RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OSTCQ9NRP0 149 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 DPM3Q9P2X0 92 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 HIGD1AQ9Y241 93 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 MINOS1-NBL1R4GNA1 71 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 ARL2-SNX15V9GYD0 113 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 V9GYV3 84 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 TRRAPQ9Y4A5 3859 aa3.44□□□□□ -1.86
SF3B1-202ENST00000409915 SMIM27A0A1W2PRY6 76 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 A6NDX4 124 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 LY6LH3BQJ8 138 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 NXPH4O95158 308 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 APOMO95445 188 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 PRSS1P07477 247 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 RPL7P18124 248 aaKnown RBP3.43□□□□□ -1.86
SF3B1-202ENST00000409915 PFN2P35080 140 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 INSL3P51460 131 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 PROK1P58294 105 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 HES1Q14469 280 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 PMVKQ15126 192 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 IZUMO4Q1ZYL8 232 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 RPL39P5Q59GN2 51 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 CFAP126Q5VTH2 177 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 FAM231DQ6ZW35 169 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 SH2D6Q7Z4S9 175 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 FAM19A2Q8N3H0 131 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 GATD1Q8NB37 220 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 OR51H1Q8NH63 302 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 LINC00479Q96M42 142 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 C18orf15Q96N68 181 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 MRPL20Q9BYC9 149 aaKnown RBP3.43□□□□□ -1.86
SF3B1-202ENST00000409915 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
SF3B1-202ENST00000409915 AMMECR1Q9Y4X0 333 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-202ENST00000409915 TRBV20OR9-2A0A075B6H5 130 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 IGHV3OR16-12A0A075B7B8 117 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 TRBV6-6A0A0A6YYG2 114 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 IGHV1-3A0A0C4DH29 117 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 IGHV1-24A0A0C4DH33 117 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 IZUMO1RA6ND01 250 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 IGLL5B9A064 214 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 C11orf94C9JXX5 98 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 M0R2P5 195 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 PPYP01298 95 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 IGKV1D-33P01593 117 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 IGKV1-33P01594 117 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 ZNF688P0C7X2 276 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 SAA2P0DJI9 122 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-202ENST00000409915 LINC00694P0DN24 101 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 NMUP48645 174 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 LINC00205P59089 165 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 KRTAP10-3P60369 221 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 BLCAPP62952 87 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 ZNF816Q0VGE8 651 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-202ENST00000409915 TTC32Q5I0X7 151 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 IBA57Q5T440 356 aaKnown RBP3.42□□□□□ -1.86
SF3B1-202ENST00000409915 ATP5L2Q7Z4Y8 100 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 TEN1Q86WV5 123 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 LINC00311Q8N616 119 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 C3orf56Q8N813 242 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 LINC01006Q8NI28 216 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 CARD19Q96LW7 228 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 HSD17B10Q99714 261 aaKnown RBP3.42□□□□□ -1.86
SF3B1-202ENST00000409915 PRADC1Q9BSG0 188 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 TMEM222Q9H0R3 208 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 VSIRQ9H7M9 311 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 ZNF702PQ9H963 129 aa3.42□□□□□ -1.86
SF3B1-202ENST00000409915 TRAV8-4A0A0B4J246 113 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 IGHV3-38A0A0C4DH36 116 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 TRBV7-7A0A0K0K1E9 115 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 CLPSL1A2RUU4 121 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 C15orf61A6NNL5 157 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 OOSP1A8MZH6 123 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 DUSP14O95147 198 aaKnown RBP3.41□□□□□ -1.86
SF3B1-202ENST00000409915 P01737 135 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 ATP5G1P05496 136 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 NTF3P20783 257 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 CNTFRP26992 372 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 ATP5G3P48201 142 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 ZNF137PP52743 207 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 TAS2R45P59539 299 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 HSPE1P61604 102 aaKnown RBP3.41□□□□□ -1.86
SF3B1-202ENST00000409915 HBG1P69891 147 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 HBG2P69892 147 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 RRN3P1Q2M238 152 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 LGALS9BQ3B8N2 356 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 ABCA11PQ4W5N1 156 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 C1orf195Q5TG92 126 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 LGALS9CQ6DKI2 356 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 C10orf99Q6UWK7 81 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 ZNF833PQ6ZTB9 187 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 NFE4Q86UQ8 179 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 NUP35Q8NFH5 326 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 CHCHD10Q8WYQ3 142 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-202ENST00000409915 LINC00526Q96FQ7 95 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 KIR2DL4Q99706 377 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 NABP2Q9BQ15 211 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 IMUPQ9GZP8 106 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 ENY2Q9NPA8 101 aa3.41□□□□□ -1.86
SF3B1-202ENST00000409915 VWFP04275 2813 aa3.4□□□□□ -1.86
SF3B1-202ENST00000409915 IGKV1D-13A0A0B4J2D9 117 aa3.4□□□□□ -1.87
SF3B1-202ENST00000409915 A0A0G2JRQ6 117 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms