCBP-202ENST00000413219 OPRPNQ99935 248 aaPredicted RBP13.06□□□□□ -0.32
SDCBP-202ENST00000413219 ZNF580Q9UK33 172 aa13.06□□□□□ -0.32
SDCBP-202ENST00000413219 TRAV2A0A0B4J234 112 aa13.06□□□□□ -0.32
SDCBP-202ENST00000413219 RAX2Q96IS3 184 aa13.06□□□□□ -0.32
SDCBP-202ENST00000413219 SPTBN2O15020 2390 aa13.05□□□□□ -0.32
SDCBP-202ENST00000413219 IGLV4-3A0A075B6K6 122 aa13.05□□□□□ -0.32
SDCBP-202ENST00000413219 IGHV1OR15-1A0A075B7D0 117 aa13.05□□□□□ -0.32
SDCBP-202ENST00000413219 IGHV4-39P01824 125 aa13.05□□□□□ -0.32
SDCBP-202ENST00000413219 Q8N1Y9 231 aa13.05□□□□□ -0.32
SDCBP-202ENST00000413219 PTPRZ1P23471 2315 aaPredicted RBP13.05□□□□□ -0.32
SDCBP-202ENST00000413219 BLCAPP62952 87 aa13.04□□□□□ -0.32
SDCBP-202ENST00000413219 ATXN8Q156A1 80 aa13.04□□□□□ -0.32
SDCBP-202ENST00000413219 WFDC12Q8WWY7 111 aa13.04□□□□□ -0.32
SDCBP-202ENST00000413219 CLUHP3Q96NS8 147 aa13.04□□□□□ -0.32
SDCBP-202ENST00000413219 IGHV4-38-2P0DP08 117 aa13.04□□□□□ -0.32
SDCBP-202ENST00000413219 EDA2RQ9HAV5 297 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms