RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PF4V1P10720 104 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 POLR2KP53803 58 aaKnown RBP7.32□□□□□ -1.24
MSH2-202ENST00000406134 MYOZ3Q8TDC0 251 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 E9PLD3 99 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 LINC01619G3V211 115 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 H7C1H1 209 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 PSMG4Q5JS54 123 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 C2orf66Q6UXQ4 117 aa7.32□□□□□ -1.24
MSH2-202ENST00000406134 TEX15Q9BXT5 2789 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.31□□□□□ -1.24
MSH2-202ENST00000406134 K7EMT4 169 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 DUSP14O95147 198 aaKnown RBP7.31□□□□□ -1.24
MSH2-202ENST00000406134 SCGB1A1P11684 91 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 SAMD5Q5TGI4 173 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 C9orf85Q96MD7 179 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 LGALS1P09382 135 aaKnown RBP7.31□□□□□ -1.24
MSH2-202ENST00000406134 ORMDL2Q53FV1 153 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 SUMO4Q6EEV6 95 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 IGHV4-59P01825 116 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 RPL32P62910 135 aaKnown RBP7.31□□□□□ -1.24
MSH2-202ENST00000406134 DEFB104AQ8WTQ1 72 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 CITED1Q99966 193 aa7.31□□□□□ -1.24
MSH2-202ENST00000406134 ANKRD17O75179 2603 aaKnown RBP7.3□□□□□ -1.24
MSH2-202ENST00000406134 SMIM13P0DJ93 91 aa7.3□□□□□ -1.24
MSH2-202ENST00000406134 PLEKHB2Q96CS7 222 aa7.3□□□□□ -1.24
MSH2-202ENST00000406134 SPCS1Q9Y6A9 102 aa7.3□□□□□ -1.24
MSH2-202ENST00000406134 NIPBLQ6KC79 2804 aaeCLIP7.3□□□□□ -1.24
MSH2-202ENST00000406134 SCGB3A1Q96QR1 104 aa7.3□□□□□ -1.24
MSH2-202ENST00000406134 AMELXQ99217 191 aa7.3□□□□□ -1.24
MSH2-202ENST00000406134 NHP2Q9NX24 153 aaKnown RBP7.3□□□□□ -1.24
MSH2-202ENST00000406134 TSSC4Q9Y5U2 329 aaPredicted RBP7.3□□□□□ -1.24
MSH2-202ENST00000406134 IGHV3-16A0A0C4DH30 117 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 IGLL5B9A064 214 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 MGPP08493 103 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 RBMY1A1P0DJD3 496 aaKnown RBP7.29□□□□□ -1.24
MSH2-202ENST00000406134 RBMY1CP0DJD4 496 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 TSPEAR-AS2P59090 65 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 RBMY1FQ15415 496 aaKnown RBP7.29□□□□□ -1.24
MSH2-202ENST00000406134 FAM104AQ969W3 186 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 POLQO75417 2590 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 ATP5J2P56134 94 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 RPL39P62891 51 aaKnown RBP7.29□□□□□ -1.24
MSH2-202ENST00000406134 DEFB112Q30KQ8 113 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 MDFICQ9P1T7 246 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 LRRK2Q5S007 2527 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 MYMXA0A1B0GTQ4 84 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 LGALS9O00182 355 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 TAL2Q16559 108 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 C12orf74Q32Q52 190 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 PRO0461Q9UI25 63 aa7.29□□□□□ -1.24
MSH2-202ENST00000406134 AMTNQ6UX39 209 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 ZFP2Q6ZN57 461 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 A0A087WWL8 130 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 C11orf86A6NJI1 115 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 RPL11P62913 178 aaKnown RBP7.28□□□□□ -1.24
MSH2-202ENST00000406134 RNF152Q8N8N0 203 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 TRAV12-2A0A075B6T6 113 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 TRAV12-3A0A0B4J271 114 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 A0A0J9YX75 114 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 TEX48A0A1B0GUV7 120 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 GAGE12HA6NDE8 117 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 K7EQG2 157 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 FSHBP01225 129 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 S100A4P26447 101 aaKnown RBP7.28□□□□□ -1.24
MSH2-202ENST00000406134 OR5A1Q8NGJ0 315 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 ZNRF2Q8NHG8 242 aa7.28□□□□□ -1.24
MSH2-202ENST00000406134 PRADC1Q9BSG0 188 aa7.27□□□□□ -1.25
MSH2-202ENST00000406134 TRBV27A0A0K0K1C4 114 aa7.27□□□□□ -1.25
MSH2-202ENST00000406134 ODF3Q96PU9 254 aa7.27□□□□□ -1.25
MSH2-202ENST00000406134 P0DMU3 169 aa7.27□□□□□ -1.25
MSH2-202ENST00000406134 FAM231AP0DMU4 169 aa7.27□□□□□ -1.25
MSH2-202ENST00000406134 FAM231CP0DMU5 169 aa7.27□□□□□ -1.25
MSH2-202ENST00000406134 TP53TG1Q9Y2A0 90 aa7.27□□□□□ -1.25
MSH2-202ENST00000406134 TRBV6-5A0A0K0K1A5 114 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 M0QY20 66 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 Q8N1Y9 231 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 MYO9AB2RTY4 2548 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 SONP18583 2426 aaKnown RBP7.26□□□□□ -1.25
MSH2-202ENST00000406134 EIF4EBP3O60516 100 aaPredicted RBP7.26□□□□□ -1.25
MSH2-202ENST00000406134 GATA3P23771 443 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 FOXI2Q6ZQN5 318 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 SMIM20Q8N5G0 67 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 KLHL30-AS1Q8NEE0 82 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 PGPEP1Q9NXJ5 209 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 APCP25054 2843 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 B4DSR2 109 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 ZNF688P0C7X2 276 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 FABP2P12104 132 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 EMP1P54849 157 aa7.26□□□□□ -1.25
MSH2-202ENST00000406134 USP24Q9UPU5 2620 aa7.25□□□□□ -1.25
MSH2-202ENST00000406134 UBE2D1P51668 147 aa7.25□□□□□ -1.25
MSH2-202ENST00000406134 CD300EQ496F6 205 aaPredicted RBP7.25□□□□□ -1.25
MSH2-202ENST00000406134 C18orf65Q6ZTR6 163 aa7.25□□□□□ -1.25
MSH2-202ENST00000406134 ZNF702PQ9H963 129 aa7.25□□□□□ -1.25
MSH2-202ENST00000406134 CD7P09564 240 aa7.25□□□□□ -1.25
MSH2-202ENST00000406134 MAPK1IP1LQ8NDC0 245 aa7.25□□□□□ -1.25
MSH2-202ENST00000406134 NF1P21359 2839 aa7.25□□□□□ -1.25
MSH2-202ENST00000406134 J3QR89 54 aa7.25□□□□□ -1.25
MSH2-202ENST00000406134 ZNF876PQ49A33 203 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms